Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02106 Vaccinium macrocarpon HOM05D001579 ORTHO05D003470 4.3e-59 231.1 114 100.0
vmacro11113 Vaccinium macrocarpon HOM05D001579 ORTHO05D003470 2.3e-33 145.6 83 85.5
Nn1g01939 Nelumbo nucifera HOM05D001579 ORTHO05D003470 4.6e-21 104.8 61 83.6
TAR376G1017 Trochodendron aralioides HOM05D001579 ORTHO05D003470 1.0e-20 103.6 61 82.0
Solyc02g090860.3 Solanum lycopersicum HOM05D001579 ORTHO05D003470 1.3e-20 103.2 61 82.0
Oeu041647.1 Olea europaea HOM05D001579 ORTHO05D003470 1.7e-20 102.8 60 83.3
Rhsim11G0177200 Rhododendron simsii HOM05D001579 ORTHO05D003470 3.0e-20 102.1 61 82.0
FAN16G2055 Fragaria x ananassa HOM05D001579 ORTHO05D003470 3.9e-20 101.7 74 66.2
Solyc10g007060.4 Solanum lycopersicum HOM05D001579 ORTHO05D003470 3.9e-20 101.7 61 80.3
Sopen02g035480 Solanum pennellii HOM05D001579 ORTHO05D003470 3.9e-20 101.7 61 80.3
Sopen10g002960 Solanum pennellii HOM05D001579 ORTHO05D003470 3.9e-20 101.7 61 80.3
PGSC0003DMG400004021 Solanum tuberosum HOM05D001579 ORTHO05D003470 3.9e-20 101.7 61 80.3
GSVIVG01031967001 Vitis vinifera HOM05D001579 ORTHO05D003470 3.9e-20 101.7 60 81.7
Aa31LG7G14810 Aethionema arabicum HOM05D001579 ORTHO05D003470 5.1e-20 101.3 62 80.6
Cpa.g.sc62.152 Carica papaya HOM05D001579 ORTHO05D003470 5.1e-20 101.3 60 83.3
Migut.B00751 Erythranthe guttata HOM05D001579 ORTHO05D003470 5.1e-20 101.3 60 81.7
AL7G11270 Arabidopsis lyrata HOM05D001579 ORTHO05D003470 6.6e-20 100.9 61 80.3
AT4G39280 Arabidopsis thaliana HOM05D001579 ORTHO05D003470 6.6e-20 100.9 61 80.3
Cc02_g25810 Coffea canephora HOM05D001579 ORTHO05D003470 6.6e-20 100.9 60 80.0
Oeu015994.1 Olea europaea HOM05D001579 ORTHO05D003470 6.6e-20 100.9 60 81.7
TAR628G1064 Trochodendron aralioides HOM05D001579 ORTHO05D003470 6.6e-20 100.9 61 80.3
Actinidia00524 Actinidia chinensis HOM05D001579 ORTHO05D003470 8.7e-20 100.5 65 78.5
BcaB08g35003 Brassica carinata HOM05D001579 ORTHO05D003470 8.7e-20 100.5 60 81.7
HanXRQChr14g0437911 Helianthus annuus HOM05D001579 ORTHO05D003470 8.7e-20 100.5 60 80.0
HanXRQChr14g0446281 Helianthus annuus HOM05D001579 ORTHO05D003470 8.7e-20 100.5 60 80.0
SHI02914 Sapria himalayana HOM05D001579 ORTHO05D003470 8.7e-20 100.5 61 82.0
PGSC0003DMG400025010 Solanum tuberosum HOM05D001579 ORTHO05D003470 8.7e-20 100.5 61 78.7
BcaB03g12963 Brassica carinata HOM05D001579 ORTHO05D003470 1.1e-19 100.1 60 81.7
CAN.G1412.7 Capsicum annuum HOM05D001579 ORTHO05D003470 1.1e-19 100.1 61 78.7
ECA240G1027 Erigeron canadensis HOM05D001579 ORTHO05D003470 1.1e-19 100.1 60 78.3
Lj2C359T3 Lonicera japonica HOM05D001579 ORTHO05D003470 1.1e-19 100.1 60 80.0
Sabra04G0102800 Salix brachista HOM05D001579 ORTHO05D003470 1.1e-19 100.1 62 77.4
Sp4g00870 Schrenkiella parvula HOM05D001579 ORTHO05D003470 1.1e-19 100.1 60 81.7
SGA_v2.0_scaffold58G20534 Striga asiatica HOM05D001579 ORTHO05D003470 1.1e-19 100.1 60 80.0
CAN.G1298.23 Capsicum annuum HOM05D001579 ORTHO05D003470 1.5e-19 99.8 61 78.7
Thhalv10007412m.g Eutrema salsugineum HOM05D001579 ORTHO05D003470 1.5e-19 99.8 60 80.0
MBI01_g34891_MAGBIO Magnolia biondii HOM05D001579 ORTHO05D003470 1.5e-19 99.8 60 80.0
Potri.004G155000 Populus trichocarpa HOM05D001579 ORTHO05D003470 1.5e-19 99.8 60 80.0
Potri.009G116100 Populus trichocarpa HOM05D001579 ORTHO05D003470 1.5e-19 99.8 61 78.7
Sc13g0008990 Simmondsia chinensis HOM05D001579 ORTHO05D003470 1.5e-19 99.8 60 80.0
EL10Ac3g05071 Beta vulgaris HOM05D001579 ORTHO05D003470 1.9e-19 99.4 60 81.7
CARHR247410 Cardamine hirsuta HOM05D001579 ORTHO05D003470 1.9e-19 99.4 60 80.0
SalBow6G0592 Salvia bowleyana HOM05D001579 ORTHO05D003470 1.9e-19 99.4 61 78.7
SalBow6G1678 Salvia bowleyana HOM05D001579 ORTHO05D003470 1.9e-19 99.4 61 78.7
SGA_v2.0_scaffold32G13167 Striga asiatica HOM05D001579 ORTHO05D003470 1.9e-19 99.4 69 72.5
MSTRG.16808 Avicennia marina HOM05D001579 ORTHO05D003470 2.5e-19 99.0 60 80.0
BcaC07g41119 Brassica carinata HOM05D001579 ORTHO05D003470 2.5e-19 99.0 60 80.0
A09p57990 Brassica napus HOM05D001579 ORTHO05D003470 2.5e-19 99.0 60 80.0
C08p41200 Brassica napus HOM05D001579 ORTHO05D003470 2.5e-19 99.0 60 80.0
BolC8t51687H Brassica oleracea HOM05D001579 ORTHO05D003470 2.5e-19 99.0 60 80.0
BraA09t41189Z Brassica rapa HOM05D001579 ORTHO05D003470 2.5e-19 99.0 60 80.0
Ciclev10028310m.g Citrus clementina HOM05D001579 ORTHO05D003470 2.5e-19 99.0 60 81.7
Lsat_1_v5_gn_2_67440 Lactuca sativa HOM05D001579 ORTHO05D003470 2.5e-19 99.0 60 78.3
DCAR_006199 Daucus carota HOM05D001579 ORTHO05D003470 3.3e-19 98.6 62 77.4
Ah.02g117280 Amaranthus hybridus HOM05D001579 ORTHO05D003470 4.3e-19 98.2 60 80.0
Carub.0004s0076 Capsella rubella HOM05D001579 ORTHO05D003470 4.3e-19 98.2 60 80.0
Cfa005003 Carpinus fangiana HOM05D001579 ORTHO05D003470 4.3e-19 98.2 61 80.3
Lj7A248G12 Lonicera japonica HOM05D001579 ORTHO05D003470 4.3e-19 98.2 60 80.0
MD10G1076200 Malus domestica HOM05D001579 ORTHO05D003470 5.6e-19 97.8 61 77.0
Sed0021732 Sechium edule HOM05D001579 ORTHO05D003470 5.6e-19 97.8 60 78.3
AL4G10950 Arabidopsis lyrata HOM05D001579 ORTHO05D003470 7.3e-19 97.4 60 78.3
AUR62003165 Chenopodium quinoa HOM05D001579 ORTHO05D003470 7.3e-19 97.4 60 80.0
AUR62034498 Chenopodium quinoa HOM05D001579 ORTHO05D003470 7.3e-19 97.4 60 80.0
FAN24G0111 Fragaria x ananassa HOM05D001579 ORTHO05D003470 7.3e-19 97.4 63 76.2
Glyma.11G117800 Glycine max HOM05D001579 ORTHO05D003470 7.3e-19 97.4 60 78.3
Lalb_Chr01g0002541 Lupinus albus HOM05D001579 ORTHO05D003470 7.3e-19 97.4 60 78.3
PGR042G0613 Punica granatum HOM05D001579 ORTHO05D003470 7.3e-19 97.4 61 77.0
Ah.12g056190 Amaranthus hybridus HOM05D001579 ORTHO05D006780 9.6e-19 97.1 60 80.0
CsaV3_3G002020 Cucumis sativus L. HOM05D001579 ORTHO05D003470 9.6e-19 97.1 60 76.7
Manes.17G101200 Manihot esculenta HOM05D001579 ORTHO05D003470 9.6e-19 97.1 61 77.0
Nitab4.5_0000974g0080 Nicotiana tabacum HOM05D001579 ORTHO05D003470 9.6e-19 97.1 61 78.7
Nitab4.5_0011688g0020 Nicotiana tabacum HOM05D001579 ORTHO05D003470 9.6e-19 97.1 61 78.7
THA.LOC104824827 Tarenaya hassleriana HOM05D001579 ORTHO05D003470 9.6e-19 97.1 60 78.3
Haze_02385 Corylus avellana HOM05D001579 ORTHO05D003470 1.3e-18 96.7 60 80.0
Glyma.12G043200 Glycine max HOM05D001579 ORTHO05D003470 1.3e-18 96.7 60 76.7
QL11p043704 Quercus lobata HOM05D001579 ORTHO05D003470 1.3e-18 96.7 61 78.7
CSS0005142 Camellia sinensis var. sinensis HOM05D001579 ORTHO05D003470 1.6e-18 96.3 61 78.7
CSS0013099 Camellia sinensis var. sinensis HOM05D001579 ORTHO05D003470 1.6e-18 96.3 61 78.7
CSS0031219 Camellia sinensis var. sinensis HOM05D001579 ORTHO05D003470 1.6e-18 96.3 61 78.7
CSS0049673 Camellia sinensis var. sinensis HOM05D001579 ORTHO05D003470 1.6e-18 96.3 61 78.7
CDE04G1236 Ceratophyllum demersum HOM05D001579 ORTHO05D003470 1.6e-18 96.3 61 77.0
Duzib052G0487 Durio zibethinus HOM05D001579 ORTHO05D003470 1.6e-18 96.3 60 78.3
SEGI_28257 Sequoiadendron giganteum HOM05D001579 ORTHO05D003470 1.6e-18 96.3 61 73.8
THA.LOC104804143 Tarenaya hassleriana HOM05D001579 ORTHO05D003470 1.6e-18 96.3 60 76.7
Actinidia27894 Actinidia chinensis HOM05D001579 ORTHO05D003470 2.1e-18 95.9 61 77.0
ATR0051G048 Amborella trichopoda HOM05D001579 ORTHO05D003470 2.1e-18 95.9 61 75.4
BcaB06g27782 Brassica carinata HOM05D001579 ORTHO05D003470 2.1e-18 95.9 60 78.3
AUR62007985 Chenopodium quinoa HOM05D001579 ORTHO05D003470 2.1e-18 95.9 60 78.3
AUR62034190 Chenopodium quinoa HOM05D001579 ORTHO05D003470 2.1e-18 95.9 60 80.0
MELO3C013873.2 Cucumis melo HOM05D001579 ORTHO05D003470 2.1e-18 95.9 60 75.0
FAN15G0032 Fragaria x ananassa HOM05D001579 ORTHO05D003470 2.1e-18 95.9 61 77.0
FAN27G2756 Fragaria x ananassa HOM05D001579 ORTHO05D003470 2.1e-18 95.9 61 77.0
RcHm_v2.0_Chr6g0264251 Rosa chinensis HOM05D001579 ORTHO05D003470 2.1e-18 95.9 61 77.0
Hund14641 Selenicereus undatus HOM05D001579 ORTHO05D003470 2.1e-18 95.9 60 78.3
Gohir.A04G130900 Gossypium hirsutum HOM05D001579 ORTHO05D003470 2.8e-18 95.5 61 77.0
Nitab4.5_0004172g0030 Nicotiana tabacum HOM05D001579 ORTHO05D003470 2.8e-18 95.5 66 74.2
Peaxi162Scf00016g00732 Petunia axillaris HOM05D001579 ORTHO05D003470 2.8e-18 95.5 61 77.0
Thecc.02G085100 Theobroma cacao HOM05D001579 ORTHO05D003470 2.8e-18 95.5 65 73.8
TPR.G23438 Trifolium pratense HOM05D001579 ORTHO05D003470 2.8e-18 95.5 60 76.7
Carub.0007s0120 Capsella rubella HOM05D001579 ORTHO05D003470 3.6e-18 95.1 60 76.7
FAN16G0460 Fragaria x ananassa HOM05D001579 ORTHO05D003470 3.6e-18 95.1 61 77.0
MD05G1066200 Malus domestica HOM05D001579 ORTHO05D003470 3.6e-18 95.1 61 75.4
Nitab4.5_0000308g0090 Nicotiana tabacum HOM05D001579 ORTHO05D003470 3.6e-18 95.1 61 78.7
CANSAT80G0427 Cannabis sativa HOM05D001579 ORTHO05D003470 4.8e-18 94.7 60 78.3
CDE06G1318 Ceratophyllum demersum HOM05D001579 ORTHO05D003470 4.8e-18 94.7 61 75.4
PSO447G0328 Papaver somniferum HOM05D001579 ORTHO05D003470 4.8e-18 94.7 60 73.3
PSO478G3633 Papaver somniferum HOM05D001579 ORTHO05D003470 4.8e-18 94.7 60 73.3
Prupe.8G096800 Prunus persica HOM05D001579 ORTHO05D003470 4.8e-18 94.7 60 75.0
ClCG10G001880 Citrullus lanatus HOM05D001579 ORTHO05D003470 6.2e-18 94.4 64 71.9
Duzib132G0542 Durio zibethinus HOM05D001579 ORTHO05D003470 6.2e-18 94.4 60 76.7
Eucgr.D00245 Eucalyptus grandis HOM05D001579 ORTHO05D003470 6.2e-18 94.4 60 76.7
unitig_0.g66 Utricularia gibba HOM05D001579 ORTHO05D003470 6.2e-18 94.4 61 73.8
C04p50830 Brassica napus HOM05D001579 ORTHO05D003470 8.1e-18 94.0 60 78.3
FvH4_2g08790 Fragaria vesca HOM05D001579 ORTHO05D003470 8.1e-18 94.0 61 75.4
Gohir.D04G167200 Gossypium hirsutum HOM05D001579 ORTHO05D003470 8.1e-18 94.0 61 75.4
Phvul.011G045200 Phaseolus vulgaris HOM05D001579 ORTHO05D003470 8.1e-18 94.0 60 78.3
VMungo1127G1806 Vigna mungo HOM05D001579 ORTHO05D003470 8.1e-18 94.0 60 78.3
Atru.chr5.3017 Acer truncatum HOM05D001579 ORTHO05D003470 1.1e-17 93.6 60 76.7
FvH4_3g28200 Fragaria vesca HOM05D001579 ORTHO05D003470 1.1e-17 93.6 61 75.4
FAN11G3917 Fragaria x ananassa HOM05D001579 ORTHO05D003470 1.1e-17 93.6 61 75.4
FAN21G0623 Fragaria x ananassa HOM05D001579 ORTHO05D003470 1.1e-17 93.6 61 75.4
Lj3g0013700 Lotus japonicus HOM05D001579 ORTHO05D003470 1.1e-17 93.6 60 75.0
Medtr4g070040 Medicago truncatula HOM05D001579 ORTHO05D003470 1.1e-17 93.6 60 75.0
Ca_01102_v3 Cicer arietinum L. HOM05D001579 ORTHO05D003470 1.4e-17 93.2 60 75.0
Duzib248G1006 Durio zibethinus HOM05D001579 ORTHO05D003470 1.4e-17 93.2 65 73.8
Lj1g0020223 Lotus japonicus HOM05D001579 ORTHO05D003470 1.4e-17 93.2 60 76.7
RcHm_v2.0_Chr7g0204471 Rosa chinensis HOM05D001579 ORTHO05D003470 1.4e-17 93.2 60 78.3
ATR1101G101 Amborella trichopoda HOM05D001579 ORTHO05D003470 1.8e-17 92.8 61 72.1
Carub.0005s1088 Capsella rubella HOM05D001579 ORTHO05D003470 1.8e-17 92.8 60 75.0
Gorai.012G155500 Gossypium raimondii HOM05D001579 ORTHO05D003470 1.8e-17 92.8 61 73.8
Hund11566 Selenicereus undatus HOM05D001579 ORTHO05D003470 1.8e-17 92.8 60 76.7
Solyc02g061620.2 Solanum lycopersicum HOM05D001579 ORTHO05D003470 1.8e-17 92.8 59 76.3
arahy.Tifrunner.gnm1.ann1.D5Q7RU Arachis hypogaea HOM05D001579 ORTHO05D003470 2.4e-17 92.4 60 75.0
A04p16340 Brassica napus HOM05D001579 ORTHO05D003470 3.1e-17 92.0 60 76.7
BraA04t17272Z Brassica rapa HOM05D001579 ORTHO05D003470 3.1e-17 92.0 60 76.7
CiPaw.05G064600 Carya illinoinensis HOM05D001579 ORTHO05D003470 3.1e-17 92.0 65 70.8
Lalb_Chr03g0025681 Lupinus albus HOM05D001579 ORTHO05D003470 3.1e-17 92.0 60 73.3
BcaC02g08772 Brassica carinata HOM05D001579 ORTHO05D003470 4.0e-17 91.7 60 76.7
BolC4t26677H Brassica oleracea HOM05D001579 ORTHO05D003470 4.0e-17 91.7 60 76.7
COL.COLO4_25932 Corchorus olitorius HOM05D001579 ORTHO05D003470 4.0e-17 91.7 60 73.3
Psat7g141360 Pisum sativum HOM05D001579 ORTHO05D003470 4.0e-17 91.7 60 75.0
Solyc01g081220.2 Solanum lycopersicum HOM05D001579 ORTHO05D003470 4.0e-17 91.7 65 72.3
AL7G31990 Arabidopsis lyrata HOM05D001579 ORTHO05D003470 6.9e-17 90.9 60 75.0
TPR.G19411 Trifolium pratense HOM05D001579 ORTHO05D003470 6.9e-17 90.9 60 73.3
TWI79G0010 Tripterygium wilfordii HOM05D001579 ORTHO05D003470 6.9e-17 90.9 60 73.3
Os10g0400800 Oryza sativa ssp. japonica HOM05D001579 ORTHO05D003470 1.2e-16 90.1 60 70.0
Glyma.17G231300 Glycine max HOM05D001579 ORTHO05D003470 1.5e-16 89.7 59 74.6
Zm00001eb255720 Zea mays HOM05D001579 ORTHO05D003470 1.5e-16 89.7 60 68.3
CBR_g23301 Chara braunii HOM05D001579 ORTHO05D003470 7.6e-16 87.4 60 70.0
Pp3c2_16770 Physcomitrium patens HOM05D001579 ORTHO05D003470 2.9e-15 85.5 60 70.0
Rhsim05G0074300 Rhododendron simsii HOM05D001579 ORTHO05D003470 8.4e-15 84.0 52 80.8
BcaC08g46253 Brassica carinata HOM05D001579 ORTHO05D003470 1.4e-14 83.2 60 71.7
BcaC08g46255 Brassica carinata HOM05D001579 ORTHO05D003470 1.4e-14 83.2 60 71.7
Hma1.2p1_0633F.1_g192550 Hydrangea macrophylla HOM05D001579 ORTHO05D003470 1.4e-14 83.2 60 70.0
Hma1.2p1_1375F.1_g279070 Hydrangea macrophylla HOM05D001579 ORTHO05D003470 1.4e-14 83.2 60 70.0
Mapoly0012s0145 Marchantia polymorpha HOM05D001579 ORTHO05D003470 2.4e-14 82.4 60 66.7
PRCOL_00000627 Prasinoderma coloniale HOM05D001579 ORTHO05D003470 4.2e-14 81.6 60 66.7
Hma1.2p1_3239F.1_g334310 Hydrangea macrophylla HOM05D001579 ORTHO05D003470 5.4e-14 81.3 61 67.2
Aqoxy7G01384 Aquilegia oxysepala HOM05D001579 ORTHO05D003470 7.1e-14 80.9 60 63.3
SMO119G0093 Selaginella moellendorffii HOM05D001579 ORTHO05D003470 1.6e-13 79.7 60 63.3
AagrBONN_evm.TU.Sc2ySwM_344.2010 Anthoceros agrestis HOM05D001579 ORTHO05D003470 4.6e-13 78.2 53 71.7
Cre09.g389430 Chlamydomonas reinhardtii HOM05D001579 ORTHO05D003470 6.7e-12 74.3 53 69.8
MCO10G005 Micromonas commoda HOM05D001579 ORTHO05D003470 1.1e-11 73.6 65 55.4
QL11p044403 Quercus lobata HOM05D001579 ORTHO05D003470 3.1e-09 65.5 67 53.7
BcaB03g15109 Brassica carinata HOM05D001579 ORTHO05D003470 4.9e-07 58.2 54 61.1


User provided reference genes

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