Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02447 Vaccinium macrocarpon HOM05D006737 ORTHO05D008418 2.2e-185 652.1 322 100.0
Rhsim13G0009900 Rhododendron simsii HOM05D006737 ORTHO05D008418 8.4e-145 517.3 333 79.3
CSS0030900 Camellia sinensis var. sinensis HOM05D006737 ORTHO05D008418 6.9e-131 471.1 326 75.2
Cfa005906 Carpinus fangiana HOM05D006737 ORTHO05D008418 1.3e-121 440.3 313 70.0
Nn3g21504 Nelumbo nucifera HOM05D006737 ORTHO05D008418 2.5e-120 436.0 320 68.4
GSVIVG01028025001 Vitis vinifera HOM05D006737 ORTHO05D008418 3.5e-119 432.2 316 67.7
Haze_04944 Corylus avellana HOM05D006737 ORTHO05D008418 4.6e-119 431.8 311 68.8
Prupe.8G262100 Prunus persica HOM05D006737 ORTHO05D008418 2.8e-116 422.5 314 67.8
Atru.chr5.1140 Acer truncatum HOM05D006737 ORTHO05D008418 3.7e-116 422.2 315 65.7
TAR365G0544 Trochodendron aralioides HOM05D006737 ORTHO05D008418 4.8e-116 421.8 329 66.9
FAN24G1027 Fragaria x ananassa HOM05D006737 ORTHO05D008418 1.1e-115 420.6 313 68.4
FAN15G3576 Fragaria x ananassa HOM05D006737 ORTHO05D008418 2.4e-115 419.5 313 68.1
FvH4_2g25800 Fragaria vesca HOM05D006737 ORTHO05D008418 3.1e-115 419.1 313 68.1
MD11G1309100 Malus domestica HOM05D006737 ORTHO05D008418 3.1e-115 419.1 314 68.5
Ciclev10021225m.g Citrus clementina HOM05D006737 ORTHO05D008418 5.3e-115 418.3 313 66.1
FAN27G1696 Fragaria x ananassa HOM05D006737 ORTHO05D008418 1.5e-114 416.8 321 66.4
RcHm_v2.0_Chr6g0294111 Rosa chinensis HOM05D006737 ORTHO05D008418 1.5e-114 416.8 319 66.1
Manes.01G219800 Manihot esculenta HOM05D006737 ORTHO05D008418 5.9e-114 414.8 322 64.3
CiPaw.07G109800 Carya illinoinensis HOM05D006737 ORTHO05D008418 1.3e-113 413.7 348 62.6
MD03G1288800 Malus domestica HOM05D006737 ORTHO05D008418 1.3e-113 413.7 315 65.7
Potri.002G203900 Populus trichocarpa HOM05D006737 ORTHO05D008418 5.0e-113 411.8 321 64.8
Sabra02G0155300 Salix brachista HOM05D006737 ORTHO05D008418 6.1e-111 404.8 358 59.2
TWI14G0449 Tripterygium wilfordii HOM05D006737 ORTHO05D008418 1.4e-110 403.7 311 65.3
FAN20G1602 Fragaria x ananassa HOM05D006737 ORTHO05D008418 7.4e-109 397.9 308 65.6
QL12p028401 Quercus lobata HOM05D006737 ORTHO05D008418 9.7e-109 397.5 314 62.4
Cpa.g.sc9.256 Carica papaya HOM05D006737 ORTHO05D008418 1.3e-108 397.1 308 64.0
Thecc.01G301300 Theobroma cacao HOM05D006737 ORTHO05D008418 4.8e-108 395.2 350 59.1
Gorai.008G144900 Gossypium raimondii HOM05D006737 ORTHO05D008418 6.3e-108 394.8 318 62.6
CiPaw.07G109600 Carya illinoinensis HOM05D006737 ORTHO05D008418 6.9e-107 391.3 255 72.5
Gohir.A12G130100 Gossypium hirsutum HOM05D006737 ORTHO05D008418 2.0e-106 389.8 321 62.0
Gohir.D12G133900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 2.0e-106 389.8 318 61.9
Actinidia01489 Actinidia chinensis HOM05D006737 ORTHO05D008418 3.4e-106 389.0 237 78.5
Hma1.2p1_0491F.1_g164620 Hydrangea macrophylla HOM05D006737 ORTHO05D008418 7.2e-104 381.3 298 64.1
MBI19_g26092_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 5.1e-102 375.2 309 59.9
Gohir.D08G085900 Gossypium hirsutum HOM05D006737 ORTHO05D008418 2.6e-101 372.9 306 60.5
Gorai.004G090400 Gossypium raimondii HOM05D006737 ORTHO05D008418 4.4e-101 372.1 306 60.5
MSTRG.12607 Avicennia marina HOM05D006737 ORTHO05D008418 7.4e-101 371.3 318 59.4
Gohir.A08G076400 Gossypium hirsutum HOM05D006737 ORTHO05D008418 7.4e-101 371.3 296 61.5
PSO407G0435 Papaver somniferum HOM05D006737 ORTHO05D008418 1.3e-100 370.5 307 60.3
Aqoxy2G02933 Aquilegia oxysepala HOM05D006737 ORTHO05D008418 3.1e-99 365.9 311 60.8
Eucgr.H01107 Eucalyptus grandis HOM05D006737 ORTHO05D008418 7.0e-99 364.8 291 62.2
Sopen06g035940 Solanum pennellii HOM05D006737 ORTHO05D008418 9.1e-99 364.4 286 63.6
Glyma.19G211400 Glycine max HOM05D006737 ORTHO05D008418 1.2e-98 364.0 289 63.7
Solyc06g084570.4 Solanum lycopersicum HOM05D006737 ORTHO05D008418 1.2e-98 364.0 290 63.1
CANSAT25G2451 Cannabis sativa HOM05D006737 ORTHO05D008418 1.6e-98 363.6 308 60.7
Lsat_1_v5_gn_8_164261 Lactuca sativa HOM05D006737 ORTHO05D008418 2.0e-98 363.2 321 57.3
Lj6g0001904 Lotus japonicus HOM05D006737 ORTHO05D008418 2.6e-98 362.8 288 62.2
ECA236G1530 Erigeron canadensis HOM05D006737 ORTHO05D008418 3.5e-98 362.5 332 56.0
PSO170G1161 Papaver somniferum HOM05D006737 ORTHO05D008418 4.5e-98 362.1 307 59.3
Nitab4.5_0004367g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 3.8e-97 359.0 352 54.8
CAN.G1209.24 Capsicum annuum HOM05D006737 ORTHO05D008418 3.2e-96 355.9 288 62.8
PGR119G0152 Punica granatum HOM05D006737 ORTHO05D008418 7.2e-96 354.8 312 55.8
Oeu048335.1 Olea europaea HOM05D006737 ORTHO05D008418 8.0e-95 351.3 235 70.2
SalBow2G2271 Salvia bowleyana HOM05D006737 ORTHO05D008418 1.0e-94 350.9 257 62.6
Hund05430 Selenicereus undatus HOM05D006737 ORTHO05D008418 4.0e-94 349.0 289 59.2
Phvul.001G207600 Phaseolus vulgaris HOM05D006737 ORTHO05D008418 2.0e-93 346.7 322 56.8
EL10Ac7g17513 Beta vulgaris HOM05D006737 ORTHO05D008418 4.4e-93 345.5 298 56.7
AUR62008669 Chenopodium quinoa HOM05D006737 ORTHO05D008418 5.7e-93 345.1 283 59.7
arahy.Tifrunner.gnm1.ann1.AY1VU4 Arachis hypogaea HOM05D006737 ORTHO05D008418 7.5e-93 344.7 290 59.3
Cc01_g20900 Coffea canephora HOM05D006737 ORTHO05D008418 9.7e-93 344.4 323 56.0
MBI19_g25361_MAGBIO Magnolia biondii HOM05D006737 ORTHO05D008418 1.3e-92 344.0 353 52.1
CsaV3_6G041030 Cucumis sativus L. HOM05D006737 ORTHO05D008418 2.2e-92 343.2 315 56.2
VMungo1383G2597 Vigna mungo HOM05D006737 ORTHO05D008418 8.2e-92 341.3 256 64.1
MELO3C024580.2 Cucumis melo HOM05D006737 ORTHO05D008418 2.4e-91 339.7 315 55.9
Peaxi162Scf00140g01213 Petunia axillaris HOM05D006737 ORTHO05D008418 2.4e-91 339.7 263 64.3
DCAR_002840 Daucus carota HOM05D006737 ORTHO05D008418 5.3e-91 338.6 283 58.0
BolC3t16077H Brassica oleracea HOM05D006737 ORTHO05D008418 7.0e-91 338.2 299 56.9
ClCG01G014930 Citrullus lanatus HOM05D006737 ORTHO05D008418 7.0e-91 338.2 312 56.1
AUR62025575 Chenopodium quinoa HOM05D006737 ORTHO05D008418 4.5e-90 335.5 298 57.0
Thhalv10028823m.g Eutrema salsugineum HOM05D006737 ORTHO05D008418 1.7e-89 333.6 293 56.7
BcaC01g06761 Brassica carinata HOM05D006737 ORTHO05D008418 2.9e-89 332.8 294 57.8
C03p37890 Brassica napus HOM05D006737 ORTHO05D008418 3.8e-89 332.4 300 57.0
AL6G50710 Arabidopsis lyrata HOM05D006737 ORTHO05D008418 1.5e-88 330.5 316 53.8
Duzib138G1512 Durio zibethinus HOM05D006737 ORTHO05D008418 1.9e-88 330.1 241 67.6
Carub.0006s3475 Capsella rubella HOM05D006737 ORTHO05D008418 4.2e-88 328.9 315 54.3
SGA_v2.0_scaffold198G41142 Striga asiatica HOM05D006737 ORTHO05D008418 4.2e-88 328.9 316 53.8
HanXRQChr04g0114161 Helianthus annuus HOM05D006737 ORTHO05D008418 9.4e-88 327.8 271 57.2
Aa31LG5G2050 Aethionema arabicum HOM05D006737 ORTHO05D008418 2.1e-87 326.6 286 56.3
BcaB01g02446 Brassica carinata HOM05D006737 ORTHO05D008418 2.1e-87 326.6 292 55.5
A03p31080 Brassica napus HOM05D006737 ORTHO05D008418 6.1e-87 325.1 298 57.0
BraA03t12285Z Brassica rapa HOM05D006737 ORTHO05D008418 6.1e-87 325.1 298 57.0
Lalb_Chr02g0146391 Lupinus albus HOM05D006737 ORTHO05D008418 8.0e-87 324.7 285 57.9
Migut.O00484 Erythranthe guttata HOM05D006737 ORTHO05D008418 1.0e-86 324.3 309 55.3
Sp6g02290 Schrenkiella parvula HOM05D006737 ORTHO05D008418 1.0e-86 324.3 319 53.9
CARHR250600 Cardamine hirsuta HOM05D006737 ORTHO05D008418 8.8e-86 321.2 315 52.4
Migut.N01508 Erythranthe guttata HOM05D006737 ORTHO05D008418 8.8e-86 321.2 309 54.7
arahy.Tifrunner.gnm1.ann1.B4PCIP Arachis hypogaea HOM05D006737 ORTHO05D008418 2.0e-85 320.1 317 54.3
Sc05g0003760 Simmondsia chinensis HOM05D006737 ORTHO05D008418 1.3e-84 317.4 324 54.3
CDE01G0235 Ceratophyllum demersum HOM05D006737 ORTHO05D008418 5.4e-83 312.0 306 50.3
COL.COLO4_23338 Corchorus olitorius HOM05D006737 ORTHO05D008418 9.1e-83 311.2 209 70.8
Migut.J01135 Erythranthe guttata HOM05D006737 ORTHO05D008418 1.3e-81 307.4 307 54.4
AT4G02405 Arabidopsis thaliana HOM05D006737 ORTHO05D008418 1.2e-74 284.3 284 50.4
Lj2A1195G25 Lonicera japonica HOM05D006737 ORTHO05D008418 1.3e-73 280.8 268 55.6
Os07g0247100 Oryza sativa ssp. japonica HOM05D006737 ORTHO05D008418 1.1e-64 251.1 345 43.2
Zm00001eb097030 Zea mays HOM05D006737 ORTHO05D008418 7.3e-64 248.4 296 46.6
Sed0017513 Sechium edule HOM05D006737 ORTHO05D008418 1.2e-63 247.7 227 55.1
Dinv33057 Davidia involucrata HOM05D006737 ORTHO05D008418 2.4e-51 206.8 172 64.0
Nitab4.5_0002820g0110 Nicotiana tabacum HOM05D006737 ORTHO05D008418 6.8e-46 188.7 140 67.9
Oeu010666.1 Olea europaea HOM05D006737 ORTHO05D008418 1.5e-45 187.6 135 63.0
Pp3c24_12380 Physcomitrium patens HOM05D006737 ORTHO05D008418 1.9e-43 180.6 326 36.5
PGSC0003DMG400024036 Solanum tuberosum HOM05D006737 ORTHO05D008418 2.1e-34 150.6 126 57.9
arahy.Tifrunner.gnm1.ann1.MB1A81 Arachis hypogaea HOM05D006737 ORTHO05D008418 3.5e-34 149.8 124 58.9
VMungo1383G3174 Vigna mungo HOM05D006737 ORTHO05D008418 3.5e-34 149.8 256 38.3
Mapoly0132s0018 Marchantia polymorpha HOM05D006737 ORTHO05D008418 1.5e-32 144.4 237 37.1
Dinv31287 Davidia involucrata HOM05D006737 ORTHO05D008418 1.4e-27 127.9 85 68.2
arahy.Tifrunner.gnm1.ann1.MU6BTE Arachis hypogaea HOM05D006737 ORTHO05D008418 3.2e-27 126.7 116 52.6
Dinv07247 Davidia involucrata HOM05D006737 ORTHO05D008418 4.2e-27 126.3 85 67.1
Dinv17961 Davidia involucrata HOM05D006737 ORTHO05D008418 2.3e-25 120.6 115 53.0
SEGI_39136 Sequoiadendron giganteum HOM05D006737 ORTHO05D008418 3.4e-21 106.7 141 40.4
Dinv02523 Davidia involucrata HOM05D006737 ORTHO05D008418 3.7e-15 86.7 72 54.2
BcaB01g02050 Brassica carinata HOM05D006737 ORTHO05D008418 4.8e-15 86.3 102 45.1
BcaB01g02447 Brassica carinata HOM05D006737 ORTHO05D008418 7.6e-13 79.0 63 60.3
Dinv32677 Davidia involucrata HOM05D006737 ORTHO05D008418 1.4e-11 74.7 55 58.2
MCO02G241 Micromonas commoda HOM05D006737 ORTHO05D008418 7.1e-11 72.4 216 29.2
Cre09.g387282 Chlamydomonas reinhardtii HOM05D006737 ORTHO05D008418 5.7e-08 62.8 328 24.7
Atru.chr9.1259 Acer truncatum HOM05D000593 ORTHO05D002268 9.6e-08 62.0 38 78.9
Atru.chr3.1390 Acer truncatum HOM05D000593 ORTHO05D000562 2.1e-07 60.8 38 76.3


User provided reference genes

Program Settings