Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02468 Vaccinium macrocarpon HOM05D001496 ORTHO05D007453 2.7e-250 868.2 441 100.0
Rhsim13G0012500 Rhododendron simsii HOM05D001496 ORTHO05D007453 1.7e-228 795.8 441 90.2
Actinidia24335 Actinidia chinensis HOM05D001496 ORTHO05D007453 7.8e-210 733.8 441 82.5
CSS0045492 Camellia sinensis var. sinensis HOM05D001496 ORTHO05D007453 2.8e-199 698.7 441 79.4
Hma1.2p1_0209F.1_g088590 Hydrangea macrophylla HOM05D001496 ORTHO05D007453 8.1e-191 670.6 423 79.7
GSVIVG01027976001 Vitis vinifera HOM05D001496 ORTHO05D007453 1.7e-188 662.9 441 75.5
Prupe.8G258400 Prunus persica HOM05D001496 ORTHO05D007453 4.2e-187 658.3 444 75.7
TAR365G0358 Trochodendron aralioides HOM05D001496 ORTHO05D007453 9.3e-187 657.1 441 75.1
HanXRQChr12g0382731 Helianthus annuus HOM05D001496 ORTHO05D007453 1.2e-186 656.8 438 74.7
Atru.chr5.1181 Acer truncatum HOM05D001496 ORTHO05D007453 2.1e-186 656.0 438 74.4
TWI14G0104 Tripterygium wilfordii HOM05D001496 ORTHO05D007453 7.9e-186 654.1 439 74.5
Cfa005950 Carpinus fangiana HOM05D001496 ORTHO05D007453 5.6e-184 647.9 434 74.4
Lj2C1190T13 Lonicera japonica HOM05D001496 ORTHO05D007453 9.6e-184 647.1 441 74.4
FAN15G3342 Fragaria x ananassa HOM05D001496 ORTHO05D007453 1.3e-183 646.7 443 73.4
Cpa.g.sc9.209 Carica papaya HOM05D001496 ORTHO05D007453 2.1e-183 646.0 418 77.8
PGSC0003DMG400011393 Solanum tuberosum HOM05D001496 ORTHO05D007453 8.1e-183 644.0 444 73.4
Eucgr.H01160 Eucalyptus grandis HOM05D001496 ORTHO05D007453 1.4e-182 643.3 437 73.7
Haze_04897 Corylus avellana HOM05D001496 ORTHO05D007453 1.2e-181 640.2 443 73.4
MD11G1304600 Malus domestica HOM05D001496 ORTHO05D007453 1.5e-181 639.8 445 72.4
Potri.014G131600 Populus trichocarpa HOM05D001496 ORTHO05D007453 2.0e-181 639.4 432 74.5
FAN24G2787 Fragaria x ananassa HOM05D001496 ORTHO05D007453 2.6e-181 639.0 434 73.3
Sopen09g029720 Solanum pennellii HOM05D001496 ORTHO05D007453 4.5e-181 638.3 440 73.0
Aqoxy2G02984 Aquilegia oxysepala HOM05D001496 ORTHO05D007453 5.8e-181 637.9 414 76.3
Solyc09g074900.4 Solanum lycopersicum HOM05D001496 ORTHO05D007453 5.8e-181 637.9 440 73.2
Migut.D00196 Erythranthe guttata HOM05D001496 ORTHO05D007453 9.9e-181 637.1 414 76.8
Manes.05G064100 Manihot esculenta HOM05D001496 ORTHO05D007453 1.1e-179 633.6 443 72.5
Dinv19717 Davidia involucrata HOM05D001496 ORTHO05D007453 2.5e-179 632.5 399 80.7
Nitab4.5_0005474g0020 Nicotiana tabacum HOM05D001496 ORTHO05D007453 2.5e-179 632.5 437 72.5
Glyma.19G210000 Glycine max HOM05D001496 ORTHO05D007453 4.2e-179 631.7 441 73.5
arahy.Tifrunner.gnm1.ann1.RVL32D Arachis hypogaea HOM05D001496 ORTHO05D007453 9.3e-179 630.6 440 72.7
RcHm_v2.0_Chr6g0293561 Rosa chinensis HOM05D001496 ORTHO05D007453 2.1e-178 629.4 443 70.9
CAN.G339.32 Capsicum annuum HOM05D001496 ORTHO05D007453 2.7e-178 629.0 444 71.2
Duzib133G1333 Durio zibethinus HOM05D001496 ORTHO05D007453 2.7e-178 629.0 437 70.9
Sabra14G0097800 Salix brachista HOM05D001496 ORTHO05D007453 3.5e-178 628.6 432 73.1
Thecc.01G297200 Theobroma cacao HOM05D001496 ORTHO05D007453 1.0e-177 627.1 438 72.8
Ciclev10020260m.g Citrus clementina HOM05D001496 ORTHO05D007453 1.8e-177 626.3 440 71.4
arahy.Tifrunner.gnm1.ann1.D4F8D3 Arachis hypogaea HOM05D001496 ORTHO05D007453 2.3e-177 625.9 440 72.3
CANSAT25G1124 Cannabis sativa HOM05D001496 ORTHO05D007453 2.3e-177 625.9 433 71.4
PSO170G1216 Papaver somniferum HOM05D001496 ORTHO05D007453 3.9e-177 625.2 422 71.8
SalBow3G1333 Salvia bowleyana HOM05D001496 ORTHO05D007453 3.9e-177 625.2 432 72.0
Lalb_Chr04g0259811 Lupinus albus HOM05D001496 ORTHO05D007453 1.1e-176 623.6 440 70.2
Glyma.03G213200 Glycine max HOM05D001496 ORTHO05D007453 4.3e-176 621.7 428 73.8
Aa31LG1G29100 Aethionema arabicum HOM05D001496 ORTHO05D007453 5.6e-176 621.3 440 72.7
Ca_09147_v3 Cicer arietinum L. HOM05D001496 ORTHO05D007453 9.6e-176 620.5 442 70.8
TPR.G9626 Trifolium pratense HOM05D001496 ORTHO05D007453 9.6e-176 620.5 442 70.8
Lj1g0019023 Lotus japonicus HOM05D001496 ORTHO05D007453 2.1e-175 619.4 435 71.3
Psat3g022520 Pisum sativum HOM05D001496 ORTHO05D007453 1.8e-174 616.3 416 73.8
CiPaw.07G106500 Carya illinoinensis HOM05D001496 ORTHO05D007453 3.1e-174 615.5 440 72.0
Medtr7g108620 Medicago truncatula HOM05D001496 ORTHO05D007453 3.1e-174 615.5 440 69.8
DCAR_002814 Daucus carota HOM05D001496 ORTHO05D007453 1.5e-173 613.2 419 72.1
AL4G47330 Arabidopsis lyrata HOM05D001496 ORTHO05D007453 3.4e-173 612.1 427 71.7
THA.LOC104802172 Tarenaya hassleriana HOM05D001496 ORTHO05D007453 5.8e-173 611.3 431 71.5
MELO3C016018.2 Cucumis melo HOM05D001496 ORTHO05D007453 7.6e-173 610.9 434 69.4
Gohir.D12G011100 Gossypium hirsutum HOM05D001496 ORTHO05D007453 7.6e-173 610.9 421 72.7
Cc01_g20650 Coffea canephora HOM05D001496 ORTHO05D007453 2.2e-172 609.4 440 72.5
Gorai.008G011100 Gossypium raimondii HOM05D001496 ORTHO05D007453 2.2e-172 609.4 431 71.5
CsaV3_7G029100 Cucumis sativus L. HOM05D001496 ORTHO05D007453 4.9e-172 608.2 434 68.7
Gohir.A12G010700 Gossypium hirsutum HOM05D001496 ORTHO05D007453 1.1e-171 607.1 431 71.0
Lsat_1_v5_gn_5_190521 Lactuca sativa HOM05D001496 ORTHO05D007453 1.9e-171 606.3 432 70.8
ClCG09G006040 Citrullus lanatus HOM05D001496 ORTHO05D007453 5.5e-171 604.7 457 67.2
Nitab4.5_0000619g0030 Nicotiana tabacum HOM05D001496 ORTHO05D007453 5.5e-171 604.7 501 63.7
Thhalv10001458m.g Eutrema salsugineum HOM05D001496 ORTHO05D007453 7.9e-170 600.9 429 70.9
ECA248G3024 Erigeron canadensis HOM05D001496 ORTHO05D007453 1.3e-169 600.1 420 72.1
Carub.0004s3047 Capsella rubella HOM05D001496 ORTHO05D007453 6.7e-169 597.8 438 68.0
EL10Ac2g04497 Beta vulgaris HOM05D001496 ORTHO05D007453 7.4e-168 594.3 424 70.3
Hund16196 Selenicereus undatus HOM05D001496 ORTHO05D007453 7.4e-168 594.3 438 69.2
Sc10g0000910 Simmondsia chinensis HOM05D001496 ORTHO05D007453 2.2e-167 592.8 413 70.9
BcaB02g08748 Brassica carinata HOM05D001496 ORTHO05D007453 1.4e-166 590.1 428 70.1
Peaxi162Scf00067g02528 Petunia axillaris HOM05D001496 ORTHO05D007453 1.4e-166 590.1 440 68.4
unitig_0.g1180 Utricularia gibba HOM05D001496 ORTHO05D007453 3.1e-166 589.0 441 67.8
AT2G47760 Arabidopsis thaliana HOM05D001496 ORTHO05D007453 1.0e-164 583.9 394 73.9
Oeu048346.1 Olea europaea HOM05D001496 ORTHO05D007453 1.0e-164 583.9 538 59.7
Sp4g29690 Schrenkiella parvula HOM05D001496 ORTHO05D007453 1.3e-164 583.6 438 68.0
AUR62023251 Chenopodium quinoa HOM05D001496 ORTHO05D007453 5.0e-164 581.6 417 70.7
A05p00200 Brassica napus HOM05D001496 ORTHO05D007453 1.9e-163 579.7 455 66.8
AUR62023205 Chenopodium quinoa HOM05D001496 ORTHO05D007453 4.2e-163 578.6 444 67.3
Sed0004349 Sechium edule HOM05D001496 ORTHO05D007453 1.2e-162 577.0 388 71.9
Nn7g38144 Nelumbo nucifera HOM05D001496 ORTHO05D007453 6.1e-162 574.7 414 69.6
BcaC02g12544 Brassica carinata HOM05D001496 ORTHO05D007453 1.4e-161 573.5 419 70.2
HPP92_016896 Vanilla planifolia HOM05D001496 ORTHO05D007453 6.7e-161 571.2 408 69.6
CDE02G4632 Ceratophyllum demersum HOM05D001496 ORTHO05D007453 1.7e-159 566.6 436 66.7
Lalb_Chr04g0259801 Lupinus albus HOM05D001496 ORTHO05D007453 1.7e-159 566.6 416 67.3
C04p00120 Brassica napus HOM05D001496 ORTHO05D007453 2.8e-159 565.8 436 67.7
Zm00001eb122900 Zea mays HOM05D001496 ORTHO05D007453 8.2e-159 564.3 406 68.2
PGR119G0252 Punica granatum HOM05D001496 ORTHO05D007453 1.0e-156 557.4 413 70.0
PGR119G1256 Punica granatum HOM05D001496 ORTHO05D007453 1.0e-156 557.4 413 70.0
TAR633G2480 Trochodendron aralioides HOM05D001496 ORTHO05D007453 1.0e-156 557.4 370 77.6
COL.COLO4_23374 Corchorus olitorius HOM05D001496 ORTHO05D007453 1.4e-153 547.0 391 71.9
ATR0796G343 Amborella trichopoda HOM05D001496 ORTHO05D007453 4.4e-152 542.0 385 68.1
Phvul.001G205800 Phaseolus vulgaris HOM05D001496 ORTHO05D007453 7.4e-152 541.2 364 75.0
QL12p027136 Quercus lobata HOM05D001496 ORTHO05D007453 1.8e-150 536.6 371 73.9
Pp3c10_8510 Physcomitrium patens HOM05D001496 ORTHO05D007453 6.3e-143 511.5 408 63.0
Hma1.2p1_0209F.1_g088600 Hydrangea macrophylla HOM05D001496 ORTHO05D007453 9.1e-142 507.7 419 64.7
Mapoly0077s0004 Marchantia polymorpha HOM05D001496 ORTHO05D007453 2.0e-141 506.5 404 61.6
FvH4_2g25370 Fragaria vesca HOM05D001496 ORTHO05D007453 1.6e-138 496.9 333 73.6
AagrBONN_evm.TU.Sc2ySwM_368.922 Anthoceros agrestis HOM05D001496 ORTHO05D007453 2.1e-130 469.9 399 60.7
SMO111G0159 Selaginella moellendorffii HOM05D001496 ORTHO05D007453 2.0e-128 463.4 398 57.8
CARHR143130 Cardamine hirsuta HOM05D001496 ORTHO05D007453 5.7e-128 461.8 323 71.5
SGA_v2.0_scaffold1G00377 Striga asiatica HOM05D000802 ORTHO05D001074 2.5e-123 446.4 436 58.0
BraA05t19016Z Brassica rapa HOM05D001496 ORTHO05D007453 2.6e-120 436.4 318 70.4
HPP92_016892 Vanilla planifolia HOM05D001496 ORTHO05D007453 2.3e-113 413.3 304 66.4
TAR633G0725 Trochodendron aralioides HOM05D001496 ORTHO05D007453 1.1e-110 404.4 308 69.5
CBR_g23454 Chara braunii HOM05D001496 ORTHO05D007453 4.6e-109 399.1 393 55.0
Ah.16g101380 Amaranthus hybridus HOM05D001496 ORTHO05D007453 7.3e-107 391.7 322 65.8
FAN20G0671 Fragaria x ananassa HOM05D001496 ORTHO05D007453 2.3e-100 370.2 353 57.2
FAN15G0073 Fragaria x ananassa HOM05D001496 ORTHO05D007453 1.0e-92 344.7 227 78.4
MCO05G420 Micromonas commoda HOM05D001496 ORTHO05D007453 2.3e-92 343.6 391 49.4
MD03G1285200 Malus domestica HOM05D001496 ORTHO05D007453 4.4e-88 329.3 229 75.5
MD03G1285100 Malus domestica HOM05D001496 ORTHO05D007453 1.3e-84 317.8 219 69.4
PRCOL_00006487 Prasinoderma coloniale HOM05D001496 ORTHO05D007453 6.2e-74 282.3 389 44.7
Haze_26252 Corylus avellana HOM05D001496 ORTHO05D007453 3.4e-64 250.0 391 40.4
Gohir.A05G239300 Gossypium hirsutum HOM05D001496 ORTHO05D007453 1.9e-54 217.6 144 74.3
COL.COLO4_15168 Corchorus olitorius HOM05D001496 ORTHO05D007453 2.1e-53 214.2 120 85.0
COL.COLO4_05649 Corchorus olitorius HOM05D001496 ORTHO05D007453 3.1e-49 200.3 111 85.6
Gohir.A01G111300 Gossypium hirsutum HOM05D001496 ORTHO05D007453 3.2e-46 190.3 128 73.4
Gohir.A02G071100 Gossypium hirsutum HOM05D001496 ORTHO05D007453 7.9e-45 185.7 128 71.9
Gohir.A12G153600 Gossypium hirsutum HOM05D001496 ORTHO05D007453 1.5e-43 181.4 128 70.3
Gohir.A07G160700 Gossypium hirsutum HOM05D001496 ORTHO05D007453 9.7e-35 152.1 103 75.7
Os01g0172000 Oryza sativa ssp. japonica HOM05D001496 ORTHO05D007453 6.3e-34 149.4 131 57.3
A03p26050 Brassica napus HOM05D000073 ORTHO05D000033 3.8e-31 140.2 98 69.4
BraA03t11820Z Brassica rapa HOM05D001496 ORTHO05D007453 3.8e-31 140.2 98 69.4
Actinidia02729 Actinidia chinensis HOM05D001496 ORTHO05D007453 5.3e-25 119.8 237 43.9
FAN27G2092 Fragaria x ananassa HOM05D001496 ORTHO05D007453 7.0e-25 119.4 92 63.0
MBI19_g29447_MAGBIO Magnolia biondii HOM05D001496 ORTHO05D007453 7.0e-25 119.4 68 80.9
SEGI_31251 Sequoiadendron giganteum HOM05D001496 ORTHO05D007453 1.7e-23 114.8 84 63.1
MBI14_g09685_MAGBIO Magnolia biondii HOM05D001496 ORTHO05D007453 8.5e-23 112.5 98 59.2
BolC3t15455H Brassica oleracea HOM05D001496 ORTHO05D007453 4.0e-20 103.6 110 53.6
SEGI_39661 Sequoiadendron giganteum HOM05D001496 ORTHO05D007453 1.5e-19 101.7 77 57.1
C03p31050 Brassica napus HOM05D001496 ORTHO05D007453 2.2e-18 97.8 112 51.8
QL02p058842 Quercus lobata HOM05D001496 ORTHO05D000125 3.5e-16 90.5 49 77.6
HanXRQChr05g0138141 Helianthus annuus HOM05D001496 ORTHO05D007453 8.0e-13 79.3 43 81.4
QL02p059219 Quercus lobata HOM05D001496 ORTHO05D007453 1.0e-12 79.0 51 70.6
Gohir.A01G167500 Gossypium hirsutum HOM05D001496 ORTHO05D047734 1.3e-10 72.0 41 80.5


User provided reference genes

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