Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02105 Vaccinium macrocarpon HOM05D001579 ORTHO05D003470 2.6e-132 475.3 228 100.0
vmacro11113 Vaccinium macrocarpon HOM05D001579 ORTHO05D003470 3.2e-50 202.6 134 77.6
Duzib052G0487 Durio zibethinus HOM05D001579 ORTHO05D003470 1.5e-47 193.7 134 73.9
CSS0013099 Camellia sinensis var. sinensis HOM05D001579 ORTHO05D003470 2.0e-47 193.4 134 73.9
CSS0031219 Camellia sinensis var. sinensis HOM05D001579 ORTHO05D003470 2.0e-47 193.4 134 73.9
CSS0049673 Camellia sinensis var. sinensis HOM05D001579 ORTHO05D003470 2.0e-47 193.4 134 73.9
Nn1g01939 Nelumbo nucifera HOM05D001579 ORTHO05D003470 2.6e-47 193.0 134 73.9
GSVIVG01031967001 Vitis vinifera HOM05D001579 ORTHO05D003470 2.6e-47 193.0 134 73.1
ATR1101G101 Amborella trichopoda HOM05D001579 ORTHO05D003470 3.4e-47 192.6 140 69.3
AT4G39280 Arabidopsis thaliana HOM05D001579 ORTHO05D003470 3.4e-47 192.6 134 73.1
BcaB08g35003 Brassica carinata HOM05D001579 ORTHO05D003470 4.4e-47 192.2 134 73.1
Gohir.A04G130900 Gossypium hirsutum HOM05D001579 ORTHO05D003470 4.4e-47 192.2 134 72.4
Gohir.D04G167200 Gossypium hirsutum HOM05D001579 ORTHO05D003470 4.4e-47 192.2 134 72.4
Gorai.012G155500 Gossypium raimondii HOM05D001579 ORTHO05D003470 4.4e-47 192.2 134 72.4
Cpa.g.sc62.152 Carica papaya HOM05D001579 ORTHO05D003470 5.7e-47 191.8 134 73.9
MBI01_g34891_MAGBIO Magnolia biondii HOM05D001579 ORTHO05D003470 5.7e-47 191.8 135 72.6
Rhsim11G0177200 Rhododendron simsii HOM05D001579 ORTHO05D003470 5.7e-47 191.8 134 73.1
TAR628G1064 Trochodendron aralioides HOM05D001579 ORTHO05D003470 5.7e-47 191.8 134 73.1
AL7G11270 Arabidopsis lyrata HOM05D001579 ORTHO05D003470 7.5e-47 191.4 134 73.1
Carub.0007s0120 Capsella rubella HOM05D001579 ORTHO05D003470 7.5e-47 191.4 134 73.1
Hma1.2p1_1375F.1_g279070 Hydrangea macrophylla HOM05D001579 ORTHO05D003470 7.5e-47 191.4 134 73.1
THA.LOC104804143 Tarenaya hassleriana HOM05D001579 ORTHO05D003470 7.5e-47 191.4 134 73.9
Actinidia00524 Actinidia chinensis HOM05D001579 ORTHO05D003470 1.3e-46 190.7 134 73.1
Actinidia27894 Actinidia chinensis HOM05D001579 ORTHO05D003470 1.3e-46 190.7 134 72.4
Aa31LG7G14810 Aethionema arabicum HOM05D001579 ORTHO05D003470 1.3e-46 190.7 134 73.1
Eucgr.D00245 Eucalyptus grandis HOM05D001579 ORTHO05D003470 1.3e-46 190.7 134 72.4
Hma1.2p1_0299F.1_g117910 Hydrangea macrophylla HOM05D001579 ORTHO05D003470 1.3e-46 190.7 165 62.4
Sp4g00870 Schrenkiella parvula HOM05D001579 ORTHO05D003470 1.3e-46 190.7 134 73.1
THA.LOC104824827 Tarenaya hassleriana HOM05D001579 ORTHO05D003470 1.7e-46 190.3 134 73.1
Thecc.02G085100 Theobroma cacao HOM05D001579 ORTHO05D003470 1.7e-46 190.3 134 72.4
TAR376G1017 Trochodendron aralioides HOM05D001579 ORTHO05D003470 1.7e-46 190.3 134 73.1
Atru.chr5.3017 Acer truncatum HOM05D001579 ORTHO05D003470 2.2e-46 189.9 134 73.1
Hma1.2p1_0633F.1_g192550 Hydrangea macrophylla HOM05D001579 ORTHO05D003470 2.2e-46 189.9 134 72.4
Sc13g0008990 Simmondsia chinensis HOM05D001579 ORTHO05D003470 2.2e-46 189.9 134 72.4
Nitab4.5_0000974g0080 Nicotiana tabacum HOM05D001579 ORTHO05D003470 2.8e-46 189.5 134 72.4
Nitab4.5_0011688g0020 Nicotiana tabacum HOM05D001579 ORTHO05D003470 2.8e-46 189.5 134 72.4
Oeu015994.1 Olea europaea HOM05D001579 ORTHO05D003470 2.8e-46 189.5 134 72.4
AL4G10950 Arabidopsis lyrata HOM05D001579 ORTHO05D003470 3.7e-46 189.1 134 73.1
BcaC07g41119 Brassica carinata HOM05D001579 ORTHO05D003470 3.7e-46 189.1 134 71.6
CANSAT80G0427 Cannabis sativa HOM05D001579 ORTHO05D003470 3.7e-46 189.1 134 71.6
MD05G1066200 Malus domestica HOM05D001579 ORTHO05D003470 3.7e-46 189.1 134 72.4
MD10G1076200 Malus domestica HOM05D001579 ORTHO05D003470 3.7e-46 189.1 134 72.4
Nitab4.5_0004172g0030 Nicotiana tabacum HOM05D001579 ORTHO05D003470 3.7e-46 189.1 138 69.6
CAN.G1298.23 Capsicum annuum HOM05D001579 ORTHO05D003470 4.8e-46 188.7 134 71.6
Prupe.8G096800 Prunus persica HOM05D001579 ORTHO05D003470 4.8e-46 188.7 134 71.6
CAN.G1412.7 Capsicum annuum HOM05D001579 ORTHO05D003470 6.3e-46 188.3 134 71.6
Sed0021732 Sechium edule HOM05D001579 ORTHO05D003470 6.3e-46 188.3 134 70.9
Solyc02g090860.3 Solanum lycopersicum HOM05D001579 ORTHO05D003470 6.3e-46 188.3 134 71.6
Solyc10g007060.4 Solanum lycopersicum HOM05D001579 ORTHO05D003470 6.3e-46 188.3 134 71.6
Sopen02g035480 Solanum pennellii HOM05D001579 ORTHO05D003470 6.3e-46 188.3 134 71.6
Sopen10g002960 Solanum pennellii HOM05D001579 ORTHO05D003470 6.3e-46 188.3 134 71.6
PGSC0003DMG400004021 Solanum tuberosum HOM05D001579 ORTHO05D003470 6.3e-46 188.3 134 71.6
PGSC0003DMG400025010 Solanum tuberosum HOM05D001579 ORTHO05D003470 6.3e-46 188.3 134 71.6
Ciclev10028310m.g Citrus clementina HOM05D001579 ORTHO05D003470 8.3e-46 188.0 134 71.6
Migut.B00751 Erythranthe guttata HOM05D001579 ORTHO05D003470 8.3e-46 188.0 149 67.8
ATR0051G048 Amborella trichopoda HOM05D001579 ORTHO05D003470 1.1e-45 187.6 134 70.9
CARHR247410 Cardamine hirsuta HOM05D001579 ORTHO05D003470 1.1e-45 187.6 134 70.1
Lj7A248G12 Lonicera japonica HOM05D001579 ORTHO05D003470 1.1e-45 187.6 134 71.6
Oeu041647.1 Olea europaea HOM05D001579 ORTHO05D003470 1.1e-45 187.6 134 71.6
MSTRG.16808 Avicennia marina HOM05D001579 ORTHO05D003470 1.4e-45 187.2 134 70.9
EL10Ac3g05071 Beta vulgaris HOM05D001579 ORTHO05D003470 1.4e-45 187.2 134 70.1
CDE04G1236 Ceratophyllum demersum HOM05D001579 ORTHO05D003470 1.4e-45 187.2 134 70.1
CDE06G1318 Ceratophyllum demersum HOM05D001579 ORTHO05D003470 1.4e-45 187.2 134 70.1
AUR62003165 Chenopodium quinoa HOM05D001579 ORTHO05D003470 1.4e-45 187.2 134 70.1
AUR62034498 Chenopodium quinoa HOM05D001579 ORTHO05D003470 1.4e-45 187.2 134 70.1
PGR042G0613 Punica granatum HOM05D001579 ORTHO05D003470 1.4e-45 187.2 150 66.0
AagrBONN_evm.TU.Sc2ySwM_344.2010 Anthoceros agrestis HOM05D001579 ORTHO05D003470 1.8e-45 186.8 134 70.1
A09p57990 Brassica napus HOM05D001579 ORTHO05D003470 1.8e-45 186.8 134 70.9
CiPaw.05G064600 Carya illinoinensis HOM05D001579 ORTHO05D003470 2.4e-45 186.4 134 70.1
Haze_02385 Corylus avellana HOM05D001579 ORTHO05D003470 2.4e-45 186.4 134 70.1
ECA240G1027 Erigeron canadensis HOM05D001579 ORTHO05D003470 2.4e-45 186.4 134 70.1
Lj3g0013700 Lotus japonicus HOM05D001579 ORTHO05D003470 2.4e-45 186.4 134 70.9
Phvul.011G045200 Phaseolus vulgaris HOM05D001579 ORTHO05D003470 2.4e-45 186.4 134 70.9
Pp3c2_16770 Physcomitrium patens HOM05D001579 ORTHO05D003470 2.4e-45 186.4 134 70.1
VMungo1127G1806 Vigna mungo HOM05D001579 ORTHO05D003470 2.4e-45 186.4 134 70.9
Ah.02g117280 Amaranthus hybridus HOM05D001579 ORTHO05D003470 3.1e-45 186.0 134 70.1
Lsat_1_v5_gn_2_67440 Lactuca sativa HOM05D001579 ORTHO05D003470 3.1e-45 186.0 134 70.9
Nitab4.5_0000308g0090 Nicotiana tabacum HOM05D001579 ORTHO05D003470 3.1e-45 186.0 134 70.1
TWI79G0010 Tripterygium wilfordii HOM05D001579 ORTHO05D003470 3.1e-45 186.0 134 71.6
HanXRQChr14g0437911 Helianthus annuus HOM05D001579 ORTHO05D003470 4.1e-45 185.7 134 70.1
HanXRQChr14g0446281 Helianthus annuus HOM05D001579 ORTHO05D003470 4.1e-45 185.7 134 70.1
QL11p043704 Quercus lobata HOM05D001579 ORTHO05D003470 4.1e-45 185.7 134 70.1
Cfa005003 Carpinus fangiana HOM05D001579 ORTHO05D003470 5.4e-45 185.3 134 69.4
AUR62034190 Chenopodium quinoa HOM05D001579 ORTHO05D003470 5.4e-45 185.3 134 69.4
Glyma.11G117800 Glycine max HOM05D001579 ORTHO05D003470 5.4e-45 185.3 134 70.9
Ah.12g056190 Amaranthus hybridus HOM05D001579 ORTHO05D006780 7.0e-45 184.9 133 69.9
SalBow6G0592 Salvia bowleyana HOM05D001579 ORTHO05D003470 7.0e-45 184.9 134 70.1
SalBow6G1678 Salvia bowleyana HOM05D001579 ORTHO05D003470 7.0e-45 184.9 134 70.1
Ca_01102_v3 Cicer arietinum L. HOM05D001579 ORTHO05D003470 9.1e-45 184.5 134 70.1
CsaV3_3G002020 Cucumis sativus L. HOM05D001579 ORTHO05D003470 9.1e-45 184.5 134 68.7
Lj1g0020223 Lotus japonicus HOM05D001579 ORTHO05D003470 9.1e-45 184.5 134 70.1
Lalb_Chr03g0025681 Lupinus albus HOM05D001579 ORTHO05D003470 9.1e-45 184.5 134 70.1
Medtr4g070040 Medicago truncatula HOM05D001579 ORTHO05D003470 9.1e-45 184.5 134 70.1
Psat7g141360 Pisum sativum HOM05D001579 ORTHO05D003470 9.1e-45 184.5 134 70.1
Hund14641 Selenicereus undatus HOM05D001579 ORTHO05D003470 9.1e-45 184.5 134 71.6
SEGI_28257 Sequoiadendron giganteum HOM05D001579 ORTHO05D003470 9.1e-45 184.5 134 70.1
MELO3C013873.2 Cucumis melo HOM05D001579 ORTHO05D003470 1.2e-44 184.1 134 67.9
COL.COLO4_25932 Corchorus olitorius HOM05D001579 ORTHO05D003470 1.6e-44 183.7 149 67.8
unitig_0.g66 Utricularia gibba HOM05D001579 ORTHO05D003470 1.6e-44 183.7 134 70.1
Glyma.17G231300 Glycine max HOM05D001579 ORTHO05D003470 2.0e-44 183.3 134 70.1
Lalb_Chr01g0002541 Lupinus albus HOM05D001579 ORTHO05D003470 2.0e-44 183.3 134 69.4
Mapoly0012s0145 Marchantia polymorpha HOM05D001579 ORTHO05D003470 2.0e-44 183.3 139 67.6
Hund11566 Selenicereus undatus HOM05D001579 ORTHO05D003470 2.7e-44 183.0 134 70.9
Glyma.12G043200 Glycine max HOM05D001579 ORTHO05D003470 3.5e-44 182.6 134 70.1
Carub.0004s0076 Capsella rubella HOM05D001579 ORTHO05D003470 4.5e-44 182.2 147 65.3
FAN16G2055 Fragaria x ananassa HOM05D001579 ORTHO05D003470 5.9e-44 181.8 134 69.4
BraA04t17272Z Brassica rapa HOM05D001579 ORTHO05D003470 7.7e-44 181.4 139 66.9
FAN16G0460 Fragaria x ananassa HOM05D001579 ORTHO05D003470 7.7e-44 181.4 134 69.4
FAN21G0623 Fragaria x ananassa HOM05D001579 ORTHO05D003470 7.7e-44 181.4 134 69.4
Os10g0400800 Oryza sativa ssp. japonica HOM05D001579 ORTHO05D003470 7.7e-44 181.4 134 69.4
Potri.004G155000 Populus trichocarpa HOM05D001579 ORTHO05D003470 7.7e-44 181.4 147 66.0
Sabra04G0102800 Salix brachista HOM05D001579 ORTHO05D003470 7.7e-44 181.4 147 66.0
FvH4_2g08790 Fragaria vesca HOM05D001579 ORTHO05D003470 1.0e-43 181.0 134 69.4
FvH4_3g28200 Fragaria vesca HOM05D001579 ORTHO05D003470 1.0e-43 181.0 134 69.4
FAN11G3917 Fragaria x ananassa HOM05D001579 ORTHO05D003470 1.0e-43 181.0 134 69.4
FAN20G1104 Fragaria x ananassa HOM05D001579 ORTHO05D003470 1.0e-43 181.0 134 69.4
FAN27G2756 Fragaria x ananassa HOM05D001579 ORTHO05D003470 1.0e-43 181.0 134 69.4
Carub.0005s1088 Capsella rubella HOM05D001579 ORTHO05D003470 1.3e-43 180.6 134 70.1
Thhalv10007412m.g Eutrema salsugineum HOM05D001579 ORTHO05D003470 1.3e-43 180.6 134 68.7
Manes.17G101200 Manihot esculenta HOM05D001579 ORTHO05D003470 1.7e-43 180.3 147 64.6
RcHm_v2.0_Chr6g0264251 Rosa chinensis HOM05D001579 ORTHO05D003470 1.7e-43 180.3 134 69.4
TPR.G19411 Trifolium pratense HOM05D001579 ORTHO05D003470 1.7e-43 180.3 134 68.7
Zm00001eb255720 Zea mays HOM05D001579 ORTHO05D003470 1.7e-43 180.3 134 68.7
A04p16340 Brassica napus HOM05D001579 ORTHO05D003470 2.2e-43 179.9 139 66.2
FAN15G0032 Fragaria x ananassa HOM05D001579 ORTHO05D003470 2.2e-43 179.9 134 69.4
arahy.Tifrunner.gnm1.ann1.D5Q7RU Arachis hypogaea HOM05D001579 ORTHO05D003470 2.9e-43 179.5 134 69.4
BcaC02g08772 Brassica carinata HOM05D001579 ORTHO05D003470 2.9e-43 179.5 139 66.2
C04p50830 Brassica napus HOM05D001579 ORTHO05D003470 2.9e-43 179.5 139 66.2
BolC4t26677H Brassica oleracea HOM05D001579 ORTHO05D003470 2.9e-43 179.5 139 66.2
Peaxi162Scf00016g00732 Petunia axillaris HOM05D001579 ORTHO05D003470 2.9e-43 179.5 139 67.6
Potri.009G116100 Populus trichocarpa HOM05D001579 ORTHO05D003470 2.9e-43 179.5 147 65.3
SMO119G0093 Selaginella moellendorffii HOM05D001579 ORTHO05D003470 8.5e-43 177.9 142 65.5
Cre09.g389430 Chlamydomonas reinhardtii HOM05D001579 ORTHO05D003470 1.1e-42 177.6 134 67.9
BcaB06g27782 Brassica carinata HOM05D001579 ORTHO05D003470 2.5e-42 176.4 151 62.3
DCAR_006198 Daucus carota HOM05D001579 ORTHO05D003470 4.2e-42 175.6 185 54.6
PSO447G0328 Papaver somniferum HOM05D001579 ORTHO05D003470 4.2e-42 175.6 134 66.4
PSO478G3633 Papaver somniferum HOM05D001579 ORTHO05D003470 4.2e-42 175.6 134 66.4
BcaB03g12963 Brassica carinata HOM05D001579 ORTHO05D003470 1.2e-41 174.1 135 66.7
CARHR265880 Cardamine hirsuta HOM05D001579 ORTHO05D003470 1.6e-41 173.7 134 67.9
RcHm_v2.0_Chr7g0204471 Rosa chinensis HOM05D001579 ORTHO05D003470 2.1e-41 173.3 133 64.7
FAN24G0111 Fragaria x ananassa HOM05D001579 ORTHO05D003470 4.7e-41 172.2 141 65.2
TPR.G23438 Trifolium pratense HOM05D001579 ORTHO05D003470 2.3e-40 169.9 134 64.9
MCO10G005 Micromonas commoda HOM05D001579 ORTHO05D003470 4.0e-40 169.1 134 63.4
AUR62007985 Chenopodium quinoa HOM05D001579 ORTHO05D003470 8.8e-40 167.9 157 58.6
Aqoxy7G01384 Aquilegia oxysepala HOM05D001579 ORTHO05D003470 5.7e-39 165.2 134 63.4
Duzib132G0542 Durio zibethinus HOM05D001579 ORTHO05D003470 2.2e-38 163.3 100 80.0
PRCOL_00000627 Prasinoderma coloniale HOM05D001579 ORTHO05D003470 2.8e-38 162.9 133 60.2
SGA_v2.0_scaffold32G13167 Striga asiatica HOM05D001579 ORTHO05D003470 1.1e-37 161.0 139 61.2
C08p41200 Brassica napus HOM05D001579 ORTHO05D003470 5.4e-37 158.7 100 77.0
BolC8t51687H Brassica oleracea HOM05D001579 ORTHO05D003470 5.4e-37 158.7 100 77.0
Lj2C359T3 Lonicera japonica HOM05D001579 ORTHO05D003470 1.6e-36 157.1 100 77.0
Lj7C253T7 Lonicera japonica HOM05D001579 ORTHO05D003470 1.6e-36 157.1 100 77.0
BraA09t41189Z Brassica rapa HOM05D001579 ORTHO05D003470 2.7e-36 156.4 100 76.0
SGA_v2.0_scaffold58G20534 Striga asiatica HOM05D001579 ORTHO05D003470 2.7e-36 156.4 100 75.0
ClCG10G001880 Citrullus lanatus HOM05D001579 ORTHO05D003470 4.5e-36 155.6 98 73.5
Haze_27501 Corylus avellana HOM05D001579 ORTHO05D003470 7.7e-36 154.8 135 57.8
SalBow6G2679 Salvia bowleyana HOM05D001579 ORTHO05D003470 1.3e-35 154.1 118 67.8
CARHR112730 Cardamine hirsuta HOM05D001579 ORTHO05D003470 2.3e-35 153.3 100 75.0
CBR_g23301 Chara braunii HOM05D001579 ORTHO05D003470 5.0e-35 152.1 104 72.1
CiPaw.01G010000 Carya illinoinensis HOM05D001579 ORTHO05D003470 2.5e-34 149.8 98 73.5
PSO170G0890 Papaver somniferum HOM05D001579 ORTHO05D003470 2.5e-34 149.8 134 60.4
BcaC08g45384 Brassica carinata HOM05D001579 ORTHO05D003470 1.4e-32 144.1 141 56.7
Cfa025854 Carpinus fangiana HOM05D001579 ORTHO05D003470 2.0e-31 140.2 134 52.2
BcaB03g15109 Brassica carinata HOM05D001579 ORTHO05D003470 1.2e-28 131.0 139 55.4
BcaC08g46255 Brassica carinata HOM05D001579 ORTHO05D003470 7.8e-28 128.3 93 67.7
CiPaw.01G010500 Carya illinoinensis HOM05D001579 ORTHO05D003470 2.9e-27 126.3 64 87.5
CiPaw.01G010800 Carya illinoinensis HOM05D001579 ORTHO05D003470 2.9e-27 126.3 64 87.5
CARHR112710 Cardamine hirsuta HOM05D001579 ORTHO05D003470 5.6e-26 122.1 79 75.9
C06p30160 Brassica napus HOM05D001579 ORTHO05D003470 2.1e-25 120.2 108 58.3
BolC6t38178H Brassica oleracea HOM05D001579 ORTHO05D003470 2.1e-25 120.2 108 58.3
Cc00_g17000 Coffea canephora HOM05D001579 ORTHO05D003470 1.8e-24 117.1 79 70.9
QL11p043604 Quercus lobata HOM05D001579 ORTHO05D003470 1.5e-23 114.0 77 71.4
CSS0030455 Camellia sinensis var. sinensis HOM05D001579 ORTHO05D003470 7.5e-23 111.7 77 71.4
SalBow6G3810 Salvia bowleyana HOM05D001579 ORTHO05D003470 2.2e-22 110.2 75 73.3
Cc02_g25810 Coffea canephora HOM05D001579 ORTHO05D003470 2.5e-10 70.1 57 63.2
AL7G31990 Arabidopsis lyrata HOM05D001579 ORTHO05D003470 4.3e-10 69.3 52 67.3
BcaC08g46254 Brassica carinata HOM05D001579 ORTHO05D003470 4.3e-10 69.3 61 60.7
HanXRQChr03g0085131 Helianthus annuus HOM05D001579 ORTHO05D003470 1.2e-09 67.8 61 60.7
HanXRQChr10g0282631 Helianthus annuus HOM05D001579 ORTHO05D003470 1.2e-09 67.8 61 60.7
RcHm_v2.0_Chr7g0218631 Rosa chinensis HOM05D001579 ORTHO05D003470 6.8e-08 62.0 48 64.6
CAN.G294.17 Capsicum annuum HOM05D001579 ORTHO05D003470 5.8e-07 58.9 98 38.8
HPP92_002579 Vanilla planifolia HOM05D001579 ORTHO05D003470 5.8e-07 58.9 49 59.2


User provided reference genes

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