Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02518 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 6.2e-76 287.3 141 100.0
vmacro04594 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 3.5e-71 271.6 134 98.5
CSS0022820 Camellia sinensis var. sinensis HOM05D006058 ORTHO05D007686 3.0e-70 268.5 141 92.2
Hma1.2p1_1049F.1_g251900 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 2.3e-62 242.3 141 80.9
Hma1.2p1_0399F.1_g144340 Hydrangea macrophylla HOM05D006058 ORTHO05D007686 8.7e-62 240.4 141 80.9
Oeu032852.1 Olea europaea HOM05D006058 ORTHO05D007686 1.1e-61 240.0 134 86.6
RcHm_v2.0_Chr6g0292311 Rosa chinensis HOM05D006058 ORTHO05D007686 3.3e-61 238.4 135 82.2
Eucgr.H01614 Eucalyptus grandis HOM05D006058 ORTHO05D007686 7.3e-61 237.3 140 80.0
FvH4_2g24470 Fragaria vesca HOM05D006058 ORTHO05D007686 7.3e-61 237.3 135 83.0
FAN24G0575 Fragaria x ananassa HOM05D006058 ORTHO05D007686 7.3e-61 237.3 135 83.0
FAN27G3183 Fragaria x ananassa HOM05D006058 ORTHO05D007686 7.3e-61 237.3 135 83.0
Sc26g0003460 Simmondsia chinensis HOM05D006058 ORTHO05D007686 4.8e-60 234.6 136 80.9
Manes.07G087200 Manihot esculenta HOM05D006058 ORTHO05D007686 8.1e-60 233.8 136 82.4
Psat4g228760 Pisum sativum HOM05D006058 ORTHO05D007686 1.1e-59 233.4 138 78.3
DCAR_018372 Daucus carota HOM05D006058 ORTHO05D007686 1.4e-59 233.0 139 79.1
GSVIVG01011025001 Vitis vinifera HOM05D006058 ORTHO05D007686 1.4e-59 233.0 138 79.0
Rhsim13G0018500 Rhododendron simsii HOM05D003625 ORTHO05D004382 2.4e-59 232.3 120 93.3
PGR119G2453 Punica granatum HOM05D006058 ORTHO05D007686 3.1e-59 231.9 140 80.0
MD04G1200100 Malus domestica HOM05D006058 ORTHO05D007686 5.3e-59 231.1 141 79.4
Duzib211G0114 Durio zibethinus HOM05D006058 ORTHO05D007686 9.0e-59 230.3 135 80.7
Prupe.8G268000 Prunus persica HOM05D006058 ORTHO05D007686 9.0e-59 230.3 139 79.1
Actinidia00707 Actinidia chinensis HOM05D006058 ORTHO05D007686 1.2e-58 229.9 122 91.0
Nn4g26080 Nelumbo nucifera HOM05D006058 ORTHO05D007686 1.2e-58 229.9 136 79.4
TAR636G0052 Trochodendron aralioides HOM05D006058 ORTHO05D007686 2.0e-58 229.2 136 81.6
Peaxi162Scf00273g00034 Petunia axillaris HOM05D006058 ORTHO05D007686 2.6e-58 228.8 133 80.5
Ca_03230_v3 Cicer arietinum L. HOM05D006058 ORTHO05D007686 3.4e-58 228.4 138 77.5
Nitab4.5_0001499g0140 Nicotiana tabacum HOM05D006058 ORTHO05D007686 5.8e-58 227.6 136 79.4
Nitab4.5_0009592g0010 Nicotiana tabacum HOM05D006058 ORTHO05D007686 5.8e-58 227.6 136 78.7
Thecc.01G288100 Theobroma cacao HOM05D006058 ORTHO05D007686 7.6e-58 227.3 136 77.9
MD12G1212600 Malus domestica HOM05D006058 ORTHO05D007686 9.9e-58 226.9 141 78.0
Lj2g0026207 Lotus japonicus HOM05D006058 ORTHO05D007686 1.3e-57 226.5 135 77.8
TPR.G16722 Trifolium pratense HOM05D006058 ORTHO05D007686 3.8e-57 224.9 138 74.6
TWI23G1093 Tripterygium wilfordii HOM05D006058 ORTHO05D007686 4.9e-57 224.6 136 80.1
CANSAT25G3509 Cannabis sativa HOM05D006058 ORTHO05D007686 6.4e-57 224.2 134 76.9
Gohir.A12G007700 Gossypium hirsutum HOM05D006058 ORTHO05D007686 6.4e-57 224.2 136 75.0
Lalb_Chr07g0187491 Lupinus albus HOM05D006058 ORTHO05D007686 8.4e-57 223.8 137 78.8
Potri.014G083500 Populus trichocarpa HOM05D006058 ORTHO05D007686 8.4e-57 223.8 137 75.9
Ah.10g033440 Amaranthus hybridus HOM05D006058 ORTHO05D007686 1.1e-56 223.4 136 76.5
Sabra02G0198900 Salix brachista HOM05D006058 ORTHO05D007686 1.1e-56 223.4 137 76.6
Aqoxy4G03219 Aquilegia oxysepala HOM05D006058 ORTHO05D007686 1.4e-56 223.0 135 79.3
Nitab4.5_0004672g0030 Nicotiana tabacum HOM05D006058 ORTHO05D007686 1.9e-56 222.6 136 77.9
SGA_v2.0_scaffold130G34295 Striga asiatica HOM05D006058 ORTHO05D007686 2.4e-56 222.2 132 81.1
TPR.G8807 Trifolium pratense HOM05D006058 ORTHO05D007686 3.2e-56 221.9 138 73.2
Gohir.D12G007100 Gossypium hirsutum HOM05D006058 ORTHO05D007686 7.1e-56 220.7 136 73.5
HanXRQChr03g0093951 Helianthus annuus HOM05D006058 ORTHO05D007686 7.1e-56 220.7 140 75.0
Peaxi162Scf00026g00313 Petunia axillaris HOM05D006058 ORTHO05D007686 9.3e-56 220.3 136 79.4
Hund02088 Selenicereus undatus HOM05D006058 ORTHO05D007686 9.3e-56 220.3 136 75.7
Medtr3g010210 Medicago truncatula HOM05D006058 ORTHO05D007686 1.2e-55 219.9 138 73.2
MELO3C015303.2 Cucumis melo HOM05D006058 ORTHO05D007686 1.6e-55 219.5 137 77.4
CsaV3_1G038790 Cucumis sativus L. HOM05D006058 ORTHO05D007686 1.6e-55 219.5 137 77.4
AUR62036672 Chenopodium quinoa HOM05D006058 ORTHO05D007686 2.1e-55 219.2 136 75.7
MBI07_g41269_MAGBIO Magnolia biondii HOM05D006058 ORTHO05D007686 2.7e-55 218.8 136 77.9
Glyma.01G089000 Glycine max HOM05D006058 ORTHO05D007686 3.5e-55 218.4 135 76.3
Glyma.04G146600 Glycine max HOM05D006058 ORTHO05D007686 3.5e-55 218.4 135 76.3
CDE02G3716 Ceratophyllum demersum HOM05D006058 ORTHO05D007686 1.0e-54 216.9 137 73.0
COL.COLO4_08051 Corchorus olitorius HOM05D006058 ORTHO05D007686 1.0e-54 216.9 136 77.2
Gorai.008G007300 Gossypium raimondii HOM05D006058 ORTHO05D007686 1.0e-54 216.9 133 73.7
PSO407G0089 Papaver somniferum HOM05D006058 ORTHO05D007686 1.0e-54 216.9 138 76.8
CiPaw.07G098200 Carya illinoinensis HOM05D006058 ORTHO05D007686 1.8e-54 216.1 136 77.9
PSO170G2912 Papaver somniferum HOM05D006058 ORTHO05D007686 3.0e-54 215.3 138 75.4
Cfa006057 Carpinus fangiana HOM05D006058 ORTHO05D007686 6.7e-54 214.2 136 75.7
Ciclev10022776m.g Citrus clementina HOM05D006058 ORTHO05D007686 6.7e-54 214.2 138 76.1
Lju470C11T9 Lonicera japonica HOM05D006058 ORTHO05D007686 6.7e-54 214.2 135 78.5
Prupe.3G123100 Prunus persica HOM05D006058 ORTHO05D007686 8.7e-54 213.8 138 77.5
unitig_0.g1187 Utricularia gibba HOM05D006058 ORTHO05D007686 2.5e-53 212.2 133 72.2
Atru.chr5.1299 Acer truncatum HOM05D006058 ORTHO05D007686 4.3e-53 211.5 138 75.4
TPR.G22635 Trifolium pratense HOM05D006058 ORTHO05D007686 4.3e-53 211.5 138 71.0
HanXRQChr15g0476421 Helianthus annuus HOM05D006058 ORTHO05D007686 1.6e-52 209.5 141 72.3
Cc01_g20070 Coffea canephora HOM05D006058 ORTHO05D007686 2.8e-52 208.8 142 71.8
Phvul.002G050500 Phaseolus vulgaris HOM05D006058 ORTHO05D007686 3.6e-52 208.4 136 70.6
QL12p042454 Quercus lobata HOM05D006058 ORTHO05D007686 1.4e-51 206.5 136 74.3
SalBow3G0902 Salvia bowleyana HOM05D006058 ORTHO05D007686 4.0e-51 204.9 132 72.7
Hund29081 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.5e-50 203.0 127 74.8
Hund29083 Selenicereus undatus HOM05D006058 ORTHO05D007686 1.5e-50 203.0 127 74.8
BcaC01g02630 Brassica carinata HOM05D006058 ORTHO05D007686 3.8e-49 198.4 134 68.7
A06p30300 Brassica napus HOM05D006058 ORTHO05D007686 3.8e-49 198.4 136 67.6
C03p62750 Brassica napus HOM05D006058 ORTHO05D007686 3.8e-49 198.4 134 68.7
Solyc12g014020.2 Solanum lycopersicum HOM05D006058 ORTHO05D007686 3.8e-49 198.4 121 80.2
Sopen12g005770 Solanum pennellii HOM05D006058 ORTHO05D007686 3.8e-49 198.4 121 80.2
BraA06t25979Z Brassica rapa HOM05D006058 ORTHO05D007686 6.4e-49 197.6 136 67.6
BolC3t18529H Brassica oleracea HOM05D006058 ORTHO05D007686 1.1e-48 196.8 134 67.9
Prupe.8G250400 Prunus persica HOM05D006058 ORTHO05D007686 1.4e-48 196.4 106 84.9
PGSC0003DMG400015370 Solanum tuberosum HOM05D006058 ORTHO05D007686 1.9e-48 196.1 121 79.3
SHI14488 Sapria himalayana HOM05D006058 ORTHO05D007686 2.4e-48 195.7 139 69.8
Carub.0008s2446 Capsella rubella HOM05D006058 ORTHO05D007686 5.5e-48 194.5 140 65.0
Thhalv10005102m.g Eutrema salsugineum HOM05D006058 ORTHO05D007686 5.5e-48 194.5 136 68.4
HPP92_016068 Vanilla planifolia HOM05D006058 ORTHO05D007686 5.5e-48 194.5 135 68.1
Nn3g21231 Nelumbo nucifera HOM05D006058 ORTHO05D007686 7.1e-48 194.1 116 78.4
AT5G63690 Arabidopsis thaliana HOM05D006058 ORTHO05D007686 9.3e-48 193.7 134 66.4
CARHR277600 Cardamine hirsuta HOM05D006058 ORTHO05D007686 1.2e-47 193.4 135 68.9
AL8G40840 Arabidopsis lyrata HOM05D006058 ORTHO05D007686 2.1e-47 192.6 134 67.9
THA.LOC104826323 Tarenaya hassleriana HOM05D006058 ORTHO05D007686 2.1e-47 192.6 136 68.4
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 2.7e-47 192.2 119 75.6
BcaB02g09737 Brassica carinata HOM05D006058 ORTHO05D007686 4.6e-47 191.4 138 65.9
Sp2g26790 Schrenkiella parvula HOM05D006058 ORTHO05D007686 4.6e-47 191.4 138 66.7
BolC2t12363H Brassica oleracea HOM05D006058 ORTHO05D007686 6.0e-47 191.0 137 66.4
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 1.0e-46 190.3 119 74.8
BcaC03g18221 Brassica carinata HOM05D006058 ORTHO05D007686 1.0e-46 190.3 137 66.4
Aa31LG10G11090 Aethionema arabicum HOM05D006058 ORTHO05D007686 1.3e-46 189.9 134 67.2
SEGI_21939 Sequoiadendron giganteum HOM05D006058 ORTHO05D007686 1.8e-46 189.5 138 63.8
EL10Ac7g17168 Beta vulgaris HOM05D006058 ORTHO05D007686 2.3e-46 189.1 136 66.2
A02p42950 Brassica napus HOM05D006058 ORTHO05D007686 8.7e-46 187.2 137 65.7
Migut.D00240 Erythranthe guttata HOM05D006058 ORTHO05D007686 1.9e-45 186.0 141 66.0
Manes.10G061700 Manihot esculenta HOM05D006058 ORTHO05D007686 1.9e-45 186.0 130 71.5
BcaB07g29701 Brassica carinata HOM05D006058 ORTHO05D007686 3.3e-45 185.3 137 65.7
Eucgr.H01617 Eucalyptus grandis HOM05D006058 ORTHO05D007686 9.6e-45 183.7 138 65.9
C02p62900 Brassica napus HOM05D006058 ORTHO05D007686 1.3e-44 183.3 137 64.2
ClCG03G017360 Citrullus lanatus HOM05D006058 ORTHO05D007686 1.6e-44 183.0 108 80.6
Zm00001eb106990 Zea mays HOM05D006058 ORTHO05D007686 1.4e-43 179.9 140 62.1
BraA02t09218Z Brassica rapa HOM05D006058 ORTHO05D007686 3.1e-43 178.7 132 64.4
Sed0020474 Sechium edule HOM05D006058 ORTHO05D007686 2.0e-42 176.0 108 77.8
VMungo1215G3318 Vigna mungo HOM05D006058 ORTHO05D007686 2.2e-41 172.6 116 68.1
ECA240G0292 Erigeron canadensis HOM05D006058 ORTHO05D007686 8.4e-41 170.6 125 68.0
CAN.G964.10 Capsicum annuum HOM05D006058 ORTHO05D007686 5.5e-40 167.9 131 64.1
AagrBONN_evm.TU.Sc2ySwM_369.269 Anthoceros agrestis HOM05D006058 ORTHO05D007686 2.4e-35 152.5 133 51.9
AUR62034597 Chenopodium quinoa HOM05D006058 ORTHO05D007686 3.4e-34 148.7 98 72.4
Mapoly0068s0046 Marchantia polymorpha HOM05D006058 ORTHO05D007686 3.4e-34 148.7 116 57.8
Mapoly0122s0023 Marchantia polymorpha HOM05D006058 ORTHO05D007686 4.5e-34 148.3 120 55.0
SMO244G0033 Selaginella moellendorffii HOM05D006058 ORTHO05D007686 4.5e-34 148.3 129 54.3
EL10Ac3g06921 Beta vulgaris HOM05D006058 ORTHO05D007686 1.3e-33 146.7 92 75.0
Pp3c3_34830 Physcomitrium patens HOM05D006058 ORTHO05D007686 1.7e-33 146.4 131 52.7
CBR_g26410 Chara braunii HOM05D006058 ORTHO05D007686 2.9e-33 145.6 126 54.0
ATR0225G019 Amborella trichopoda HOM05D006058 ORTHO05D007686 6.5e-33 144.4 110 63.6
BolC4t22707H Brassica oleracea HOM05D006058 ORTHO05D007686 1.1e-32 143.7 104 62.5
TAR365G0318 Trochodendron aralioides HOM05D006058 ORTHO05D007686 1.4e-32 143.3 82 78.0
Sc05g0004330 Simmondsia chinensis HOM05D006058 ORTHO05D007686 6.1e-31 137.9 86 73.3
Aa31LG1G18150 Aethionema arabicum HOM05D000706 ORTHO05D001554 7.4e-29 131.0 85 69.4
MBI07_g41268_MAGBIO Magnolia biondii HOM05D002731 ORTHO05D003073 8.5e-25 117.5 90 64.4
CBR_g24266 Chara braunii HOM05D006058 ORTHO05D007686 1.1e-24 117.1 119 45.4
vmacro09159 Vaccinium macrocarpon HOM05D006058 ORTHO05D007686 4.1e-19 98.6 73 67.1
QL12p023442 Quercus lobata HOM05D006058 ORTHO05D007686 3.0e-14 82.4 87 51.7
CAN.G27.69 Capsicum annuum HOM05D005779 ORTHO05D007040 7.2e-08 61.2 43 65.1
CsaV3_7G018800 Cucumis sativus L. HOM05D006058 ORTHO05D000001 3.0e-06 55.8 43 58.1


User provided reference genes

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