Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02255 Vaccinium macrocarpon HOM05D006293 ORTHO05D007971 7.6e-170 600.5 323 100.0
Rhsim11G0188600 Rhododendron simsii HOM05D006293 ORTHO05D007971 2.3e-150 535.8 335 87.8
Rhsim11G0188500 Rhododendron simsii HOM05D006293 ORTHO05D007971 4.2e-144 515.0 378 73.3
Dinv04963 Davidia involucrata HOM05D006293 ORTHO05D007971 6.1e-127 458.0 327 75.5
QL11p047722 Quercus lobata HOM05D006293 ORTHO05D007971 1.9e-120 436.4 329 74.8
GSVIVG01024071001 Vitis vinifera HOM05D006293 ORTHO05D007971 3.1e-115 419.1 326 69.6
CSS0030950 Camellia sinensis var. sinensis HOM05D006293 ORTHO05D007971 6.9e-115 417.9 330 72.1
Cfa005191 Carpinus fangiana HOM05D006293 ORTHO05D007971 3.4e-114 415.6 330 68.2
Haze_02189 Corylus avellana HOM05D006293 ORTHO05D007971 5.0e-113 411.8 330 69.4
TAR376G0811 Trochodendron aralioides HOM05D006293 ORTHO05D007971 8.5e-113 411.0 326 62.6
Peaxi162Scf00362g00956 Petunia axillaris HOM05D001375 ORTHO05D001222 4.2e-112 408.7 328 64.9
Potri.004G169200 Populus trichocarpa HOM05D006293 ORTHO05D007971 7.2e-112 407.9 326 70.6
Cc02_g16450 Coffea canephora HOM05D006293 ORTHO05D007971 1.6e-111 406.8 324 66.4
Nn5g29105 Nelumbo nucifera HOM05D006293 ORTHO05D007971 2.7e-111 406.0 327 61.2
Oeu060421.1 Olea europaea HOM05D006293 ORTHO05D007971 4.7e-111 405.2 325 70.2
FAN15G0431 Fragaria x ananassa HOM05D006293 ORTHO05D007971 7.4e-109 397.9 323 69.3
Glyma.04G005100 Glycine max HOM05D006293 ORTHO05D007971 2.2e-108 396.4 333 68.8
Oeu014457.2 Olea europaea HOM05D006293 ORTHO05D007971 1.2e-106 390.6 332 64.2
FAN27G2989 Fragaria x ananassa HOM05D006293 ORTHO05D007971 1.6e-106 390.2 348 63.5
FAN24G1019 Fragaria x ananassa HOM05D006293 ORTHO05D007971 2.0e-106 389.8 347 64.8
FvH4_2g01740 Fragaria vesca HOM05D006293 ORTHO05D007971 2.6e-106 389.4 355 62.0
Glyma.06G004900 Glycine max HOM05D006293 ORTHO05D007971 2.6e-106 389.4 327 64.2
VMungo1309G1166 Vigna mungo HOM05D006293 ORTHO05D007971 3.5e-106 389.0 326 64.7
FAN20G1949 Fragaria x ananassa HOM05D006293 ORTHO05D007971 3.8e-105 385.6 345 63.2
Gorai.002G193700 Gossypium raimondii HOM05D006293 ORTHO05D007971 3.8e-105 385.6 326 61.3
Prupe.8G161400 Prunus persica HOM05D006293 ORTHO05D007971 3.8e-105 385.6 331 64.0
PGSC0003DMG400001627 Solanum tuberosum HOM05D006293 ORTHO05D007971 3.8e-105 385.6 329 60.8
Manes.11G090800 Manihot esculenta HOM05D006293 ORTHO05D007971 6.5e-105 384.8 321 67.0
Gohir.D01G156200 Gossypium hirsutum HOM05D006293 ORTHO05D007971 1.1e-104 384.0 326 61.0
CAN.G588.32 Capsicum annuum HOM05D006293 ORTHO05D007971 2.5e-104 382.9 332 63.0
Gohir.A01G164300 Gossypium hirsutum HOM05D006293 ORTHO05D007971 3.2e-104 382.5 328 61.3
RcHm_v2.0_Chr6g0244771 Rosa chinensis HOM05D006293 ORTHO05D007971 4.2e-104 382.1 335 64.2
Solyc01g111210.3 Solanum lycopersicum HOM05D001375 ORTHO05D001222 5.5e-104 381.7 328 54.3
MD05G1116900 Malus domestica HOM05D006293 ORTHO05D007971 7.2e-104 381.3 343 62.4
Thecc.02G066200 Theobroma cacao HOM05D006293 ORTHO05D007971 4.7e-103 378.6 327 66.4
Sopen01g053260 Solanum pennellii HOM05D006293 ORTHO05D007971 6.1e-103 378.3 329 53.8
SGA_v2.0_scaffold32G13265 Striga asiatica HOM05D006293 ORTHO05D007971 6.1e-103 378.3 321 61.4
MSTRG.16884 Avicennia marina HOM05D006293 ORTHO05D007971 1.4e-102 377.1 346 65.0
Lj1g0023631 Lotus japonicus HOM05D006293 ORTHO05D007971 2.3e-102 376.3 323 65.6
CiPaw.05G077900 Carya illinoinensis HOM05D006293 ORTHO05D007971 3.0e-102 375.9 303 66.3
CANSAT25G1913 Cannabis sativa HOM05D006293 ORTHO05D007971 5.2e-102 375.2 345 63.8
TAR628G0693 Trochodendron aralioides HOM05D006293 ORTHO05D007971 8.8e-102 374.4 327 57.5
COL.COLO4_17266 Corchorus olitorius HOM05D006293 ORTHO05D007971 1.2e-101 374.0 337 62.3
Nitab4.5_0000980g0060 Nicotiana tabacum HOM05D001375 ORTHO05D001222 1.2e-101 374.0 324 63.3
Phvul.009G025500 Phaseolus vulgaris HOM05D006293 ORTHO05D007971 1.5e-101 373.6 326 64.4
Eucgr.G01761 Eucalyptus grandis HOM05D006293 ORTHO05D007971 3.3e-101 372.5 327 64.2
Ca_15314_v3 Cicer arietinum L. HOM05D006293 ORTHO05D007971 1.7e-100 370.2 331 58.9
Ciclev10028711m.g Citrus clementina HOM05D006293 ORTHO05D007971 2.8e-100 369.4 361 61.8
Medtr3g117760 Medicago truncatula HOM05D006293 ORTHO05D007971 4.8e-100 368.6 329 56.5
Nn1g05912 Nelumbo nucifera HOM05D006293 ORTHO05D007971 1.8e-99 366.7 314 62.1
ClCG02G011620 Citrullus lanatus HOM05D006293 ORTHO05D007971 2.4e-99 366.3 324 60.5
Cpa.g.sc37.182 Carica papaya HOM05D006293 ORTHO05D007971 3.1e-99 365.9 320 66.9
Lj5C183T16 Lonicera japonica HOM05D006293 ORTHO05D007971 4.1e-99 365.5 333 63.4
Duzib132G0283 Durio zibethinus HOM05D006293 ORTHO05D007971 5.3e-99 365.2 320 65.9
TAR536G0014 Trochodendron aralioides HOM05D006293 ORTHO05D007971 2.0e-98 363.2 326 55.5
HanXRQChr17g0557851 Helianthus annuus HOM05D006293 ORTHO05D007971 8.5e-97 357.8 316 63.3
TWI31G0553 Tripterygium wilfordii HOM05D006293 ORTHO05D007971 7.2e-96 354.8 320 63.1
TPR.G38570 Trifolium pratense HOM05D006293 ORTHO05D007971 1.2e-95 354.0 335 56.4
Psat5g003040 Pisum sativum HOM05D006293 ORTHO05D007971 4.7e-95 352.1 336 63.7
Dinv41970 Davidia involucrata HOM05D006293 ORTHO05D007971 6.1e-95 351.7 277 63.5
Migut.B00115 Erythranthe guttata HOM05D006293 ORTHO05D007971 6.1e-95 351.7 322 61.2
Lalb_Chr23g0265081 Lupinus albus HOM05D006293 ORTHO05D007971 6.1e-95 351.7 324 64.2
Lsat_1_v5_gn_8_126000 Lactuca sativa HOM05D006293 ORTHO05D007971 1.0e-94 350.9 317 57.7
DCAR_003705 Daucus carota HOM05D006293 ORTHO05D007971 1.4e-94 350.5 325 60.6
Sed0004865 Sechium edule HOM05D006293 ORTHO05D007971 4.1e-91 339.0 335 56.1
Sc14g0002130 Simmondsia chinensis HOM05D006293 ORTHO05D007971 1.0e-89 334.3 330 55.8
MELO3C020791.2 Cucumis melo HOM05D006293 ORTHO05D007971 2.5e-88 329.7 327 59.9
THA.LOC104804336 Tarenaya hassleriana HOM05D006293 ORTHO05D007971 2.5e-88 329.7 323 55.1
Hund06410 Selenicereus undatus HOM05D006293 ORTHO05D007971 8.0e-87 324.7 321 58.6
PSO170G2363 Papaver somniferum HOM05D006293 ORTHO05D007971 5.7e-85 318.5 345 58.8
ATR0810G191 Amborella trichopoda HOM05D006293 ORTHO05D007971 7.5e-85 318.2 313 51.4
EL10Ac9g21428 Beta vulgaris HOM05D006293 ORTHO05D007971 7.5e-85 318.2 357 50.7
AUR62010081 Chenopodium quinoa HOM05D006293 ORTHO05D007971 2.8e-84 316.2 328 54.0
Ah.01g022670 Amaranthus hybridus HOM05D006293 ORTHO05D007971 1.8e-83 313.5 322 54.7
AUR62013075 Chenopodium quinoa HOM05D006293 ORTHO05D007971 2.4e-83 313.2 328 53.7
ECA233G0605 Erigeron canadensis HOM05D001375 ORTHO05D001222 3.1e-83 312.8 321 52.3
PSO700G0292 Papaver somniferum HOM05D006293 ORTHO05D007971 1.5e-80 303.9 318 51.3
BcaC04g23011 Brassica carinata HOM05D006293 ORTHO05D007971 2.5e-80 303.1 337 56.1
BolC9t54199H Brassica oleracea HOM05D006293 ORTHO05D007971 2.5e-80 303.1 337 56.1
C09p13060 Brassica napus HOM05D006293 ORTHO05D007971 9.5e-80 301.2 337 55.8
A09p11050 Brassica napus HOM05D006293 ORTHO05D007971 1.4e-78 297.4 345 53.0
CARHR106850 Cardamine hirsuta HOM05D006293 ORTHO05D007971 3.0e-78 296.2 333 51.4
BraA07t28238Z Brassica rapa HOM05D006293 ORTHO05D007971 8.9e-78 294.7 348 51.1
BraA09t36749Z Brassica rapa HOM05D006293 ORTHO05D007971 2.0e-77 293.5 345 52.2
BcaC06g36161 Brassica carinata HOM05D006293 ORTHO05D007971 5.7e-77 292.0 348 50.6
C07p07090 Brassica napus HOM05D006293 ORTHO05D007971 5.7e-77 292.0 348 50.6
BolC7t41128H Brassica oleracea HOM05D006293 ORTHO05D007971 5.7e-77 292.0 348 50.6
A07p04460 Brassica napus HOM05D006293 ORTHO05D007971 1.3e-76 290.8 348 50.6
Carub.0003s3038 Capsella rubella HOM05D006293 ORTHO05D007971 1.7e-76 290.4 341 53.4
BcaB07g31757 Brassica carinata HOM05D006293 ORTHO05D007971 3.7e-76 289.3 345 54.2
MBI05_g07501_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 4.9e-76 288.9 318 46.2
MBI05_g30117_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 6.4e-76 288.5 318 46.2
CsaV3_2G015780 Cucumis sativus L. HOM05D006293 ORTHO05D007971 1.1e-75 287.7 329 57.1
AL3G49260 Arabidopsis lyrata HOM05D006293 ORTHO05D007971 1.4e-75 287.3 324 53.7
MBI05_g47219_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 1.4e-75 287.3 318 46.5
HanXRQChr10g0298941 Helianthus annuus HOM05D006293 ORTHO05D007971 1.2e-74 284.3 331 49.2
Sp3g30120 Schrenkiella parvula HOM05D006293 ORTHO05D007971 2.7e-74 283.1 377 49.9
Aqoxy5G00988 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 3.5e-74 282.7 311 52.4
Thhalv10022734m.g Eutrema salsugineum HOM05D006293 ORTHO05D007971 4.6e-74 282.3 380 49.5
AT2G16630 Arabidopsis thaliana HOM05D006293 ORTHO05D007971 5.0e-73 278.9 359 47.6
Aa31LG8G13900 Aethionema arabicum HOM05D006293 ORTHO05D007971 3.6e-71 272.7 324 54.3
MBI05_g48109_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 5.2e-70 268.9 318 44.0
Ah.01g009070 Amaranthus hybridus HOM05D006293 ORTHO05D007971 5.8e-69 265.4 322 49.1
HPP92_013009 Vanilla planifolia HOM05D006293 ORTHO05D007971 3.0e-65 253.1 305 43.6
CDE05G1002 Ceratophyllum demersum HOM05D006293 ORTHO05D007971 5.6e-64 248.8 328 41.5
unitig_0.g43 Utricularia gibba HOM05D006293 ORTHO05D007971 1.6e-63 247.3 312 44.6
Aqoxy1G01171 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 2.1e-63 246.9 261 59.0
unitig_0.g827 Utricularia gibba HOM05D006293 ORTHO05D007971 1.9e-59 233.8 319 46.7
MSTRG.20014 Avicennia marina HOM05D006293 ORTHO05D007971 3.0e-57 226.5 163 66.3
Nitab4.5_0000283g0050 Nicotiana tabacum HOM05D001375 ORTHO05D001222 8.1e-55 218.4 325 39.1
SEGI_19356 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 1.2e-53 214.5 335 43.6
PGR042G0330 Punica granatum HOM05D006293 ORTHO05D007971 3.4e-53 213.0 391 43.0
BcaB03g16385 Brassica carinata HOM05D006293 ORTHO05D007971 1.3e-49 201.1 352 44.3
MD10G1120000 Malus domestica HOM05D006293 ORTHO05D007971 5.1e-49 199.1 130 71.5
MD10G1120100 Malus domestica HOM05D006293 ORTHO05D007971 1.5e-48 197.6 127 67.7
SEGI_14996 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 6.2e-47 192.2 318 42.8
MBI05_g21530_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 1.5e-45 187.6 233 42.9
Gohir.1Z049391 Gossypium hirsutum HOM05D006293 ORTHO05D007971 1.8e-38 164.1 161 55.3
ECA234G1535 Erigeron canadensis HOM05D001991 ORTHO05D007971 1.2e-37 161.4 147 49.7
Mapoly0014s0128 Marchantia polymorpha HOM05D006293 ORTHO05D007971 3.0e-33 146.7 325 36.6
Pp3c1_27500 Physcomitrium patens HOM05D006293 ORTHO05D007971 6.2e-31 139.0 300 31.3
Pp3c14_8250 Physcomitrium patens HOM05D006293 ORTHO05D007971 8.1e-31 138.7 305 31.1
Zm00001eb210030 Zea mays HOM05D006293 ORTHO05D007971 1.2e-26 124.8 142 44.4
Actinidia00600 Actinidia chinensis HOM05D006293 ORTHO05D007971 2.3e-25 120.6 160 44.4
SMO223G0025 Selaginella moellendorffii HOM05D006293 ORTHO05D007971 3.3e-24 116.7 324 27.8
Aqoxy6G00177 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 1.6e-23 114.4 114 48.2
MBI05_g31848_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 1.1e-22 111.7 101 49.5
SEGI_23181 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 3.2e-19 100.1 209 45.5
SGA_v2.0_scaffold9G04828 Striga asiatica HOM05D006293 ORTHO05D007971 9.4e-11 72.0 54 61.1
SMO367G0707 Selaginella moellendorffii HOM05D007363 ORTHO05D009018 6.3e-07 59.3 88 39.8
Mapoly0022s0141 Marchantia polymorpha HOM05D021038 ORTHO05D009018 3.1e-06 57.0 109 39.4
AagrBONN_evm.TU.Sc2ySwM_368.1639 Anthoceros agrestis HOM05D006293 ORTHO05D009176 5.3e-06 56.2 151 31.1
CANSAT01G1440 Cannabis sativa HOM05D007363 ORTHO05D009018 6.9e-06 55.8 93 40.9


User provided reference genes

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