Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02178 Vaccinium macrocarpon HOM05D008254 ORTHO05D010423 6.3e-123 444.1 223 100.0
CSS0044006 Camellia sinensis var. sinensis HOM05D008254 ORTHO05D010423 9.4e-87 323.9 227 72.7
Actinidia00462 Actinidia chinensis HOM05D008254 ORTHO05D010423 3.6e-86 322.0 227 72.7
Rhsim11G0168800 Rhododendron simsii HOM05D000144 ORTHO05D003364 7.5e-84 314.3 224 73.2
Potri.009G105900 Populus trichocarpa HOM05D008254 ORTHO05D010423 1.6e-65 253.4 226 58.8
Duzib132G0754 Durio zibethinus HOM05D008254 ORTHO05D010423 2.3e-64 249.6 218 57.8
QL11p037484 Quercus lobata HOM05D008254 ORTHO05D010423 3.9e-64 248.8 223 58.7
GSVIVG01031792001 Vitis vinifera HOM05D008254 ORTHO05D010423 5.0e-64 248.4 224 57.6
Sabra09G0080900 Salix brachista HOM05D008254 ORTHO05D010423 1.9e-63 246.5 225 57.3
PGSC0003DMG400008243 Solanum tuberosum HOM05D008254 ORTHO05D010423 1.6e-62 243.4 220 54.5
Cfa005450 Carpinus fangiana HOM05D008254 ORTHO05D010423 4.7e-62 241.9 230 57.8
Oeu009760.1 Olea europaea HOM05D008254 ORTHO05D010423 4.7e-62 241.9 222 58.6
CiPaw.05G054200 Carya illinoinensis HOM05D008254 ORTHO05D010423 1.4e-61 240.4 232 58.6
TWI31G0737 Tripterygium wilfordii HOM05D008254 ORTHO05D010423 1.8e-61 240.0 225 58.7
Sopen10g022350 Solanum pennellii HOM05D008254 ORTHO05D010423 5.2e-61 238.4 221 53.4
Solyc10g150128.1 Solanum lycopersicum HOM05D008254 ORTHO05D010423 1.2e-60 237.3 221 54.3
Nitab4.5_0002673g0060 Nicotiana tabacum HOM05D008254 ORTHO05D010423 2.9e-59 232.6 221 52.9
Cc02_g18530 Coffea canephora HOM05D008254 ORTHO05D010423 3.7e-59 232.3 225 55.1
Thecc.02G097100 Theobroma cacao HOM05D008254 ORTHO05D010423 3.7e-59 232.3 221 53.4
PGR042G1247 Punica granatum HOM05D008254 ORTHO05D010423 1.4e-58 230.3 225 56.0
Haze_01907 Corylus avellana HOM05D008254 ORTHO05D010423 5.4e-58 228.4 255 51.4
Cpa.g.sc62.40 Carica papaya HOM05D008254 ORTHO05D010423 3.9e-56 222.2 213 55.4
Gorai.005G240300 Gossypium raimondii HOM05D008254 ORTHO05D010423 5.0e-56 221.9 233 52.4
Gohir.D02G212300 Gossypium hirsutum HOM05D008254 ORTHO05D010423 8.6e-56 221.1 233 52.4
Hund06184 Selenicereus undatus HOM05D008254 ORTHO05D010423 8.6e-56 221.1 228 53.1
Lsat_1_v5_gn_9_110380 Lactuca sativa HOM05D008254 ORTHO05D010423 3.3e-55 219.2 224 54.0
SalBow6G2473 Salvia bowleyana HOM05D008254 ORTHO05D010423 4.3e-55 218.8 225 52.0
PSO170G6160 Papaver somniferum HOM05D008254 ORTHO05D010423 1.2e-54 217.2 249 48.6
PSO017G7184 Papaver somniferum HOM05D008254 ORTHO05D010423 1.6e-54 216.9 249 48.2
Migut.B00312 Erythranthe guttata HOM05D008254 ORTHO05D010423 6.2e-54 214.9 222 50.9
MSTRG.20136 Avicennia marina HOM05D008254 ORTHO05D010423 1.1e-53 214.2 226 50.0
COL.COLO4_32691 Corchorus olitorius HOM05D008254 ORTHO05D010423 1.1e-53 214.2 209 51.7
HanXRQChr02g0034931 Helianthus annuus HOM05D008254 ORTHO05D010423 4.0e-53 212.2 225 52.0
HanXRQChr02g0034971 Helianthus annuus HOM05D008254 ORTHO05D010423 4.0e-53 212.2 225 52.0
Nitab4.5_0000876g0150 Nicotiana tabacum HOM05D008254 ORTHO05D010423 6.8e-53 211.5 206 53.4
Eucgr.G01497 Eucalyptus grandis HOM05D008254 ORTHO05D010423 4.9e-51 205.3 224 50.9
ECA240G0616 Erigeron canadensis HOM05D008254 ORTHO05D010423 1.1e-50 204.1 224 49.1
Os08g0477600 Oryza sativa ssp. japonica HOM05D008254 ORTHO05D010423 1.1e-50 204.1 245 47.3
Oeu009762.1 Olea europaea HOM05D008254 ORTHO05D010423 3.2e-50 202.6 230 52.2
Aqoxy5G01299 Aquilegia oxysepala HOM05D008254 ORTHO05D010423 1.0e-48 197.6 269 44.6
SGA_v2.0_scaffold32G13109 Striga asiatica HOM05D008254 ORTHO05D010423 4.7e-46 188.7 259 43.6
Eucgr.B00910 Eucalyptus grandis HOM05D008254 ORTHO05D010423 4.6e-41 172.2 149 59.7
MBI06_g07359_MAGBIO Magnolia biondii HOM05D008254 ORTHO05D010423 1.0e-40 171.0 209 47.4
CANSAT25G2647 Cannabis sativa HOM05D008254 ORTHO05D010423 1.7e-40 170.2 251 42.2
Zm00001eb038300 Zea mays HOM05D008254 ORTHO05D010423 1.9e-39 166.8 236 44.5
HPP92_002305 Vanilla planifolia HOM05D008254 ORTHO05D010423 1.8e-37 160.2 219 41.6
Lj9A360G67 Lonicera japonica HOM05D008254 ORTHO05D010423 2.6e-36 156.4 225 44.4
Pp3c8_11550 Physcomitrium patens HOM05D008254 ORTHO05D010423 7.3e-31 138.3 253 38.7
Manes.15G142800 Manihot esculenta HOM05D008254 ORTHO05D010423 6.2e-30 135.2 170 49.4
HanXRQChr02g0034911 Helianthus annuus HOM05D008254 ORTHO05D010423 2.9e-27 126.3 201 38.3
Nn1g05870 Nelumbo nucifera HOM05D008254 ORTHO05D010423 4.9e-27 125.6 188 43.6
Gohir.A03G191400 Gossypium hirsutum HOM05D008254 ORTHO05D010423 8.4e-27 124.8 171 44.4
HanXRQChr12g0367771 Helianthus annuus HOM05D008254 ORTHO05D010423 4.2e-26 122.5 166 45.2
HanXRQChr03g0080261 Helianthus annuus HOM05D008254 ORTHO05D010423 9.3e-26 121.3 166 44.6
HanXRQChr08g0217421 Helianthus annuus HOM05D008254 ORTHO05D010423 9.3e-26 121.3 166 44.6
SGA_v2.0_scaffold32G13097 Striga asiatica HOM05D008254 ORTHO05D010423 9.3e-26 121.3 216 38.9
DCAR_003621 Daucus carota HOM05D008254 ORTHO05D010423 3.5e-25 119.4 166 43.4
Hma1.2p1_3161F.1_g333460 Hydrangea macrophylla HOM05D008254 ORTHO05D010423 1.4e-21 107.5 147 44.9
HanXRQChr08g0217441 Helianthus annuus HOM05D008254 ORTHO05D010423 5.3e-21 105.5 76 61.8
Dinv23586 Davidia involucrata HOM05D008254 ORTHO05D010423 9.9e-20 101.3 161 41.6
Nn3g20147 Nelumbo nucifera HOM05D008254 ORTHO05D010423 9.3e-18 94.7 116 49.1
QL11p037441 Quercus lobata HOM05D008254 ORTHO05D010423 4.6e-17 92.4 108 49.1
QL05p004958 Quercus lobata HOM05D008254 ORTHO05D010423 1.6e-09 67.4 98 42.9
Oeu037642.1 Olea europaea HOM05D008254 ORTHO05D010423 2.7e-09 66.6 54 57.4


User provided reference genes

Program Settings