Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02288 Vaccinium macrocarpon HOM05D000267 ORTHO05D009944 1.6e-59 232.6 124 100.0
Rhsim11G0193400 Rhododendron simsii HOM05D000267 ORTHO05D009944 1.2e-30 136.7 93 81.7
Actinidia18043 Actinidia chinensis HOM05D000267 ORTHO05D002764 2.4e-23 112.5 92 67.4
CSS0022193 Camellia sinensis var. sinensis HOM05D000267 ORTHO05D009944 1.2e-22 110.2 97 64.9
Dinv41920 Davidia involucrata HOM05D000267 ORTHO05D002764 2.5e-20 102.4 89 60.7
Oeu015554.3 Olea europaea HOM05D000267 ORTHO05D002764 1.5e-17 93.2 92 54.3
Peaxi162Scf00078g01332 Petunia axillaris HOM05D000267 ORTHO05D009944 8.3e-16 87.4 97 52.6
AUR62013005 Chenopodium quinoa HOM05D000267 ORTHO05D009944 2.4e-15 85.9 110 50.9
Nitab4.5_0007484g0010 Nicotiana tabacum HOM05D000267 ORTHO05D009944 3.1e-15 85.5 76 59.2
GSVIVG01023990001 Vitis vinifera HOM05D000267 ORTHO05D009944 5.4e-15 84.7 95 53.7
Migut.B00061 Erythranthe guttata HOM05D000267 ORTHO05D009944 1.6e-14 83.2 86 59.3
EL10Ac9g21344 Beta vulgaris HOM05D000267 ORTHO05D009944 4.5e-14 81.6 79 55.7
Cc09_g10270 Coffea canephora HOM05D000267 ORTHO05D009944 7.7e-14 80.9 75 68.0
CiPaw.05G084800 Carya illinoinensis HOM05D000267 ORTHO05D009944 1.7e-13 79.7 97 51.5
Nitab4.5_0000079g0250 Nicotiana tabacum HOM05D000267 ORTHO05D000298 2.9e-13 79.0 48 72.9
AUR62010015 Chenopodium quinoa HOM05D000267 ORTHO05D009944 8.5e-13 77.4 57 70.2
AUR62015150 Chenopodium quinoa HOM05D000267 ORTHO05D009944 8.5e-13 77.4 57 70.2
Ciclev10028457m.g Citrus clementina HOM05D000267 ORTHO05D009944 1.2e-11 73.6 106 44.3
Atru.chr5.3400 Acer truncatum HOM05D000267 ORTHO05D009944 2.1e-11 72.8 96 56.2
Prupe.8G168300 Prunus persica HOM05D000267 ORTHO05D009944 2.1e-11 72.8 100 45.0
Cfa005283 Carpinus fangiana HOM05D000267 ORTHO05D002764 1.0e-10 70.5 98 53.1
TWI79G0018 Tripterygium wilfordii HOM05D000267 ORTHO05D009944 3.0e-10 68.9 124 44.4
Hma1.2p1_0163F.1_g072670 Hydrangea macrophylla HOM05D000267 ORTHO05D009944 4.0e-10 68.6 51 66.7
MD05G1124600 Malus domestica HOM05D000267 ORTHO05D009944 4.0e-10 68.6 74 50.0
Haze_02110 Corylus avellana HOM05D000267 ORTHO05D009944 5.2e-10 68.2 98 52.0
TAR628G1652 Trochodendron aralioides HOM05D000267 ORTHO05D009944 5.2e-10 68.2 89 46.1
Thecc.02G056000 Theobroma cacao HOM05D000267 ORTHO05D009944 8.8e-10 67.4 104 42.3
Gorai.008G037400 Gossypium raimondii HOM05D000267 ORTHO05D009944 1.2e-09 67.0 54 66.7
Nn5g30837 Nelumbo nucifera HOM05D000267 ORTHO05D009944 1.2e-09 67.0 96 44.8
Potri.004G177400 Populus trichocarpa HOM05D000267 ORTHO05D009944 1.2e-09 67.0 51 66.7
THA.LOC104807804 Tarenaya hassleriana HOM05D000267 ORTHO05D009944 1.2e-09 67.0 84 50.0
COL.COLO4_17372 Corchorus olitorius HOM05D000267 ORTHO05D009944 1.5e-09 66.6 99 52.5
Duzib132G0985 Durio zibethinus HOM05D000267 ORTHO05D009944 1.5e-09 66.6 105 51.4
FAN20G0365 Fragaria x ananassa HOM05D000267 ORTHO05D009944 2.6e-09 65.9 93 44.1
Gohir.D12G036200 Gossypium hirsutum HOM05D000267 ORTHO05D009944 2.6e-09 65.9 54 64.8
Cpa.g.sc20.108 Carica papaya HOM05D000267 ORTHO05D009944 3.4e-09 65.5 109 42.2
ClCG02G012080 Citrullus lanatus HOM05D000267 ORTHO05D009944 3.4e-09 65.5 91 42.9
Eucgr.I01454 Eucalyptus grandis HOM05D000267 ORTHO05D009944 3.4e-09 65.5 48 66.7
QL11p051524 Quercus lobata HOM05D000267 ORTHO05D009944 5.7e-09 64.7 48 64.6
Sed0004064 Sechium edule HOM05D000267 ORTHO05D009944 7.5e-09 64.3 70 48.6
Actinidia20524 Actinidia chinensis HOM05D000267 ORTHO05D002764 9.8e-09 63.9 92 45.7
Manes.11G097600 Manihot esculenta HOM05D000267 ORTHO05D009944 9.8e-09 63.9 59 61.0
Sc14g0002320 Simmondsia chinensis HOM05D000267 ORTHO05D009944 9.8e-09 63.9 54 64.8
CANSAT25G1222 Cannabis sativa HOM05D000267 ORTHO05D009944 2.2e-08 62.8 72 50.0
Pp3c3_37260 Physcomitrium patens HOM05D000267 ORTHO05D009944 2.8e-08 62.4 76 48.7
RcHm_v2.0_Chr6g0278781 Rosa chinensis HOM05D000267 ORTHO05D009944 2.8e-08 62.4 57 56.1
AagrBONN_evm.TU.Sc2ySwM_344.2069 Anthoceros agrestis HOM05D000267 ORTHO05D009944 4.9e-08 61.6 63 50.8
Mapoly0001s0154 Marchantia polymorpha HOM05D000267 ORTHO05D009944 4.9e-08 61.6 99 38.4
FAN24G1303 Fragaria x ananassa HOM05D000267 ORTHO05D009944 1.1e-07 60.5 94 43.6
FAN27G0796 Fragaria x ananassa HOM05D000267 ORTHO05D009944 1.1e-07 60.5 64 54.7
FAN15G3022 Fragaria x ananassa HOM05D000267 ORTHO05D009944 1.4e-07 60.1 28 92.9
HPP92_001748 Vanilla planifolia HOM05D000267 ORTHO05D009944 4.1e-07 58.5 30 76.7
FvH4_2g15600 Fragaria vesca HOM05D000267 ORTHO05D009944 5.4e-07 58.2 94 42.6
SMO367G0708 Selaginella moellendorffii HOM05D000267 ORTHO05D009944 5.4e-07 58.2 34 73.5
CsaV3_2G016240 Cucumis sativus L. HOM05D000267 ORTHO05D009944 7.0e-07 57.8 91 38.5
ATR0661G537 Amborella trichopoda HOM05D000267 ORTHO05D009944 2.0e-06 56.2 60 50.0
MELO3C020832.2 Cucumis melo HOM05D000267 ORTHO05D009944 2.0e-06 56.2 89 38.2


User provided reference genes

Program Settings