Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02710 Vaccinium macrocarpon HOM05D007706 ORTHO05D009593 4.9e-138 495.0 352 100.0
Rhsim13G0040100 Rhododendron simsii HOM05D007706 ORTHO05D009593 1.9e-94 350.1 391 74.4
Dinv16399 Davidia involucrata HOM05D007706 ORTHO05D009593 9.4e-49 198.4 307 48.2
CSS0048547 Camellia sinensis var. sinensis HOM05D007706 ORTHO05D009593 4.8e-45 186.0 307 50.2
Hma1.2p1_1930F.1_g307940 Hydrangea macrophylla HOM05D007706 ORTHO05D009593 3.8e-42 176.4 312 46.8
Dinv34676 Davidia involucrata HOM05D007706 ORTHO05D009593 3.7e-37 159.8 307 44.6
Potri.002G256900 Populus trichocarpa HOM05D007706 ORTHO05D009593 2.4e-36 157.1 300 44.3
Aqoxy5G00146 Aquilegia oxysepala HOM05D007706 ORTHO05D009593 7.0e-36 155.6 301 41.5
Cc01_g17810 Coffea canephora HOM05D007706 ORTHO05D009593 4.5e-35 152.9 297 39.4
Sabra02G0195300 Salix brachista HOM05D007706 ORTHO05D009593 2.9e-34 150.2 302 43.4
Lj2C1142T11 Lonicera japonica HOM05D007706 ORTHO05D009593 4.3e-33 146.4 299 43.1
PGR031G0475 Punica granatum HOM05D007706 ORTHO05D009593 7.3e-33 145.6 303 39.3
Cfa002482 Carpinus fangiana HOM05D007706 ORTHO05D009593 2.1e-32 144.1 289 44.3
Nn1g02965 Nelumbo nucifera HOM05D007706 ORTHO05D009593 2.8e-32 143.7 311 47.6
MD05G1189100 Malus domestica HOM05D007706 ORTHO05D009593 1.0e-31 141.7 294 42.9
QL09p041349 Quercus lobata HOM05D007706 ORTHO05D009593 1.8e-31 141.0 292 44.5
Nn3g19784 Nelumbo nucifera HOM05D007706 ORTHO05D009593 6.8e-31 139.0 306 38.9
Lj1g0013336 Lotus japonicus HOM05D007706 ORTHO05D009593 1.5e-30 137.9 301 39.2
PSO541G4538 Papaver somniferum HOM05D007706 ORTHO05D009593 2.0e-30 137.5 297 38.7
ECA236G0985 Erigeron canadensis HOM05D007706 ORTHO05D009593 2.6e-30 137.1 288 38.2
VMungo1383G0992 Vigna mungo HOM05D007706 ORTHO05D009593 2.6e-30 137.1 293 38.6
EL10Ac7g17683 Beta vulgaris HOM05D007706 ORTHO05D009593 1.3e-29 134.8 285 40.0
Haze_24704 Corylus avellana HOM05D007706 ORTHO05D009593 3.7e-29 133.3 293 43.0
Thecc.01G250700 Theobroma cacao HOM05D007706 ORTHO05D009593 4.9e-29 132.9 301 43.5
Prupe.8G215700 Prunus persica HOM05D007706 ORTHO05D009593 6.4e-29 132.5 296 40.9
Ca_08742_v3 Cicer arietinum L. HOM05D007706 ORTHO05D009593 1.1e-28 131.7 292 36.6
Phvul.001G164700 Phaseolus vulgaris HOM05D007706 ORTHO05D009593 1.1e-28 131.7 285 38.9
Solyc09g064630.3 Solanum lycopersicum HOM05D007706 ORTHO05D009593 1.1e-28 131.7 295 37.6
arahy.Tifrunner.gnm1.ann1.NJ5037 Arachis hypogaea HOM05D007706 ORTHO05D009593 1.4e-28 131.3 291 41.6
arahy.Tifrunner.gnm1.ann1.S77KHM Arachis hypogaea HOM05D007706 ORTHO05D009593 1.8e-28 131.0 293 41.3
Glyma.03G167200 Glycine max HOM05D007706 ORTHO05D009593 1.8e-28 131.0 282 41.1
Sopen09g025790 Solanum pennellii HOM05D007706 ORTHO05D009593 2.4e-28 130.6 297 38.0
TAR362G1069 Trochodendron aralioides HOM05D007706 ORTHO05D009593 2.4e-28 130.6 307 37.1
Manes.12G037850 Manihot esculenta HOM05D007706 ORTHO05D009593 3.2e-28 130.2 288 44.1
Glyma.19G168300 Glycine max HOM05D007706 ORTHO05D009593 1.6e-27 127.9 288 38.9
Ah.15g092610 Amaranthus hybridus HOM05D007706 ORTHO05D009593 2.0e-27 127.5 280 40.4
MBI07_g23229_MAGBIO Magnolia biondii HOM05D007706 ORTHO05D009593 2.0e-27 127.5 289 41.9
Nitab4.5_0007992g0040 Nicotiana tabacum HOM05D007706 ORTHO05D009593 2.0e-27 127.5 287 41.1
AUR62008796 Chenopodium quinoa HOM05D007706 ORTHO05D009593 2.7e-27 127.1 283 40.3
TPR.G30860 Trifolium pratense HOM05D003225 ORTHO05D003818 2.7e-27 127.1 298 36.6
PGSC0003DMG400008584 Solanum tuberosum HOM05D007706 ORTHO05D009593 5.9e-27 125.9 297 37.4
Duzib138G1124 Durio zibethinus HOM05D007706 ORTHO05D009593 7.8e-27 125.6 306 38.2
SalBow4G1824 Salvia bowleyana HOM05D007706 ORTHO05D009593 3.0e-26 123.6 291 38.8
Ca_08762_v3 Cicer arietinum L. HOM05D003225 ORTHO05D009593 5.0e-26 122.9 225 41.8
Ca_30216_v3 Cicer arietinum L. HOM05D003225 ORTHO05D003818 5.0e-26 122.9 225 41.8
Psat3g051920 Pisum sativum HOM05D007706 ORTHO05D009593 8.6e-26 122.1 278 38.8
HanXRQChr04g0108691 Helianthus annuus HOM05D007706 ORTHO05D009593 4.3e-25 119.8 283 40.3
TPR.G20053 Trifolium pratense HOM05D007706 ORTHO05D009593 4.3e-25 119.8 279 36.6
Peaxi162Scf00043g02924 Petunia axillaris HOM05D007706 ORTHO05D009593 5.6e-25 119.4 236 44.5
CiPaw.04G190500 Carya illinoinensis HOM05D007706 ORTHO05D009593 7.3e-25 119.0 310 35.5
Psat3g053960 Pisum sativum HOM05D007706 ORTHO05D009593 7.3e-25 119.0 284 37.0
Migut.N02230 Erythranthe guttata HOM05D007706 ORTHO05D009593 9.5e-25 118.6 285 40.0
Lsat_1_v5_gn_8_92000 Lactuca sativa HOM05D007706 ORTHO05D009593 9.5e-25 118.6 288 43.1
Medtr7g098450 Medicago truncatula HOM05D007706 ORTHO05D009593 1.2e-24 118.2 285 37.2
Gohir.A07G204400 Gossypium hirsutum HOM05D007706 ORTHO05D009593 2.8e-24 117.1 302 42.1
Lalb_Chr20g0113631 Lupinus albus HOM05D007706 ORTHO05D009593 3.6e-24 116.7 292 37.3
Cpa.g.sc87.26 Carica papaya HOM05D007706 ORTHO05D009593 8.0e-24 115.5 307 39.7
Duzib133G1528 Durio zibethinus HOM05D007706 ORTHO05D009593 8.0e-24 115.5 290 40.0
PSO782G3886 Papaver somniferum HOM05D006910 ORTHO05D009593 1.8e-23 114.4 281 35.2
Medtr7g099260 Medicago truncatula HOM05D007706 ORTHO05D009593 8.9e-23 112.1 290 38.6
TWI12G0795 Tripterygium wilfordii HOM05D007706 ORTHO05D009593 8.9e-23 112.1 288 42.0
Gohir.D07G210400 Gossypium hirsutum HOM05D007706 ORTHO05D009593 1.5e-22 111.3 310 41.9
RcHm_v2.0_Chr6g0286691 Rosa chinensis HOM05D007706 ORTHO05D009593 1.5e-22 111.3 294 38.4
Migut.D00475 Erythranthe guttata HOM05D007706 ORTHO05D009593 2.6e-22 110.5 293 39.6
FAN27G2030 Fragaria x ananassa HOM05D007706 ORTHO05D009593 2.6e-22 110.5 291 34.0
Gorai.001G237800 Gossypium raimondii HOM05D007706 ORTHO05D009593 2.6e-22 110.5 308 42.5
Prupe.1G049000 Prunus persica HOM05D006910 ORTHO05D008937 3.4e-22 110.2 278 38.5
PSO675G7213 Papaver somniferum HOM05D007706 ORTHO05D009593 1.3e-21 108.2 290 33.4
Eucgr.A01320 Eucalyptus grandis HOM05D007706 ORTHO05D009593 3.7e-21 106.7 319 36.1
FvH4_2g20530 Fragaria vesca HOM05D007706 ORTHO05D009593 6.4e-21 105.9 283 41.3
FAN24G1454 Fragaria x ananassa HOM05D007706 ORTHO05D009593 6.4e-21 105.9 283 41.3
GSVIVG01027919001 Vitis vinifera HOM05D006910 ORTHO05D008937 8.3e-21 105.5 306 34.6
MSTRG.18353 Avicennia marina HOM05D007706 ORTHO05D009593 1.1e-20 105.1 315 34.3
Ciclev10020687m.g Citrus clementina HOM05D007706 ORTHO05D009593 7.0e-20 102.4 295 43.1
Actinidia37550 Actinidia chinensis HOM05D006910 ORTHO05D008937 2.7e-19 100.5 217 35.0
FAN15G0362 Fragaria x ananassa HOM05D007706 ORTHO05D009593 1.3e-18 98.2 287 38.0
CiPaw.03G270700 Carya illinoinensis HOM05D007706 ORTHO05D009593 3.0e-18 97.1 306 40.2
SGA_v2.0_scaffold1G00652 Striga asiatica HOM05D007706 ORTHO05D009593 3.0e-18 97.1 292 34.9
CANSAT01G1705 Cannabis sativa HOM05D007706 ORTHO05D009593 5.0e-18 96.3 292 39.0
PSO675G2181 Papaver somniferum HOM05D007706 ORTHO05D009593 1.6e-16 91.3 222 34.7
Sopen12g010960 Solanum pennellii HOM05D000004 ORTHO05D009593 8.1e-16 89.0 189 37.6
Duzib151G0386 Durio zibethinus HOM05D006910 ORTHO05D008937 1.1e-15 88.6 313 33.9
MBI10_g26041_MAGBIO Magnolia biondii HOM05D007706 ORTHO05D009593 1.4e-15 88.2 286 32.9
Manes.03G158500 Manihot esculenta HOM05D006910 ORTHO05D008937 4.0e-15 86.7 275 32.7
HPP92_022478 Vanilla planifolia HOM05D007706 ORTHO05D009593 5.2e-15 86.3 283 32.2
MELO3C022390.2 Cucumis melo HOM05D007706 ORTHO05D009593 2.0e-14 84.3 292 37.0
Atru.chr4.1910 Acer truncatum HOM05D006910 ORTHO05D008937 2.6e-14 84.0 303 32.7
Ciclev10004771m.g Citrus clementina HOM05D006910 ORTHO05D008937 9.8e-14 82.0 272 31.6
CsaV3_6G007370 Cucumis sativus L. HOM05D007706 ORTHO05D009593 1.3e-13 81.6 285 31.9
CSS0021483 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 4.9e-13 79.7 285 32.6
Haze_11463 Corylus avellana HOM05D006910 ORTHO05D008937 8.3e-13 79.0 286 31.8
CDE05G1228 Ceratophyllum demersum HOM05D007706 ORTHO05D009593 1.4e-12 78.2 221 32.6
Gohir.A10G107300 Gossypium hirsutum HOM05D006910 ORTHO05D008937 1.4e-12 78.2 300 32.3
CSS0027831 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 3.2e-12 77.0 298 35.9
Dinv29800 Davidia involucrata HOM05D006910 ORTHO05D008937 3.2e-12 77.0 325 30.5
Gohir.D10G160000 Gossypium hirsutum HOM05D006910 ORTHO05D008937 4.1e-12 76.6 299 31.1
Sabra08G0131500 Salix brachista HOM05D006910 ORTHO05D008937 5.4e-12 76.3 302 28.5
Gorai.011G179800 Gossypium raimondii HOM05D006910 ORTHO05D008937 7.1e-12 75.9 300 31.0
CSS0004989 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 9.2e-12 75.5 286 31.5
MD16G1226800 Malus domestica HOM05D006910 ORTHO05D008937 1.6e-11 74.7 278 36.0
SEGI_40436 Sequoiadendron giganteum HOM05D052464 ORTHO05D009593 2.7e-11 73.9 311 28.3
ATR0787G077 Amborella trichopoda HOM05D007706 ORTHO05D009593 3.5e-11 73.6 282 34.4
Os03g0140700 Oryza sativa ssp. japonica HOM05D007706 ORTHO05D009593 3.5e-11 73.6 280 38.9
COL.COLO4_15971 Corchorus olitorius HOM05D006910 ORTHO05D008937 1.0e-10 72.0 273 33.0
Nitab4.5_0000845g0230 Nicotiana tabacum HOM05D007706 ORTHO05D009593 1.7e-10 71.2 85 48.2
Actinidia30125 Actinidia chinensis HOM05D007706 ORTHO05D009593 6.6e-10 69.3 62 59.7
Actinidia30127 Actinidia chinensis HOM05D007706 ORTHO05D009593 6.6e-10 69.3 74 55.4
AUR62025443 Chenopodium quinoa HOM05D006910 ORTHO05D008937 6.6e-10 69.3 108 43.5
CDE11G0528 Ceratophyllum demersum HOM05D007706 ORTHO05D009593 1.9e-09 67.8 297 27.6
vmacro15481 Vaccinium macrocarpon HOM05D006910 ORTHO05D008937 4.3e-09 66.6 173 36.4
TAR622G1049 Trochodendron aralioides HOM05D027966 ORTHO05D025782 5.6e-09 66.2 263 30.4
SalBow7G0697 Salvia bowleyana HOM05D007706 ORTHO05D009593 7.3e-09 65.9 266 31.6
COL.COLO4_10568 Corchorus olitorius HOM05D007706 ORTHO05D009593 1.2e-08 65.1 42 69.0
Oeu026810.1 Olea europaea HOM05D007706 ORTHO05D009593 2.1e-08 64.3 45 62.2
Rhsim02G0044100 Rhododendron simsii HOM05D006910 ORTHO05D008937 2.1e-08 64.3 292 33.2
Cc03_g06380 Coffea canephora HOM05D006910 ORTHO05D008937 4.7e-08 63.2 83 42.2
Lalb_Chr01g0019491 Lupinus albus HOM05D007706 ORTHO05D009593 8.1e-08 62.4 77 53.2
Peaxi162Scf00319g00521 Petunia axillaris HOM05D006910 ORTHO05D008937 8.1e-08 62.4 282 29.8
MSTRG.4175 Avicennia marina HOM05D006910 ORTHO05D008937 1.1e-07 62.0 81 42.0
Dinv27116 Davidia involucrata HOM05D006910 ORTHO05D008937 2.3e-07 60.8 87 43.7
Lj6C621T3 Lonicera japonica HOM05D006910 ORTHO05D008937 3.1e-07 60.5 83 41.0
QL06p021124 Quercus lobata HOM05D006910 ORTHO05D008937 4.0e-07 60.1 179 29.6
PSO478G1200 Papaver somniferum HOM05D006910 ORTHO05D009593 1.5e-06 58.2 47 59.6
Oeu011215.1 Olea europaea HOM05D006910 ORTHO05D008937 2.0e-06 57.8 82 42.7
Hma1.2p1_0112F.1_g054780 Hydrangea macrophylla HOM05D006910 ORTHO05D008937 2.6e-06 57.4 35 68.6
CiPaw.01G177500 Carya illinoinensis HOM05D006910 ORTHO05D008937 3.4e-06 57.0 36 66.7
Sabra10G0041700 Salix brachista HOM05D006910 ORTHO05D008937 3.4e-06 57.0 35 71.4
Cpa.g.sc59.4 Carica papaya HOM05D006910 ORTHO05D008937 4.4e-06 56.6 178 30.9
DCAR_027350 Daucus carota HOM05D006910 ORTHO05D008937 4.4e-06 56.6 36 63.9
Hund00522 Selenicereus undatus HOM05D001903 ORTHO05D001847 4.4e-06 56.6 44 54.5
Eucgr.C04231 Eucalyptus grandis HOM05D001903 ORTHO05D001847 9.9e-06 55.5 47 48.9


User provided reference genes

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