Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02508 Vaccinium macrocarpon HOM05D007479 ORTHO05D009416 3.9e-123 444.9 238 100.0
Rhsim13G0017200 Rhododendron simsii HOM05D007479 ORTHO05D009416 1.7e-54 216.9 242 58.3
CSS0048836 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 6.2e-44 181.8 244 48.4
CSS0010600 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 2.0e-42 176.8 220 51.4
CSS0014944 Camellia sinensis var. sinensis HOM05D007479 ORTHO05D009416 2.0e-42 176.8 220 51.4
Actinidia00698 Actinidia chinensis HOM05D007479 ORTHO05D009416 2.9e-41 172.9 246 49.6
TWI59G0977 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 1.6e-36 157.1 207 46.9
TWI59G1446 Tripterygium wilfordii HOM05D007479 ORTHO05D009416 1.6e-36 157.1 207 46.9
GSVIVG01011009001 Vitis vinifera HOM05D007479 ORTHO05D009416 1.6e-36 157.1 247 44.1
Oeu047908.1 Olea europaea HOM05D007479 ORTHO05D009416 3.6e-36 156.0 91 81.3
Thecc.01G290200 Theobroma cacao HOM05D007479 ORTHO05D009416 4.7e-36 155.6 208 46.2
Haze_04810 Corylus avellana HOM05D007479 ORTHO05D009416 6.2e-36 155.2 247 44.9
Duzib133G1271 Durio zibethinus HOM05D007479 ORTHO05D009416 6.2e-36 155.2 187 48.1
Atru.chr5.1282 Acer truncatum HOM05D007479 ORTHO05D009416 8.1e-36 154.8 214 44.9
Gohir.D08G080200 Gossypium hirsutum HOM05D007479 ORTHO05D009416 1.8e-35 153.7 213 45.5
Gorai.004G085300 Gossypium raimondii HOM05D007479 ORTHO05D009416 1.8e-35 153.7 213 45.5
MD00G1056400 Malus domestica HOM05D007479 ORTHO05D009416 4.0e-35 152.5 89 83.1
Ciclev10022531m.g Citrus clementina HOM05D007479 ORTHO05D009416 1.2e-34 151.0 90 80.0
Hma1.2p1_0209F.1_g089110 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 2.6e-34 149.8 85 84.7
CARHR251580 Cardamine hirsuta HOM05D007479 ORTHO05D009416 3.4e-34 149.4 235 39.6
Hma1.2p1_0209F.1_g089100 Hydrangea macrophylla HOM05D007479 ORTHO05D009416 3.4e-34 149.4 84 85.7
CiPaw.07G099900 Carya illinoinensis HOM05D007479 ORTHO05D009416 4.4e-34 149.1 171 51.5
AUR62034613 Chenopodium quinoa HOM05D007479 ORTHO05D009416 4.4e-34 149.1 103 69.9
Gohir.A08G072000 Gossypium hirsutum HOM05D007479 ORTHO05D009416 4.4e-34 149.1 89 80.9
EL10Ac7g17366 Beta vulgaris HOM05D007479 ORTHO05D009416 7.6e-34 148.3 91 79.1
FvH4_2g24710 Fragaria vesca HOM05D007479 ORTHO05D009416 7.6e-34 148.3 89 78.7
FAN20G0962 Fragaria x ananassa HOM05D007479 ORTHO05D009416 7.6e-34 148.3 89 78.7
FAN24G3263 Fragaria x ananassa HOM05D000112 ORTHO05D000564 7.6e-34 148.3 89 78.7
Manes.01G213600 Manihot esculenta HOM05D007479 ORTHO05D009416 7.6e-34 148.3 238 42.0
QL12p023941 Quercus lobata HOM05D007479 ORTHO05D009416 7.6e-34 148.3 89 78.7
COL.COLO4_08032 Corchorus olitorius HOM05D007479 ORTHO05D009416 1.3e-33 147.5 173 49.1
Thhalv10029006m.g Eutrema salsugineum HOM05D007479 ORTHO05D009416 1.3e-33 147.5 204 42.6
TAR362G0341 Trochodendron aralioides HOM05D007479 ORTHO05D009416 1.3e-33 147.5 173 48.6
AL6G49780 Arabidopsis lyrata HOM05D007479 ORTHO05D009416 1.7e-33 147.1 209 42.1
C09p02570 Brassica napus HOM05D007479 ORTHO05D009416 1.7e-33 147.1 213 40.4
HanXRQChr11g0350171 Helianthus annuus HOM05D007479 ORTHO05D009416 1.7e-33 147.1 108 65.7
Aqoxy2G03133 Aquilegia oxysepala HOM05D007479 ORTHO05D009416 2.2e-33 146.7 215 42.3
BolC9t53187H Brassica oleracea HOM05D007479 ORTHO05D009416 2.2e-33 146.7 216 39.8
CANSAT25G0138 Cannabis sativa HOM05D007479 ORTHO05D009416 2.2e-33 146.7 167 49.1
FAN27G0664 Fragaria x ananassa HOM05D007479 ORTHO05D009416 2.2e-33 146.7 89 77.5
Lj2P1185T15 Lonicera japonica HOM05D007479 ORTHO05D009416 2.2e-33 146.7 86 80.2
Nitab4.5_0002093g0220 Nicotiana tabacum HOM05D007479 ORTHO05D009416 2.2e-33 146.7 173 49.7
BcaB01g01976 Brassica carinata HOM05D007479 ORTHO05D009416 2.9e-33 146.4 222 39.2
A09p02470 Brassica napus HOM05D007479 ORTHO05D009416 2.9e-33 146.4 213 40.4
BraA09t35894Z Brassica rapa HOM05D007479 ORTHO05D009416 2.9e-33 146.4 213 40.4
Cfa006037 Carpinus fangiana HOM05D007479 ORTHO05D009416 2.9e-33 146.4 89 78.7
Eucgr.K03432 Eucalyptus grandis HOM05D007479 ORTHO05D009416 2.9e-33 146.4 92 75.0
Glyma.19G206000 Glycine max HOM05D007479 ORTHO05D009416 2.9e-33 146.4 85 82.4
Prupe.8G252200 Prunus persica HOM05D007479 ORTHO05D009416 2.9e-33 146.4 91 79.1
AUR62036657 Chenopodium quinoa HOM05D007479 ORTHO05D009416 4.9e-33 145.6 88 77.3
RcHm_v2.0_Chr6g0292541 Rosa chinensis HOM05D007479 ORTHO05D009416 4.9e-33 145.6 89 77.5
MSTRG.12593 Avicennia marina HOM05D007479 ORTHO05D009416 6.4e-33 145.2 87 79.3
Cpa.g.sc9.160 Carica papaya HOM05D007479 ORTHO05D009416 6.4e-33 145.2 247 40.5
Phvul.001G201900 Phaseolus vulgaris HOM05D007479 ORTHO05D009416 6.4e-33 145.2 85 81.2
Nitab4.5_0004150g0020 Nicotiana tabacum HOM05D007479 ORTHO05D009416 8.4e-33 144.8 173 49.1
VMungo1383G0484 Vigna mungo HOM05D007479 ORTHO05D009416 1.1e-32 144.4 85 81.2
MBI19_g32765_MAGBIO Magnolia biondii HOM05D007479 ORTHO05D009416 1.4e-32 144.1 232 40.1
Carub.0006s3390 Capsella rubella HOM05D007479 ORTHO05D009416 1.9e-32 143.7 223 38.6
MELO3C015894.2 Cucumis melo HOM05D007479 ORTHO05D009416 1.9e-32 143.7 88 79.5
Peaxi162Scf01039g00126 Petunia axillaris HOM05D007479 ORTHO05D009416 1.9e-32 143.7 171 49.1
ClCG09G006510 Citrullus lanatus HOM05D007479 ORTHO05D009416 2.4e-32 143.3 88 78.4
ECA236G2582 Erigeron canadensis HOM05D007479 ORTHO05D009416 2.4e-32 143.3 111 63.1
Lsat_1_v5_gn_8_55221 Lactuca sativa HOM05D007479 ORTHO05D009416 2.4e-32 143.3 90 74.4
PGR044G0517 Punica granatum HOM05D007479 ORTHO05D009416 2.4e-32 143.3 89 74.2
arahy.Tifrunner.gnm1.ann1.5G1G6M Arachis hypogaea HOM05D007479 ORTHO05D009416 3.2e-32 142.9 85 78.8
Sp6g03190 Schrenkiella parvula HOM05D007479 ORTHO05D009416 3.2e-32 142.9 88 75.0
Ca_09112_v3 Cicer arietinum L. HOM05D000335 ORTHO05D001251 5.4e-32 142.1 85 80.0
Psat3g024840 Pisum sativum HOM05D007479 ORTHO05D009416 5.4e-32 142.1 86 79.1
Potri.014G135400 Populus trichocarpa HOM05D007479 ORTHO05D009416 5.4e-32 142.1 86 77.9
Sabra14G0101000 Salix brachista HOM05D007479 ORTHO05D009416 7.1e-32 141.7 88 76.1
Hund18029 Selenicereus undatus HOM05D007479 ORTHO05D009416 7.1e-32 141.7 91 73.6
AT4G03150 Arabidopsis thaliana HOM05D007479 ORTHO05D009416 9.2e-32 141.4 88 72.7
CsaV3_7G028280 Cucumis sativus L. HOM05D007479 ORTHO05D009416 1.2e-31 141.0 88 77.3
Migut.N01396 Erythranthe guttata HOM05D007479 ORTHO05D009416 1.6e-31 140.6 87 74.7
PGSC0003DMG400024042 Solanum tuberosum HOM05D007479 ORTHO05D009416 1.6e-31 140.6 171 46.2
TPR.G32316 Trifolium pratense HOM05D007479 ORTHO05D009416 1.6e-31 140.6 87 75.9
Lj1g0024237 Lotus japonicus HOM05D007479 ORTHO05D009416 2.1e-31 140.2 85 78.8
Medtr7g107680 Medicago truncatula HOM05D007479 ORTHO05D009416 2.1e-31 140.2 87 74.7
Solyc06g084470.4 Solanum lycopersicum HOM05D007479 ORTHO05D009416 2.1e-31 140.2 171 46.8
Sopen06g035860 Solanum pennellii HOM05D007479 ORTHO05D009416 2.1e-31 140.2 171 46.8
Cc01_g20220 Coffea canephora HOM05D007479 ORTHO05D009416 2.7e-31 139.8 87 74.7
SGA_v2.0_scaffold172G39060 Striga asiatica HOM05D007479 ORTHO05D009416 2.7e-31 139.8 87 75.9
Sed0025615 Sechium edule HOM05D007479 ORTHO05D009416 3.5e-31 139.4 88 76.1
Lalb_Chr18g0047491 Lupinus albus HOM05D007479 ORTHO05D009416 4.6e-31 139.0 85 77.6
Nn3g21272 Nelumbo nucifera HOM05D007479 ORTHO05D009416 3.9e-30 136.0 161 49.1
DCAR_002787 Daucus carota HOM05D007479 ORTHO05D009416 5.1e-30 135.6 94 68.1
HPP92_010636 Vanilla planifolia HOM05D007479 ORTHO05D009416 5.1e-30 135.6 84 76.2
SalBow6G0786 Salvia bowleyana HOM05D007479 ORTHO05D009416 1.1e-29 134.4 91 71.4
THA.LOC104826012 Tarenaya hassleriana HOM05D007479 ORTHO05D009416 1.1e-29 134.4 87 73.6
Os12g0534100 Oryza sativa ssp. japonica HOM05D007479 ORTHO05D009416 1.9e-29 133.7 86 72.1
SalBow8G4180 Salvia bowleyana HOM05D007479 ORTHO05D009416 5.6e-29 132.1 87 73.6
PSO572G0003 Papaver somniferum HOM05D007479 ORTHO05D009416 9.6e-29 131.3 88 76.1
PSO832G0938 Papaver somniferum HOM05D007479 ORTHO05D009416 9.6e-29 131.3 88 76.1
PSO832G2794 Papaver somniferum HOM05D007479 ORTHO05D009416 9.6e-29 131.3 88 76.1
CDE09G0484 Ceratophyllum demersum HOM05D007479 ORTHO05D009416 1.2e-28 131.0 85 72.9
PSO210G3923 Papaver somniferum HOM05D007479 ORTHO05D009416 1.2e-28 131.0 174 46.6
Sc17g0003550 Simmondsia chinensis HOM05D007479 ORTHO05D009416 2.8e-28 129.8 112 60.7
unitig_21.g20281 Utricularia gibba HOM05D007479 ORTHO05D009416 3.6e-28 129.4 83 74.7
ATR0706G261 Amborella trichopoda HOM05D001702 ORTHO05D001791 2.2e-25 120.2 83 63.9
CBR_g22325 Chara braunii HOM05D007479 ORTHO05D009416 1.4e-24 117.5 93 59.1
Mapoly0029s0155 Marchantia polymorpha HOM05D007479 ORTHO05D009416 1.7e-22 110.5 85 60.0
Mapoly0275s0001 Marchantia polymorpha HOM05D007479 ORTHO05D009416 1.7e-22 110.5 85 60.0
Pp3c5_13320 Physcomitrium patens HOM05D007479 ORTHO05D009416 5.1e-22 109.0 85 57.6
AagrBONN_evm.TU.Sc2ySwM_368.764 Anthoceros agrestis HOM05D007479 ORTHO05D009416 6.6e-22 108.6 83 57.8
Dinv32992 Davidia involucrata HOM05D007479 ORTHO05D009416 7.1e-08 62.0 43 62.8


User provided reference genes

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