Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02452 Vaccinium macrocarpon HOM05D002674 ORTHO05D008041 7.0e-102 374.0 196 100.0
Rhsim13G0010400 Rhododendron simsii HOM05D002674 ORTHO05D008041 4.5e-40 168.7 161 65.2
Actinidia32214 Actinidia chinensis HOM05D002674 ORTHO05D008041 1.2e-32 144.1 161 57.8
CSS0018179 Camellia sinensis var. sinensis HOM05D002674 ORTHO05D008041 2.5e-30 136.3 161 54.0
Oeu048338.1 Olea europaea HOM05D002674 ORTHO05D008041 4.6e-29 132.1 155 54.8
TAR636G2182 Trochodendron aralioides HOM05D002674 ORTHO05D008041 6.0e-29 131.7 160 51.9
Dinv19696 Davidia involucrata HOM05D002674 ORTHO05D008041 1.3e-28 130.6 161 54.7
Nn3g21482 Nelumbo nucifera HOM05D002674 ORTHO05D008041 3.0e-28 129.4 170 51.2
COL.COLO4_23349 Corchorus olitorius HOM05D002674 ORTHO05D008041 5.1e-28 128.6 156 53.2
MSTRG.21632 Avicennia marina HOM05D002674 ORTHO05D008041 8.7e-28 127.9 157 53.5
Cc01_g20820 Coffea canephora HOM05D002674 ORTHO05D008041 1.5e-27 127.1 166 51.8
Dinv33053 Davidia involucrata HOM05D002674 ORTHO05D007700 2.5e-27 126.3 166 51.2
SGA_v2.0_scaffold2G01395 Striga asiatica HOM05D002674 ORTHO05D008041 2.5e-27 126.3 155 52.9
Thecc.01G300000 Theobroma cacao HOM05D002674 ORTHO05D008041 2.5e-27 126.3 156 53.8
Peaxi162Scf00001g00445 Petunia axillaris HOM05D002674 ORTHO05D008041 5.6e-27 125.2 157 52.2
Nitab4.5_0008207g0030 Nicotiana tabacum HOM05D002674 ORTHO05D008041 7.4e-27 124.8 157 52.2
Nitab4.5_0001879g0010 Nicotiana tabacum HOM05D002674 ORTHO05D008041 9.6e-27 124.4 155 52.3
SalBow3G0298 Salvia bowleyana HOM05D002674 ORTHO05D008041 9.6e-27 124.4 156 51.9
CAN.G472.1 Capsicum annuum HOM05D002674 ORTHO05D008041 1.6e-26 123.6 161 52.2
PGR044G1069 Punica granatum HOM05D002674 ORTHO05D008041 1.6e-26 123.6 153 51.0
Manes.01G218700 Manihot esculenta HOM05D002674 ORTHO05D008041 3.7e-26 122.5 155 50.3
TWI14G1447 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 3.7e-26 122.5 156 51.9
Atru.chr7.1564 Acer truncatum HOM05D002674 ORTHO05D008041 6.2e-26 121.7 156 50.6
Gohir.D08G085400 Gossypium hirsutum HOM05D002674 ORTHO05D008041 6.2e-26 121.7 155 51.0
Psat6g166360 Pisum sativum HOM05D002674 ORTHO05D008041 6.2e-26 121.7 156 51.9
Gohir.A08G076000 Gossypium hirsutum HOM05D002674 ORTHO05D008041 8.2e-26 121.3 155 50.3
Solyc09g075100.3 Solanum lycopersicum HOM05D002674 ORTHO05D008041 8.2e-26 121.3 157 51.0
Sopen09g029920 Solanum pennellii HOM05D002674 ORTHO05D008041 8.2e-26 121.3 157 51.0
Atru.chr5.1150 Acer truncatum HOM05D002674 ORTHO05D008041 1.4e-25 120.6 154 50.6
Ciclev10022953m.g Citrus clementina HOM05D002674 ORTHO05D008041 1.4e-25 120.6 156 48.7
Migut.D00216 Erythranthe guttata HOM05D002674 ORTHO05D008041 1.4e-25 120.6 155 51.0
ClCG10G010910 Citrullus lanatus HOM05D002674 ORTHO05D008041 1.8e-25 120.2 156 49.4
CiPaw.07G108500 Carya illinoinensis HOM05D002674 ORTHO05D008041 2.4e-25 119.8 151 51.7
Ah.15g093210 Amaranthus hybridus HOM05D002674 ORTHO05D008041 3.1e-25 119.4 188 43.6
CANSAT25G0502 Cannabis sativa HOM05D002674 ORTHO05D008041 3.1e-25 119.4 153 49.0
ECA247G1692 Erigeron canadensis HOM05D002674 ORTHO05D008041 3.1e-25 119.4 157 50.3
MD11G1310400 Malus domestica HOM05D002674 ORTHO05D008041 3.1e-25 119.4 153 50.3
Potri.014G129800 Populus trichocarpa HOM05D002674 ORTHO05D008041 3.1e-25 119.4 156 50.0
Sabra02G0154500 Salix brachista HOM05D002674 ORTHO05D008041 3.1e-25 119.4 156 50.0
PGSC0003DMG400011376 Solanum tuberosum HOM05D002674 ORTHO05D008041 3.1e-25 119.4 157 50.3
Cpa.g.sc9.264 Carica papaya HOM05D002674 ORTHO05D008041 4.0e-25 119.0 155 50.3
QL12p028510 Quercus lobata HOM05D002674 ORTHO05D008041 4.0e-25 119.0 151 51.7
FvH4_2g25692 Fragaria vesca HOM05D002674 ORTHO05D008041 6.9e-25 118.2 153 51.0
FvH4_3g17380 Fragaria vesca HOM05D002674 ORTHO05D008041 1.2e-24 117.5 154 50.0
FAN11G2206 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.2e-24 117.5 154 50.0
HanXRQChr15g0465661 Helianthus annuus HOM05D002674 ORTHO05D008041 1.2e-24 117.5 157 48.4
Glyma.10G018500 Glycine max HOM05D002674 ORTHO05D008041 1.5e-24 117.1 159 47.8
Duzib133G1209 Durio zibethinus HOM05D002674 ORTHO05D007700 2.0e-24 116.7 156 50.0
FAN16G1943 Fragaria x ananassa HOM05D002674 ORTHO05D008041 3.4e-24 115.9 154 49.4
FAN21G2416 Fragaria x ananassa HOM05D002674 ORTHO05D008041 3.4e-24 115.9 154 49.4
Lalb_Chr21g0306851 Lupinus albus HOM05D002674 ORTHO05D008041 4.5e-24 115.5 157 48.4
Phvul.007G146200 Phaseolus vulgaris HOM05D002674 ORTHO05D008041 4.5e-24 115.5 156 48.7
VMungo0720G1979 Vigna mungo HOM05D002674 ORTHO05D008041 4.5e-24 115.5 156 49.4
SalBow3G1515 Salvia bowleyana HOM05D002674 ORTHO05D008041 5.8e-24 115.2 90 70.0
TWI23G1311 Tripterygium wilfordii HOM05D002674 ORTHO05D008041 5.8e-24 115.2 156 49.4
Eucgr.H01115 Eucalyptus grandis HOM05D002674 ORTHO05D008041 7.6e-24 114.8 156 48.1
Lj5g0008305 Lotus japonicus HOM05D002674 ORTHO05D008041 7.6e-24 114.8 157 49.0
Sed0019690 Sechium edule HOM05D002674 ORTHO05D008041 1.0e-23 114.4 154 48.1
Duzib138G1033 Durio zibethinus HOM05D002674 ORTHO05D008041 1.3e-23 114.0 79 77.2
RcHm_v2.0_Chr6g0293971 Rosa chinensis HOM05D002674 ORTHO05D008041 1.3e-23 114.0 153 49.7
Aa31LG10G16570 Aethionema arabicum HOM05D002674 ORTHO05D008041 1.7e-23 113.6 156 45.5
MELO3C017957.2 Cucumis melo HOM05D002674 ORTHO05D008041 1.7e-23 113.6 154 46.1
Thhalv10006327m.g Eutrema salsugineum HOM05D002674 ORTHO05D008041 1.7e-23 113.6 156 46.2
FAN25G1445 Fragaria x ananassa HOM05D002674 ORTHO05D008041 1.7e-23 113.6 149 48.3
Medtr1g088550 Medicago truncatula HOM05D002674 ORTHO05D008041 1.7e-23 113.6 157 48.4
Sp5g00710 Schrenkiella parvula HOM05D002674 ORTHO05D008041 1.7e-23 113.6 156 45.5
EL10Ac7g17468 Beta vulgaris HOM05D002674 ORTHO05D008041 2.2e-23 113.2 155 48.4
Ca_10338_v3 Cicer arietinum L. HOM05D002674 ORTHO05D008041 2.2e-23 113.2 156 49.4
CDE12G0521 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 2.9e-23 112.8 152 47.4
Hund18156 Selenicereus undatus HOM05D002674 ORTHO05D008041 2.9e-23 112.8 153 49.0
SalBow5G2922 Salvia bowleyana HOM05D002674 ORTHO05D008041 3.8e-23 112.5 94 67.0
Aqoxy5G00753 Aquilegia oxysepala HOM05D002674 ORTHO05D008041 6.5e-23 111.7 162 47.5
BcaC02g10314 Brassica carinata HOM05D002674 ORTHO05D008041 6.5e-23 111.7 155 45.2
A04p00510 Brassica napus HOM05D002674 ORTHO05D008041 6.5e-23 111.7 155 45.2
BolC4t24576H Brassica oleracea HOM05D002674 ORTHO05D008041 6.5e-23 111.7 155 45.2
BraA04t15771Z Brassica rapa HOM05D002674 ORTHO05D008041 6.5e-23 111.7 155 45.2
Cfa005915 Carpinus fangiana HOM05D002674 ORTHO05D008041 6.5e-23 111.7 149 47.0
Haze_04934 Corylus avellana HOM05D002674 ORTHO05D008041 6.5e-23 111.7 151 49.0
CsaV3_4G000790 Cucumis sativus L. HOM05D002674 ORTHO05D008041 6.5e-23 111.7 154 44.8
HPP92_013721 Vanilla planifolia HOM05D002674 ORTHO05D008041 6.5e-23 111.7 177 42.9
unitig_61.g26303 Utricularia gibba HOM05D002674 ORTHO05D008041 8.4e-23 111.3 154 46.8
Prupe.8G261100 Prunus persica HOM05D002674 ORTHO05D008041 1.1e-22 110.9 153 48.4
AL5G45590 Arabidopsis lyrata HOM05D002674 ORTHO05D008041 1.4e-22 110.5 156 46.2
Carub.0005s2947 Capsella rubella HOM05D002674 ORTHO05D008041 1.4e-22 110.5 156 44.9
PGR119G0614 Punica granatum HOM05D002674 ORTHO05D008041 1.4e-22 110.5 152 48.7
Gorai.004G089900 Gossypium raimondii HOM05D002674 ORTHO05D008041 1.9e-22 110.2 78 75.6
C04p30420 Brassica napus HOM05D002674 ORTHO05D008041 2.5e-22 109.8 155 44.5
CARHR173080 Cardamine hirsuta HOM05D002674 ORTHO05D008041 2.5e-22 109.8 154 44.8
BcaC07g42733 Brassica carinata HOM05D002674 ORTHO05D008041 3.2e-22 109.4 156 44.9
MBI19_g25355_MAGBIO Magnolia biondii HOM05D002674 ORTHO05D008041 3.2e-22 109.4 159 45.3
arahy.Tifrunner.gnm1.ann1.9NAT9F Arachis hypogaea HOM05D002674 ORTHO05D008041 5.5e-22 108.6 155 45.2
arahy.Tifrunner.gnm1.ann1.UV7MYU Arachis hypogaea HOM05D002674 ORTHO05D008041 5.5e-22 108.6 155 45.2
GSVIVG01028011001 Vitis vinifera HOM05D002674 ORTHO05D008041 5.5e-22 108.6 154 46.1
AUR62033146 Chenopodium quinoa HOM05D002674 ORTHO05D008041 7.1e-22 108.2 155 46.5
Lsat_1_v5_gn_9_5640 Lactuca sativa HOM05D002674 ORTHO05D008643 7.1e-22 108.2 78 74.4
AT3G62810 Arabidopsis thaliana HOM05D002674 ORTHO05D008041 1.6e-21 107.1 156 44.2
AUR62008625 Chenopodium quinoa HOM05D002674 ORTHO05D008041 1.6e-21 107.1 155 45.8
MD03G1287900 Malus domestica HOM05D002674 ORTHO05D008041 2.1e-21 106.7 153 47.1
PSO210G6076 Papaver somniferum HOM05D002674 ORTHO05D008041 4.6e-21 105.5 78 69.2
PSO832G1306 Papaver somniferum HOM05D002674 ORTHO05D008041 6.0e-21 105.1 78 70.5
BcaB02g08097 Brassica carinata HOM05D002674 ORTHO05D008041 7.9e-21 104.8 155 43.9
Sc24g0003780 Simmondsia chinensis HOM05D002674 ORTHO05D008041 1.8e-20 103.6 77 72.7
TPR.G34008 Trifolium pratense HOM05D002674 ORTHO05D008041 1.8e-20 103.6 156 46.8
ATR0796G030 Amborella trichopoda HOM05D002674 ORTHO05D008041 2.3e-20 103.2 153 41.2
CDE01G0164 Ceratophyllum demersum HOM05D002674 ORTHO05D008041 2.3e-20 103.2 76 71.1
Glyma.02G018200 Glycine max HOM05D002674 ORTHO05D008041 3.0e-20 102.8 83 67.5
BraA09t40877Z Brassica rapa HOM05D002674 ORTHO05D008041 3.9e-20 102.4 156 44.2
Haze_04957 Corylus avellana HOM05D002674 ORTHO05D008041 3.9e-20 102.4 76 73.7
Hma1.2p1_0491F.1_g164520 Hydrangea macrophylla HOM05D002674 ORTHO05D008041 1.5e-19 100.5 78 67.9
A09p54660 Brassica napus HOM05D002674 ORTHO05D008041 5.7e-19 98.6 156 42.9
DCAR_002831 Daucus carota HOM05D000067 ORTHO05D001807 9.7e-19 97.8 76 71.1
Oeu010670.1 Olea europaea HOM05D002674 ORTHO05D008041 2.8e-18 96.3 78 70.5
Sabra14G0096400 Salix brachista HOM05D002674 ORTHO05D008041 3.1e-17 92.8 152 40.8
Os05g0363600 Oryza sativa ssp. japonica HOM05D002674 ORTHO05D008041 6.9e-17 91.7 155 42.6
Zm00001eb346590 Zea mays HOM05D002674 ORTHO05D008041 1.3e-15 87.4 155 41.3
Mapoly0061s0038 Marchantia polymorpha HOM05D002674 ORTHO05D008041 2.9e-15 86.3 97 48.5
SEGI_38702 Sequoiadendron giganteum HOM05D002674 ORTHO05D008041 2.5e-14 83.2 78 51.3
Lalb_Chr02g0143261 Lupinus albus HOM05D000266 ORTHO05D008041 3.2e-14 82.8 138 42.8
AagrBONN_evm.TU.Sc2ySwM_362.373 Anthoceros agrestis HOM05D002674 ORTHO05D008041 8.8e-12 74.7 79 49.4
RcHm_v2.0_Chr2g0146991 Rosa chinensis HOM05D002674 ORTHO05D008041 5.7e-11 72.0 54 72.2
Peaxi162Scf00545g00027 Petunia axillaris HOM05D002674 ORTHO05D008041 2.2e-10 70.1 55 63.6
C08p37560 Brassica napus HOM05D002674 ORTHO05D008041 3.7e-10 69.3 60 65.0
Pp3c9_7930 Physcomitrium patens HOM05D002674 ORTHO05D008041 3.7e-10 69.3 77 46.8
CBR_g24042 Chara braunii HOM05D002674 ORTHO05D008041 1.8e-09 67.0 77 45.5
PSO832G3862 Papaver somniferum HOM05D001297 ORTHO05D001135 8.5e-07 58.2 75 48.0


User provided reference genes

Program Settings