Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02123 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 1.5e-56 223.0 126 100.0
vmacro02121 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 6.8e-49 197.6 116 97.4
vmacro17186 Vaccinium macrocarpon HOM05D007556 ORTHO05D002252 9.2e-38 160.6 116 82.8
Rhsim11G0175600 Rhododendron simsii HOM05D007556 ORTHO05D002252 2.6e-32 142.5 119 70.6
Rhsim11G0175400 Rhododendron simsii HOM05D007556 ORTHO05D002252 4.4e-32 141.7 116 72.4
Rhsim11G0175100 Rhododendron simsii HOM05D007556 ORTHO05D002252 6.4e-31 137.9 95 67.4
Rhsim11G0175800 Rhododendron simsii HOM05D007556 ORTHO05D002252 6.0e-29 131.3 95 66.3
Actinidia00509 Actinidia chinensis HOM05D007556 ORTHO05D002252 2.1e-18 96.3 90 57.8
Dinv23538 Davidia involucrata HOM05D007556 ORTHO05D002252 4.4e-16 88.6 89 51.7
QL11p043321 Quercus lobata HOM05D007556 ORTHO05D002252 1.3e-15 87.0 95 47.4
TAR628G1474 Trochodendron aralioides HOM05D007556 ORTHO05D002252 6.4e-15 84.7 92 51.1
CSS0014637 Camellia sinensis var. sinensis HOM05D007556 ORTHO05D002252 1.4e-14 83.6 78 53.8
Oeu014344.1 Olea europaea HOM05D007556 ORTHO05D002252 4.1e-14 82.0 69 60.9
TWI79G0288 Tripterygium wilfordii HOM05D007556 ORTHO05D002252 1.6e-13 80.1 103 43.7
TAR628G0569 Trochodendron aralioides HOM05D007556 ORTHO05D002252 1.6e-13 80.1 92 47.8
Potri.009G114701 Populus trichocarpa HOM05D007556 ORTHO05D002252 1.7e-12 76.6 84 45.2
GSVIVG01031948001 Vitis vinifera HOM05D007556 ORTHO05D002252 2.3e-12 76.3 98 42.9
Potri.009G114800 Populus trichocarpa HOM05D007556 ORTHO05D002252 1.5e-11 73.6 84 45.2
CSS0039349 Camellia sinensis var. sinensis HOM05D007556 ORTHO05D002252 1.9e-11 73.2 81 48.1
Peaxi162Scf00684g00413 Petunia axillaris HOM05D007556 ORTHO05D002252 1.9e-11 73.2 96 41.7
Nitab4.5_0000959g0110 Nicotiana tabacum HOM05D007556 ORTHO05D002252 3.3e-11 72.4 115 38.3
Thecc.02G086800 Theobroma cacao HOM05D007556 ORTHO05D002252 4.3e-11 72.0 86 46.5
Cfa005014 Carpinus fangiana HOM05D007556 ORTHO05D002252 1.2e-10 70.5 93 38.7
COL.COLO4_11793 Corchorus olitorius HOM05D007556 ORTHO05D002252 1.2e-10 70.5 80 50.0
GSVIVG01031943001 Vitis vinifera HOM05D007556 ORTHO05D002252 1.2e-10 70.5 77 45.5
Cfa005016 Carpinus fangiana HOM05D007556 ORTHO05D002252 1.6e-10 70.1 85 41.2
Prupe.8G098800 Prunus persica HOM05D007556 ORTHO05D002252 2.1e-10 69.7 87 43.7
Prupe.8G099600 Prunus persica HOM05D007556 ORTHO05D002252 2.8e-10 69.3 87 41.4
Aqoxy5G01653 Aquilegia oxysepala HOM05D007556 ORTHO05D002252 1.1e-09 67.4 107 37.4
Duzib132G0033 Durio zibethinus HOM05D007556 ORTHO05D002252 1.1e-09 67.4 115 36.5
SGA_v2.0_scaffold55G19792 Striga asiatica HOM05D007556 ORTHO05D002252 1.4e-09 67.0 88 36.4
Aqoxy2G01755 Aquilegia oxysepala HOM05D003825 ORTHO05D004491 2.4e-09 66.2 107 36.4
Cc05_g01670 Coffea canephora HOM05D007556 ORTHO05D002252 3.1e-09 65.9 97 40.2
Prupe.8G099400 Prunus persica HOM05D007556 ORTHO05D002252 4.0e-09 65.5 87 40.2
CiPaw.06G136500 Carya illinoinensis HOM05D007556 ORTHO05D002252 5.2e-09 65.1 92 40.2
Nitab4.5_0010789g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 5.2e-09 65.1 96 37.5
DCAR_022107 Daucus carota HOM05D007556 ORTHO05D002252 8.9e-09 64.3 84 39.3
Peaxi162Scf00152g00130 Petunia axillaris HOM05D007556 ORTHO05D002252 8.9e-09 64.3 79 46.8
Atru.chr5.2996 Acer truncatum HOM05D007556 ORTHO05D002252 1.2e-08 63.9 93 41.9
COL.COLO4_37463 Corchorus olitorius HOM05D007556 ORTHO05D002252 1.2e-08 63.9 74 50.0
Nitab4.5_0002168g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.0e-08 63.2 96 39.6
Eucgr.G00440 Eucalyptus grandis HOM05D040694 ORTHO05D002252 2.6e-08 62.8 88 40.9
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.6e-08 62.8 88 42.0
Sc18g0004580 Simmondsia chinensis HOM05D007556 ORTHO05D002252 2.6e-08 62.8 91 36.3
Gohir.D04G164160 Gossypium hirsutum HOM05D007556 ORTHO05D002252 4.4e-08 62.0 94 39.4
CiPaw.06G136300 Carya illinoinensis HOM05D007556 ORTHO05D002252 5.8e-08 61.6 116 32.8
Gorai.012G152300 Gossypium raimondii HOM05D007556 ORTHO05D002252 5.8e-08 61.6 94 39.4
Hma1.2p1_0066F.1_g036560 Hydrangea macrophylla HOM05D007556 ORTHO05D002252 5.8e-08 61.6 77 44.2
PGR042G1382 Punica granatum HOM05D007556 ORTHO05D002252 5.8e-08 61.6 106 35.8
Gohir.A04G122100 Gossypium hirsutum HOM05D007556 ORTHO05D002252 7.6e-08 61.2 94 39.4
Nitab4.5_0002102g0030 Nicotiana tabacum HOM05D007556 ORTHO05D002252 7.6e-08 61.2 96 38.5
Dinv23539 Davidia involucrata HOM05D007227 ORTHO05D002252 9.9e-08 60.8 85 40.0
Nitab4.5_0000618g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 9.9e-08 60.8 96 38.5
QL11p043287 Quercus lobata HOM05D007227 ORTHO05D002252 9.9e-08 60.8 92 40.2
Thecc.02G086700 Theobroma cacao HOM05D007556 ORTHO05D002252 9.9e-08 60.8 79 43.0
GSVIVG01031940001 Vitis vinifera HOM05D007227 ORTHO05D002252 9.9e-08 60.8 79 40.5
Cc02_g17690 Coffea canephora HOM05D007556 ORTHO05D002252 1.7e-07 60.1 102 37.3
Nitab4.5_0002892g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.7e-07 60.1 92 40.2
Nitab4.5_0000295g0010 Nicotiana tabacum HOM05D007556 ORTHO05D002252 2.2e-07 59.7 88 40.9
PGSC0003DMG400010828 Solanum tuberosum HOM05D007556 ORTHO05D002252 2.9e-07 59.3 93 35.5
Dinv42073 Davidia involucrata HOM05D007227 ORTHO05D002252 3.8e-07 58.9 85 32.9
PGR042G3705 Punica granatum HOM05D007556 ORTHO05D002252 3.8e-07 58.9 106 34.9
Manes.07G098300 Manihot esculenta HOM05D007556 ORTHO05D002252 6.4e-07 58.2 78 44.9
COL.COLO4_17856 Corchorus olitorius HOM05D007227 ORTHO05D002252 1.4e-06 57.0 73 45.2
Lj3g0003579 Lotus japonicus HOM05D010359 ORTHO05D002252 1.9e-06 56.6 83 34.9
Nitab4.5_0002168g0020 Nicotiana tabacum HOM05D007556 ORTHO05D002252 1.9e-06 56.6 81 42.0
Psat0s1116g0120 Pisum sativum HOM05D010359 ORTHO05D002252 1.9e-06 56.6 81 43.2
Thecc.02G037700 Theobroma cacao HOM05D007227 ORTHO05D002252 2.4e-06 56.2 71 43.7
COL.COLO4_25915 Corchorus olitorius HOM05D007556 ORTHO05D002252 3.2e-06 55.8 100 34.0
Gohir.A03G212200 Gossypium hirsutum HOM05D007227 ORTHO05D002252 3.2e-06 55.8 78 39.7
Gohir.D02G233600 Gossypium hirsutum HOM05D007227 ORTHO05D002252 3.2e-06 55.8 78 39.7
Gorai.005G261600 Gossypium raimondii HOM05D007227 ORTHO05D002252 3.2e-06 55.8 78 39.7
Lj3g0013453 Lotus japonicus HOM05D010359 ORTHO05D002252 3.2e-06 55.8 80 35.0
Psat7g116800 Pisum sativum HOM05D010359 ORTHO05D002252 3.2e-06 55.8 73 42.5
Solyc07g016215.1 Solanum lycopersicum HOM05D007556 ORTHO05D002252 3.2e-06 55.8 96 32.3
AUR62016714 Chenopodium quinoa HOM05D013587 ORTHO05D002252 4.2e-06 55.5 89 31.5
Aqoxy5G01668 Aquilegia oxysepala HOM05D007556 ORTHO05D002252 5.4e-06 55.1 97 39.2
CANSAT56G4301 Cannabis sativa HOM05D007556 ORTHO05D002252 5.4e-06 55.1 82 37.8
Solyc10g009150.3 Solanum lycopersicum HOM05D007556 ORTHO05D002252 5.4e-06 55.1 83 36.1
CANSAT56G0346 Cannabis sativa HOM05D007556 ORTHO05D002252 7.1e-06 54.7 86 33.7
Manes.07G098400 Manihot esculenta HOM05D007556 ORTHO05D002252 7.1e-06 54.7 78 41.0
CAN.G132.5 Capsicum annuum HOM05D007556 ORTHO05D002252 9.2e-06 54.3 83 38.6
MD00G1082000 Malus domestica HOM05D007227 ORTHO05D002252 9.2e-06 54.3 73 45.2
Prupe.8G098600 Prunus persica HOM05D007556 ORTHO05D002252 9.2e-06 54.3 87 35.6


User provided reference genes

Program Settings