Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02729 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 4.3e-223 777.7 399 100.0
Actinidia30104 Actinidia chinensis HOM05D006061 ORTHO05D007450 6.5e-171 604.4 394 79.4
Rhsim13G0041800 Rhododendron simsii HOM05D006061 ORTHO05D000758 5.5e-162 574.7 486 68.1
Lj1A80G16 Lonicera japonica HOM05D006061 ORTHO05D007450 4.2e-138 495.4 395 64.8
TAR365G1230 Trochodendron aralioides HOM05D006061 ORTHO05D007450 8.0e-137 491.1 395 64.3
CSS0041718 Camellia sinensis var. sinensis HOM05D006061 ORTHO05D007450 3.4e-135 485.7 364 72.3
MD10G1171000 Malus domestica HOM05D006061 ORTHO05D007450 1.6e-129 466.8 394 62.7
Prupe.8G209500 Prunus persica HOM05D006061 ORTHO05D007450 4.7e-129 465.3 394 61.4
Thecc.01G244800 Theobroma cacao HOM05D006061 ORTHO05D007450 1.2e-127 460.7 393 61.3
Duzib138G1183 Durio zibethinus HOM05D006061 ORTHO05D007450 9.1e-125 451.1 397 61.0
MSTRG.12506 Avicennia marina HOM05D006061 ORTHO05D007450 1.9e-122 443.4 395 59.0
CiPaw.04G108700 Carya illinoinensis HOM05D006061 ORTHO05D007450 5.6e-122 441.8 394 60.9
Cfa002517 Carpinus fangiana HOM05D006061 ORTHO05D007450 9.5e-122 441.0 394 59.9
Peaxi162Scf00517g00313 Petunia axillaris HOM05D006061 ORTHO05D007450 3.6e-121 439.1 395 57.7
COL.COLO4_08163 Corchorus olitorius HOM05D006061 ORTHO05D007450 1.0e-120 437.6 399 58.6
MBI07_g08916_MAGBIO Magnolia biondii HOM05D006061 ORTHO05D007450 3.0e-120 436.0 398 57.8
SGA_v2.0_scaffold3G01591 Striga asiatica HOM05D006061 ORTHO05D007450 3.0e-120 436.0 397 59.4
PGSC0003DMG401020085 Solanum tuberosum HOM05D006061 ORTHO05D007450 5.2e-120 435.3 394 59.1
RcHm_v2.0_Chr6g0285561 Rosa chinensis HOM05D006061 ORTHO05D007450 8.9e-120 434.5 394 58.4
Gorai.007G151600 Gossypium raimondii HOM05D006061 ORTHO05D007450 3.4e-119 432.6 394 59.9
Potri.014G194800 Populus trichocarpa HOM05D006061 ORTHO05D007450 3.4e-119 432.6 394 56.9
Nn1g03086 Nelumbo nucifera HOM05D006061 ORTHO05D007450 7.5e-119 431.4 395 59.2
Gohir.D11G141300 Gossypium hirsutum HOM05D006061 ORTHO05D007450 1.1e-117 427.6 397 59.4
SalBow6G4925 Salvia bowleyana HOM05D006061 ORTHO05D007450 1.1e-117 427.6 397 58.4
Sopen06g035030 Solanum pennellii HOM05D006061 ORTHO05D007450 1.1e-117 427.6 394 58.1
Nitab4.5_0002085g0150 Nicotiana tabacum HOM05D006061 ORTHO05D007450 1.4e-117 427.2 395 57.0
Gohir.A11G135100 Gossypium hirsutum HOM05D006061 ORTHO05D007450 1.8e-117 426.8 397 59.4
Migut.N02246 Erythranthe guttata HOM05D006061 ORTHO05D007450 4.1e-117 425.6 395 55.9
Manes.12G040800 Manihot esculenta HOM05D006061 ORTHO05D007450 4.1e-117 425.6 394 58.6
Solyc06g083640.4 Solanum lycopersicum HOM05D006061 ORTHO05D007450 9.2e-117 424.5 394 57.6
Atru.chr5.1926 Acer truncatum HOM05D006061 ORTHO05D007450 2.0e-116 423.3 394 58.4
Sabra14G0142900 Salix brachista HOM05D006061 ORTHO05D007450 1.5e-114 417.2 424 52.6
CAN.G771.51 Capsicum annuum HOM05D006061 ORTHO05D007450 1.6e-113 413.7 409 55.5
FvH4_2g19870 Fragaria vesca HOM05D006061 ORTHO05D007450 2.1e-113 413.3 394 56.3
Nitab4.5_0006211g0030 Nicotiana tabacum HOM05D006061 ORTHO05D007450 2.8e-113 412.9 395 55.7
CsaV3_7G025440 Cucumis sativus L. HOM05D006061 ORTHO05D007450 1.0e-112 411.0 395 57.0
Ciclev10019392m.g Citrus clementina HOM05D006061 ORTHO05D007450 5.2e-112 408.7 394 57.9
HanXRQChr13g0409031 Helianthus annuus HOM05D006061 ORTHO05D007450 3.4e-111 406.0 395 53.7
Aqoxy5G00054 Aquilegia oxysepala HOM05D006061 ORTHO05D007450 4.4e-111 405.6 395 54.4
ClCG09G009420 Citrullus lanatus HOM05D006061 ORTHO05D007450 8.3e-110 401.4 395 54.9
AUR62008856 Chenopodium quinoa HOM05D006061 ORTHO05D007450 3.2e-109 399.4 393 54.7
FAN15G2648 Fragaria x ananassa HOM05D006061 ORTHO05D007450 2.0e-108 396.7 394 54.6
GSVIVG01028489001 Vitis vinifera HOM05D006061 ORTHO05D007450 2.0e-108 396.7 344 61.9
PGR083G1193 Punica granatum HOM05D006061 ORTHO05D007450 2.7e-108 396.4 394 54.6
Hund05498 Selenicereus undatus HOM05D006061 ORTHO05D007450 2.7e-108 396.4 394 53.3
CANSAT01G1389 Cannabis sativa HOM05D006061 ORTHO05D007450 3.5e-108 396.0 397 56.2
TWI59G0704 Tripterygium wilfordii HOM05D006061 ORTHO05D007450 7.8e-108 394.8 395 55.9
Sc05g0002480 Simmondsia chinensis HOM05D006061 ORTHO05D007450 2.3e-107 393.3 394 52.8
Haze_24749 Corylus avellana HOM05D006061 ORTHO05D007450 1.1e-106 391.0 435 51.7
Lj1g0026990 Lotus japonicus HOM05D006061 ORTHO05D007450 4.3e-106 389.0 398 55.0
Psat3g050240 Pisum sativum HOM05D006061 ORTHO05D007450 9.5e-106 387.9 397 54.4
EL10Ac7g17761 Beta vulgaris HOM05D006061 ORTHO05D007450 3.1e-104 382.9 394 52.8
THA.LOC104814544 Tarenaya hassleriana HOM05D006061 ORTHO05D007450 5.2e-104 382.1 397 53.9
Ca_08767_v3 Cicer arietinum L. HOM05D006061 ORTHO05D007450 1.2e-103 380.9 395 54.2
Eucgr.H00824 Eucalyptus grandis HOM05D006061 ORTHO05D007450 1.2e-103 380.9 394 53.3
Lsat_1_v5_gn_8_90281 Lactuca sativa HOM05D006061 ORTHO05D007450 5.8e-103 378.6 395 51.4
AUR62025388 Chenopodium quinoa HOM05D006061 ORTHO05D007450 1.7e-102 377.1 412 51.2
Phvul.001G168300 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 2.9e-102 376.3 395 54.7
C07p00980 Brassica napus HOM05D006061 ORTHO05D007450 1.2e-100 370.9 396 52.8
Ah.15g093400 Amaranthus hybridus HOM05D006061 ORTHO05D007450 1.6e-100 370.5 394 52.5
BcaC06g36697 Brassica carinata HOM05D006061 ORTHO05D007450 7.8e-100 368.2 396 52.5
A07p00530 Brassica napus HOM05D006061 ORTHO05D007450 7.8e-100 368.2 396 52.3
BolC7t40535H Brassica oleracea HOM05D006061 ORTHO05D007450 7.8e-100 368.2 396 52.5
BraA07t27847Z Brassica rapa HOM05D006061 ORTHO05D007450 7.8e-100 368.2 396 52.3
TPR.G7560 Trifolium pratense HOM05D006061 ORTHO05D007450 1.7e-99 367.1 404 53.5
Glyma.19G171100 Glycine max HOM05D006061 ORTHO05D007450 2.3e-99 366.7 395 53.9
arahy.Tifrunner.gnm1.ann1.4WTK5H Arachis hypogaea HOM05D006061 ORTHO05D007450 3.9e-99 365.9 386 53.4
arahy.Tifrunner.gnm1.ann1.J8EIPB Arachis hypogaea HOM05D006061 ORTHO05D007450 3.9e-99 365.9 386 53.4
Glyma.03G169900 Glycine max HOM05D006061 ORTHO05D007450 3.9e-99 365.9 395 54.4
Sp3g33450 Schrenkiella parvula HOM05D006061 ORTHO05D007450 3.9e-99 365.9 396 53.0
PSO170G3920 Papaver somniferum HOM05D006061 ORTHO05D007450 6.6e-99 365.2 395 49.9
Thhalv10001935m.g Eutrema salsugineum HOM05D006061 ORTHO05D007450 3.3e-98 362.8 396 53.3
BcaB03g16813 Brassica carinata HOM05D006061 ORTHO05D007450 5.6e-98 362.1 396 52.3
FAN27G0211 Fragaria x ananassa HOM05D006061 ORTHO05D007450 9.9e-95 351.3 341 56.0
AT2G20210 Arabidopsis thaliana HOM05D006061 ORTHO05D007450 1.9e-93 347.1 396 51.0
Medtr7g099450 Medicago truncatula HOM05D006061 ORTHO05D007450 9.2e-93 344.7 407 51.6
AL3G47870 Arabidopsis lyrata HOM05D006061 ORTHO05D007450 2.7e-92 343.2 396 50.3
Carub.0003s3454 Capsella rubella HOM05D006061 ORTHO05D007450 2.3e-91 340.1 396 50.0
ECA236G2978 Erigeron canadensis HOM05D006061 ORTHO05D000758 2.5e-90 336.7 400 48.8
Sed0025129 Sechium edule HOM05D006061 ORTHO05D007450 1.4e-88 330.9 316 56.0
Aa31LG8G17130 Aethionema arabicum HOM05D006061 ORTHO05D007450 6.8e-88 328.6 393 48.9
ATR0787G120 Amborella trichopoda HOM05D006061 ORTHO05D007450 3.6e-81 306.2 397 45.8
Cc01_g08490 Coffea canephora HOM05D006061 ORTHO05D007450 8.1e-81 305.1 257 60.7
VMungo1383G3365 Vigna mungo HOM05D006061 ORTHO05D007450 1.2e-79 301.2 318 54.4
Cpa.g.sc8.207 Carica papaya HOM05D006061 ORTHO05D007450 2.0e-79 300.4 277 57.4
MELO3C024149.2 Cucumis melo HOM05D006061 ORTHO05D007450 7.4e-74 282.0 277 54.9
Oeu039640.1 Olea europaea HOM05D006061 ORTHO05D007450 3.8e-70 269.6 224 62.1
CARHR110700 Cardamine hirsuta HOM05D006061 ORTHO05D007450 5.7e-58 229.2 276 50.0
SEGI_05721 Sequoiadendron giganteum HOM05D006061 ORTHO05D007450 8.4e-54 215.3 321 39.9
Lalb_Chr01g0019411 Lupinus albus HOM05D006061 ORTHO05D007450 1.2e-52 211.5 224 54.5
unitig_8.g4624 Utricularia gibba HOM05D006061 ORTHO05D007450 1.3e-51 208.0 333 39.9
Rhsim13G0055400 Rhododendron simsii HOM05D006061 ORTHO05D007450 1.0e-38 165.2 123 74.8
Lalb_Chr01g0019421 Lupinus albus HOM05D006061 ORTHO05D007450 6.5e-38 162.5 153 54.9
DCAR_004700 Daucus carota HOM05D000065 ORTHO05D007450 2.5e-37 160.6 182 50.0
Cc00_g31740 Coffea canephora HOM05D006061 ORTHO05D007450 3.0e-35 153.7 150 54.0
Pp3c7_21970 Physcomitrium patens HOM05D006061 ORTHO05D007450 1.6e-31 141.4 375 30.9
Phvul.004G074200 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 2.0e-26 124.4 173 50.3
SMO356G0042 Selaginella moellendorffii HOM05D006061 ORTHO05D007450 4.4e-26 123.2 406 30.5
Zm00001eb008990 Zea mays HOM05D006061 ORTHO05D007450 2.7e-23 114.0 149 44.3
Zm00001eb428270 Zea mays HOM05D006061 ORTHO05D007450 4.5e-23 113.2 151 45.0
CARHR174390 Cardamine hirsuta HOM05D006061 ORTHO05D007450 5.0e-22 109.8 101 52.5
Zm00001eb120120 Zea mays HOM05D006061 ORTHO05D007450 1.9e-21 107.8 125 50.4
PSO675G3076 Papaver somniferum HOM05D006061 ORTHO05D007450 1.0e-19 102.1 348 27.9
CBR_g31999 Chara braunii HOM05D006061 ORTHO05D007450 5.2e-19 99.8 361 27.4
SHI26842 Sapria himalayana HOM05D006061 ORTHO05D007450 6.8e-19 99.4 150 42.7
Cpa.g.sc8.208 Carica papaya HOM05D006061 ORTHO05D007450 2.8e-17 94.0 118 46.6
Zm00001eb399320 Zea mays HOM05D000103 ORTHO05D007450 4.5e-15 86.7 112 45.5
Zm00001eb133830 Zea mays HOM05D006061 ORTHO05D007450 8.0e-12 75.9 78 46.2
Zm00001eb068850 Zea mays HOM05D006061 ORTHO05D007450 2.3e-11 74.3 96 45.8
SHI26848 Sapria himalayana HOM05D006061 ORTHO05D007450 1.2e-10 72.0 77 53.2
SHI26843 Sapria himalayana HOM05D006061 ORTHO05D007450 2.6e-10 70.9 195 30.3


User provided reference genes

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