Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02226 Vaccinium macrocarpon HOM05D007013 ORTHO05D008999 1.8e-248 862.1 427 100.0
Actinidia05088 Actinidia chinensis HOM05D007013 ORTHO05D008999 1.4e-184 649.8 395 81.8
CSS0027260 Camellia sinensis var. sinensis HOM05D007013 ORTHO05D008999 1.5e-178 629.8 396 79.8
Hma1.2p1_0036F.1_g023520 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 4.7e-159 565.1 397 71.0
GSVIVG01037670001 Vitis vinifera HOM05D007013 ORTHO05D008999 5.2e-150 535.0 396 66.4
Cc05_g13940 Coffea canephora HOM05D007013 ORTHO05D008999 1.2e-146 523.9 394 64.5
TAR624G0955 Trochodendron aralioides HOM05D007013 ORTHO05D008999 4.2e-144 515.4 395 65.8
Oeu034036.2 Olea europaea HOM05D007013 ORTHO05D008999 3.0e-142 509.2 393 63.1
Atru.chr2.3453 Acer truncatum HOM05D007013 ORTHO05D008999 1.5e-141 506.9 391 63.4
CAN.G337.80 Capsicum annuum HOM05D007013 ORTHO05D008999 1.7e-140 503.4 395 63.3
PSO675G8214 Papaver somniferum HOM05D007013 ORTHO05D008999 1.2e-138 497.3 396 62.1
PSO541G1885 Papaver somniferum HOM05D007013 ORTHO05D008999 5.9e-138 495.0 394 62.2
Solyc07g064710.3 Solanum lycopersicum HOM05D007013 ORTHO05D008999 1.0e-137 494.2 399 62.7
Nitab4.5_0005590g0010 Nicotiana tabacum HOM05D007013 ORTHO05D008999 3.2e-136 489.2 397 63.5
Peaxi162Scf00235g00319 Petunia axillaris HOM05D007013 ORTHO05D008999 3.2e-136 489.2 412 60.9
Cfa020325 Carpinus fangiana HOM05D007013 ORTHO05D008999 4.2e-136 488.8 395 61.8
Nitab4.5_0002287g0070 Nicotiana tabacum HOM05D007013 ORTHO05D008999 5.5e-136 488.4 401 62.6
Ciclev10008561m.g Citrus clementina HOM05D007013 ORTHO05D008999 1.6e-135 486.9 395 61.5
Potri.001G418800 Populus trichocarpa HOM05D007013 ORTHO05D008999 1.5e-133 480.3 395 60.0
CANSAT11G0669 Cannabis sativa HOM05D007013 ORTHO05D008999 1.7e-132 476.9 392 61.2
Duzib213G0396 Durio zibethinus HOM05D007013 ORTHO05D008999 1.7e-132 476.9 393 61.3
FvH4_3g19730 Fragaria vesca HOM05D007013 ORTHO05D008999 2.2e-132 476.5 388 61.1
MD11G1215400 Malus domestica HOM05D007013 ORTHO05D008999 6.3e-132 474.9 392 59.7
MSTRG.14440 Avicennia marina HOM05D007013 ORTHO05D008999 1.1e-131 474.2 390 58.5
TWI38G0247 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 1.4e-131 473.8 395 58.0
RcHm_v2.0_Chr5g0033071 Rosa chinensis HOM05D007013 ORTHO05D008999 1.8e-131 473.4 391 60.6
CiPaw.12G131100 Carya illinoinensis HOM05D007013 ORTHO05D008999 9.1e-131 471.1 392 61.0
Hma1.2p1_0036F.1_g023530 Hydrangea macrophylla HOM05D007013 ORTHO05D008999 3.5e-130 469.2 322 73.3
Gohir.D01G068100 Gossypium hirsutum HOM05D007013 ORTHO05D008999 7.7e-130 468.0 393 60.3
Gorai.002G090100 Gossypium raimondii HOM05D007013 ORTHO05D008999 1.0e-129 467.6 393 60.1
Thecc.07G033700 Theobroma cacao HOM05D007013 ORTHO05D008999 1.3e-129 467.2 395 60.8
QL08p009594 Quercus lobata HOM05D007013 ORTHO05D008999 1.7e-129 466.8 395 59.5
Hund01977 Selenicereus undatus HOM05D007013 ORTHO05D008999 2.5e-128 463.0 393 57.5
Eucgr.F03478 Eucalyptus grandis HOM05D007013 ORTHO05D008999 4.2e-128 462.2 405 58.3
Aqoxy1G02096 Aquilegia oxysepala HOM05D007013 ORTHO05D008999 1.0e-126 457.6 393 59.3
Migut.H01815 Erythranthe guttata HOM05D007013 ORTHO05D008999 1.0e-126 457.6 396 58.1
EL10Ac4g07781 Beta vulgaris HOM05D007013 ORTHO05D008999 1.4e-126 457.2 395 57.0
DCAR_012723 Daucus carota HOM05D007013 ORTHO05D008999 4.0e-126 455.7 397 57.9
Sc16g0005930 Simmondsia chinensis HOM05D007013 ORTHO05D008999 4.0e-126 455.7 397 57.9
Lj6g0002864 Lotus japonicus HOM05D007013 ORTHO05D008999 1.5e-125 453.8 393 57.5
HanXRQChr03g0076401 Helianthus annuus HOM05D007013 ORTHO05D008999 2.8e-124 449.5 389 57.8
Medtr3g052590 Medicago truncatula HOM05D007013 ORTHO05D008999 3.7e-124 449.1 398 55.3
THA.LOC104825406 Tarenaya hassleriana HOM05D007013 ORTHO05D008999 2.4e-123 446.4 396 57.1
AUR62020414 Chenopodium quinoa HOM05D007013 ORTHO05D008999 5.4e-123 445.3 358 58.4
Lalb_Chr18g0049881 Lupinus albus HOM05D007013 ORTHO05D008999 3.5e-122 442.6 393 57.8
Aa31LG8G7290 Aethionema arabicum HOM05D007013 ORTHO05D008999 1.0e-121 441.0 399 57.6
Haze_09698 Corylus avellana HOM05D007013 ORTHO05D008999 2.3e-121 439.9 334 62.6
CsaV3_7G021910 Cucumis sativus L. HOM05D007013 ORTHO05D008999 2.9e-121 439.5 395 57.2
Psat5g177160 Pisum sativum HOM05D007013 ORTHO05D008999 3.8e-121 439.1 393 55.2
arahy.Tifrunner.gnm1.ann1.YL2AFE Arachis hypogaea HOM05D007013 ORTHO05D008999 6.6e-121 438.3 402 54.7
ECA240G2937 Erigeron canadensis HOM05D007013 ORTHO05D008999 6.6e-121 438.3 394 57.1
Cpa.g.sc12.289 Carica papaya HOM05D007013 ORTHO05D008999 1.1e-120 437.6 393 56.7
Sopen07g032910 Solanum pennellii HOM05D007013 ORTHO05D008999 1.9e-120 436.8 353 62.6
Glyma.08G318300 Glycine max HOM05D007013 ORTHO05D008999 2.5e-120 436.4 393 55.0
AL3G34260 Arabidopsis lyrata HOM05D007013 ORTHO05D008999 4.3e-120 435.6 399 57.4
Thhalv10020871m.g Eutrema salsugineum HOM05D007013 ORTHO05D008999 5.6e-120 435.3 396 58.3
TPR.G33766 Trifolium pratense HOM05D007013 ORTHO05D008999 1.6e-119 433.7 398 55.0
MELO3C013155.2 Cucumis melo HOM05D007013 ORTHO05D008999 2.1e-119 433.3 388 57.2
FAN16G1225 Fragaria x ananassa HOM05D007013 ORTHO05D008999 6.1e-119 431.8 393 57.5
Carub.0003s2044 Capsella rubella HOM05D007013 ORTHO05D008999 5.2e-118 428.7 396 56.6
BcaB07g30535 Brassica carinata HOM05D007013 ORTHO05D008999 8.9e-118 427.9 395 55.4
VMungo0540G0725 Vigna mungo HOM05D007013 ORTHO05D008999 1.2e-117 427.6 393 54.5
Nn1g07163 Nelumbo nucifera HOM05D007013 ORTHO05D008999 2.0e-117 426.8 364 58.5
BraA02t07867Z Brassica rapa HOM05D007013 ORTHO05D008999 2.6e-117 426.4 396 55.1
Sabra16G0284300 Salix brachista HOM05D007013 ORTHO05D008999 5.8e-117 425.2 395 56.5
Sp2g09120 Schrenkiella parvula HOM05D007013 ORTHO05D008999 2.2e-116 423.3 396 55.3
unitig_578.g16279 Utricularia gibba HOM05D001434 ORTHO05D008999 2.9e-116 422.9 385 55.6
BolC2t10525H Brassica oleracea HOM05D007013 ORTHO05D008999 4.9e-116 422.2 396 54.8
HPP92_012407 Vanilla planifolia HOM05D007013 ORTHO05D008999 4.9e-116 422.2 392 55.4
C02p44890 Brassica napus HOM05D007013 ORTHO05D008999 6.4e-116 421.8 396 55.3
Ah.06g182900 Amaranthus hybridus HOM05D007013 ORTHO05D008999 4.6e-114 415.6 393 51.9
SGA_v2.0_scaffold363G49936 Striga asiatica HOM05D007013 ORTHO05D008999 2.3e-113 413.3 420 50.0
Ca_14746_v3 Cicer arietinum L. HOM05D007013 ORTHO05D008999 3.0e-113 412.9 334 58.1
ClCG09G010880 Citrullus lanatus HOM05D007013 ORTHO05D008999 1.1e-112 411.0 395 53.9
A02p28310 Brassica napus HOM05D007013 ORTHO05D008999 1.6e-111 407.1 370 56.2
Dinv22254 Davidia involucrata HOM05D007013 ORTHO05D008999 4.0e-110 402.5 266 74.1
COL.COLO4_09677 Corchorus olitorius HOM05D007013 ORTHO05D008999 2.0e-109 400.2 393 54.2
Manes.15G070387 Manihot esculenta HOM05D007013 ORTHO05D008999 7.5e-109 398.3 317 62.5
Lsat_1_v5_gn_9_93121 Lactuca sativa HOM05D007013 ORTHO05D008999 1.3e-108 397.5 390 54.9
Rhsim06G0218600 Rhododendron simsii HOM05D007013 ORTHO05D008999 8.3e-108 394.8 268 75.0
Sed0023076 Sechium edule HOM05D007013 ORTHO05D008999 8.3e-108 394.8 347 57.9
Prupe.4G215900 Prunus persica HOM05D007013 ORTHO05D008999 9.2e-107 391.3 392 53.8
FAN11G2199 Fragaria x ananassa HOM05D007013 ORTHO05D008999 1.1e-104 384.4 388 52.8
arahy.Tifrunner.gnm1.ann1.PYQ1JD Arachis hypogaea HOM05D007013 ORTHO05D008999 1.2e-103 380.9 314 57.3
BcaC03g16648 Brassica carinata HOM05D007013 ORTHO05D008999 7.5e-101 371.7 348 55.2
Lj1A874G27 Lonicera japonica HOM05D007013 ORTHO05D008999 1.6e-98 364.0 291 62.5
ATR0794G085 Amborella trichopoda HOM05D007013 ORTHO05D008999 4.6e-98 362.5 323 58.8
AUR62015801 Chenopodium quinoa HOM05D007013 ORTHO05D008999 7.3e-96 355.1 293 56.7
PGSC0003DMG400022313 Solanum tuberosum HOM05D007013 ORTHO05D008999 1.8e-94 350.5 289 58.8
AT3G20480 Arabidopsis thaliana HOM05D007013 ORTHO05D008999 7.1e-91 338.6 317 54.9
Mapoly0002s0307 Marchantia polymorpha HOM05D007013 ORTHO05D008999 2.2e-84 317.0 392 44.4
Phvul.006G045700 Phaseolus vulgaris HOM05D007013 ORTHO05D008999 8.4e-84 315.1 300 53.3
Gohir.A01G080900 Gossypium hirsutum HOM05D007013 ORTHO05D008999 3.4e-77 293.1 312 49.7
SMO367G1261 Selaginella moellendorffii HOM05D007013 ORTHO05D008999 2.9e-76 290.0 374 42.8
CARHR096240 Cardamine hirsuta HOM05D007013 ORTHO05D008999 1.1e-62 245.0 215 54.9
SEGI_14581 Sequoiadendron giganteum HOM05D007013 ORTHO05D008999 4.3e-56 223.0 236 51.7
Zm00001eb030850 Zea mays HOM05D007013 ORTHO05D008999 5.7e-56 222.6 235 52.8
Glyma.18G095300 Glycine max HOM05D007013 ORTHO05D008999 6.1e-50 202.6 214 47.2
AagrBONN_evm.TU.Sc2ySwM_228.2947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.3e-47 194.9 282 40.1
Pp3c19_1630 Physcomitrium patens HOM05D007013 ORTHO05D008999 8.2e-47 192.2 375 33.9
Os07g0102000 Oryza sativa ssp. japonica HOM05D007013 ORTHO05D008999 3.1e-46 190.3 200 46.5
Glyma.18G095150 Glycine max HOM05D007013 ORTHO05D008999 1.9e-43 181.0 282 37.6
CBR_g39764 Chara braunii HOM05D007013 ORTHO05D008999 2.0e-40 171.0 346 33.2
CDE05G3055 Ceratophyllum demersum HOM05D007013 ORTHO05D008999 4.4e-32 143.3 236 39.0
FAN16G0901 Fragaria x ananassa HOM05D007013 ORTHO05D008999 1.9e-27 127.9 102 67.6
RcHm_v2.0_Chr4g0424981 Rosa chinensis HOM05D007013 ORTHO05D008999 4.8e-23 113.2 92 57.6
TWI34G0353 Tripterygium wilfordii HOM05D007013 ORTHO05D008999 8.3e-23 112.5 143 38.5
Rhsim06G0218700 Rhododendron simsii HOM05D007013 ORTHO05D008999 1.5e-16 91.7 96 53.1
SEGI_13858 Sequoiadendron giganteum HOM05D007013 ORTHO05D008999 3.8e-12 77.0 89 42.7
Zm00001eb030810 Zea mays HOM05D007013 ORTHO05D008999 9.5e-11 72.4 92 42.4
Medtr0152s0030 Medicago truncatula HOM05D007013 ORTHO05D008999 6.1e-10 69.7 101 35.6
Medtr0152s0050 Medicago truncatula HOM05D007013 ORTHO05D008999 3.2e-06 57.4 70 38.6


User provided reference genes

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