Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02064 Vaccinium macrocarpon HOM05D006646 ORTHO05D008279 8.8e-143 510.4 275 100.0
CSS0016085 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 1.1e-57 227.6 235 60.0
CSS0027643 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 3.6e-56 222.6 193 65.3
CiPaw.06G130600 Carya illinoinensis HOM05D006646 ORTHO05D008279 4.9e-45 185.7 147 70.1
HanXRQChr05g0139661 Helianthus annuus HOM05D006646 ORTHO05D008279 4.9e-45 185.7 124 79.0
Dinv23471 Davidia involucrata HOM05D006646 ORTHO05D008279 1.4e-44 184.1 206 56.3
Potri.009G122500 Populus trichocarpa HOM05D006646 ORTHO05D008279 1.9e-44 183.7 189 55.6
Lsat_1_v5_gn_4_68441 Lactuca sativa HOM05D006646 ORTHO05D008279 2.5e-44 183.3 153 66.7
QL11p045794 Quercus lobata HOM05D006646 ORTHO05D008279 1.6e-43 180.6 148 68.9
DCAR_022798 Daucus carota HOM05D006646 ORTHO05D008279 2.1e-43 180.3 243 51.9
FAN27G0283 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.7e-43 179.9 182 56.6
Hma1.2p1_0851F.1_g228260 Hydrangea macrophylla HOM05D006646 ORTHO05D008279 2.7e-43 179.9 124 76.6
CAN.G170.87 Capsicum annuum HOM05D006646 ORTHO05D008279 3.5e-43 179.5 160 62.5
MD10G1065400 Malus domestica HOM05D006646 ORTHO05D008279 3.5e-43 179.5 181 57.5
VMungo1127G0939 Vigna mungo HOM05D006646 ORTHO05D008279 3.5e-43 179.5 174 59.2
Sopen01g052420 Solanum pennellii HOM05D006646 ORTHO05D008279 6.0e-43 178.7 164 63.4
Glyma.11G112300 Glycine max HOM05D006646 ORTHO05D008279 7.9e-43 178.3 227 48.9
Oeu008579.1 Olea europaea HOM05D006646 ORTHO05D008279 7.9e-43 178.3 125 76.8
PGSC0003DMG400003128 Solanum tuberosum HOM05D006646 ORTHO05D008279 7.9e-43 178.3 228 53.1
TAR376G0115 Trochodendron aralioides HOM05D006646 ORTHO05D008279 1.3e-42 177.6 119 77.3
Phvul.011G040400 Phaseolus vulgaris HOM05D006646 ORTHO05D008279 3.0e-42 176.4 233 49.8
ECA247G1974 Erigeron canadensis HOM05D006646 ORTHO05D008279 3.9e-42 176.0 131 71.0
Solyc01g110270.3 Solanum lycopersicum HOM05D006646 ORTHO05D008279 3.9e-42 176.0 237 52.3
Prupe.8G087400 Prunus persica HOM05D006646 ORTHO05D008279 6.7e-42 175.3 192 54.7
Ca_20923_v3 Cicer arietinum L. HOM05D006646 ORTHO05D008279 1.1e-41 174.5 206 51.9
arahy.Tifrunner.gnm1.ann1.I36BMJ Arachis hypogaea HOM05D006646 ORTHO05D008279 1.5e-41 174.1 146 63.7
COL.COLO4_26029 Corchorus olitorius HOM05D006646 ORTHO05D008279 3.3e-41 172.9 149 63.1
Eucgr.G01718 Eucalyptus grandis HOM05D006646 ORTHO05D008279 4.3e-41 172.6 243 49.0
FvH4_2g10110 Fragaria vesca HOM05D006646 ORTHO05D008279 4.3e-41 172.6 189 53.4
FAN15G0580 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.3e-41 172.6 189 53.4
Cpa.g.sc150.36 Carica papaya HOM05D006646 ORTHO05D008279 7.4e-41 171.8 125 69.6
Thecc.02G077600 Theobroma cacao HOM05D006646 ORTHO05D008279 9.6e-41 171.4 158 60.8
Cfa005079 Carpinus fangiana HOM05D006646 ORTHO05D008279 1.3e-40 171.0 112 78.6
Migut.B00188 Erythranthe guttata HOM05D006646 ORTHO05D008279 1.3e-40 171.0 200 52.5
Peaxi162Scf00016g00142 Petunia axillaris HOM05D006646 ORTHO05D008279 1.3e-40 171.0 125 72.0
SalBow6G1011 Salvia bowleyana HOM05D006646 ORTHO05D008279 1.6e-40 170.6 237 49.4
TPR.G16241 Trifolium pratense HOM05D006646 ORTHO05D008279 1.6e-40 170.6 185 54.6
Cc02_g17030 Coffea canephora HOM05D006646 ORTHO05D008279 2.1e-40 170.2 226 49.6
Manes.04G084900 Manihot esculenta HOM05D006646 ORTHO05D008279 2.1e-40 170.2 191 53.4
FAN24G1192 Fragaria x ananassa HOM05D006646 ORTHO05D008279 3.7e-40 169.5 189 52.9
PSO541G0619 Papaver somniferum HOM05D006646 ORTHO05D008279 4.8e-40 169.1 155 61.9
Duzib132G1122 Durio zibethinus HOM05D006646 ORTHO05D008279 6.3e-40 168.7 219 48.4
Lj3g0021213 Lotus japonicus HOM05D006646 ORTHO05D008279 1.1e-39 167.9 165 55.8
Psat0s2721g0040 Pisum sativum HOM05D006646 ORTHO05D008279 1.1e-39 167.9 228 48.7
SGA_v2.0_scaffold58G20474 Striga asiatica HOM05D006646 ORTHO05D008279 1.4e-39 167.5 194 49.5
TWI75G0841 Tripterygium wilfordii HOM05D006646 ORTHO05D008279 1.4e-39 167.5 156 59.0
Lalb_Chr01g0002221 Lupinus albus HOM05D006646 ORTHO05D008279 1.8e-39 167.2 133 66.9
Hund06269 Selenicereus undatus HOM05D006646 ORTHO05D008279 1.8e-39 167.2 177 56.5
arahy.Tifrunner.gnm1.ann1.RI2JL3 Arachis hypogaea HOM05D006646 ORTHO05D008279 2.4e-39 166.8 136 66.2
PGR042G2699 Punica granatum HOM05D006646 ORTHO05D008279 2.4e-39 166.8 151 61.6
RcHm_v2.0_Chr6g0267071 Rosa chinensis HOM05D006646 ORTHO05D008279 2.4e-39 166.8 160 58.1
Aqoxy6G02397 Aquilegia oxysepala HOM05D006646 ORTHO05D008279 3.1e-39 166.4 125 68.8
Atru.chr5.3116 Acer truncatum HOM05D006646 ORTHO05D008279 5.3e-39 165.6 119 70.6
Ciclev10028627m.g Citrus clementina HOM05D006646 ORTHO05D008279 6.9e-39 165.2 117 71.8
Gohir.A12G041400 Gossypium hirsutum HOM05D006646 ORTHO05D008279 6.9e-39 165.2 143 61.5
AUR62016804 Chenopodium quinoa HOM05D006646 ORTHO05D008279 1.2e-38 164.5 171 56.7
MBI05_g30638_MAGBIO Magnolia biondii HOM05D006646 ORTHO05D008279 1.5e-38 164.1 127 68.5
MSTRG.16840 Avicennia marina HOM05D006646 ORTHO05D008279 2.0e-38 163.7 122 71.3
GSVIVG01024200001 Vitis vinifera HOM05D006646 ORTHO05D008279 2.6e-38 163.3 114 73.7
CDE02G3850 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 4.5e-38 162.5 185 53.0
CDE09G0634 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 5.9e-38 162.2 175 55.4
Gohir.D12G030800 Gossypium hirsutum HOM05D006646 ORTHO05D008279 1.0e-37 161.4 145 60.7
Gorai.008G031700 Gossypium raimondii HOM05D006646 ORTHO05D008279 1.3e-37 161.0 143 60.8
Nn6g32216 Nelumbo nucifera HOM05D006646 ORTHO05D008279 1.3e-37 161.0 180 53.3
Nitab4.5_0010034g0020 Nicotiana tabacum HOM05D006646 ORTHO05D008279 1.3e-37 161.0 245 49.4
Medtr4g071330 Medicago truncatula HOM05D006646 ORTHO05D008279 1.7e-37 160.6 134 61.2
Sc18g0005310 Simmondsia chinensis HOM05D006646 ORTHO05D008279 2.9e-37 159.8 178 53.9
ClCG02G004640 Citrullus lanatus HOM05D006646 ORTHO05D008279 5.0e-37 159.1 145 62.8
Sed0000071 Sechium edule HOM05D006646 ORTHO05D008279 6.5e-37 158.7 153 58.8
EL10Ac9g21659 Beta vulgaris HOM05D006646 ORTHO05D008279 8.4e-37 158.3 114 71.9
MELO3C013428.2 Cucumis melo HOM05D006646 ORTHO05D008279 8.4e-37 158.3 137 61.3
THA.LOC104807761 Tarenaya hassleriana HOM05D006646 ORTHO05D008279 1.4e-36 157.5 109 70.6
CsaV3_7G000290 Cucumis sativus L. HOM05D006646 ORTHO05D008279 1.9e-36 157.1 127 65.4
unitig_32.g11060 Utricularia gibba HOM05D006646 ORTHO05D008279 2.5e-36 156.8 179 55.3
Haze_02302 Corylus avellana HOM05D006646 ORTHO05D008279 4.2e-36 156.0 190 53.7
Sed0001649 Sechium edule HOM05D006646 ORTHO05D008279 2.1e-35 153.7 228 45.6
ATR0661G343 Amborella trichopoda HOM05D006646 ORTHO05D008279 2.7e-35 153.3 111 71.2
Sp7g36790 Schrenkiella parvula HOM05D006646 ORTHO05D008279 3.0e-34 149.8 156 56.4
AL4G10520 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 5.1e-34 149.1 221 46.6
Aa31LG6G16210 Aethionema arabicum HOM05D006646 ORTHO05D008279 1.1e-33 147.9 154 55.2
Carub.0004s0039 Capsella rubella HOM05D006646 ORTHO05D008279 3.3e-33 146.4 205 47.8
Thhalv10025960m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 7.4e-33 145.2 245 45.3
CARHR247710 Cardamine hirsuta HOM05D006646 ORTHO05D008279 9.7e-33 144.8 256 43.8
BcaNung01943 Brassica carinata HOM05D006646 ORTHO05D008279 1.6e-32 144.1 113 65.5
C07p63380 Brassica napus HOM05D006646 ORTHO05D008279 1.6e-32 144.1 113 65.5
Carub.0007s0091 Capsella rubella HOM05D006646 ORTHO05D008279 1.6e-32 144.1 167 52.7
CARHR112230 Cardamine hirsuta HOM05D006646 ORTHO05D008279 1.6e-32 144.1 209 47.8
AT4G39040 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 2.2e-32 143.7 133 60.9
BraA06t27738Z Brassica rapa HOM05D006646 ORTHO05D008279 2.2e-32 143.7 154 53.9
HPP92_007403 Vanilla planifolia HOM05D006646 ORTHO05D008279 2.2e-32 143.7 189 48.7
AL7G10980 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 3.7e-32 142.9 157 54.1
A06p48720 Brassica napus HOM05D006646 ORTHO05D008279 1.4e-31 141.0 193 45.6
AT2G21350 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 1.8e-31 140.6 97 73.2
BolC7t46749H Brassica oleracea HOM05D006646 ORTHO05D008279 1.8e-31 140.6 239 44.4
A04p16110 Brassica napus HOM05D006646 ORTHO05D008279 2.4e-31 140.2 134 59.0
BraA04t17251Z Brassica rapa HOM05D006646 ORTHO05D008279 2.4e-31 140.2 134 59.0
BcaC02g08796 Brassica carinata HOM05D006646 ORTHO05D008279 3.1e-31 139.8 136 57.4
C04p50570 Brassica napus HOM05D006646 ORTHO05D008279 3.1e-31 139.8 136 57.4
BolC4t26655H Brassica oleracea HOM05D006646 ORTHO05D008279 4.1e-31 139.4 136 57.4
Os10g0512500 Oryza sativa ssp. japonica HOM05D006646 ORTHO05D008279 1.2e-30 137.9 139 56.1
Sp4g00530 Schrenkiella parvula HOM05D006646 ORTHO05D008279 7.7e-30 135.2 98 69.4
Thhalv10000312m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 5.0e-29 132.5 96 70.8
Nitab4.5_0002723g0110 Nicotiana tabacum HOM05D006646 ORTHO05D008279 7.4e-25 118.6 211 44.5
AUR62010412 Chenopodium quinoa HOM05D006646 ORTHO05D008279 4.1e-23 112.8 113 58.4
Mapoly0113s0060 Marchantia polymorpha HOM05D006646 ORTHO05D008279 5.9e-22 109.0 151 41.7
Pp3c1_22260 Physcomitrium patens HOM05D006646 ORTHO05D008279 1.4e-18 97.8 123 44.7
FAN09G3166 Fragaria x ananassa HOM05D006646 ORTHO05D008279 3.0e-18 96.7 70 67.1
FAN24G0918 Fragaria x ananassa HOM05D001806 ORTHO05D002069 3.0e-18 96.7 69 68.1
CBR_g11057 Chara braunii HOM05D006646 ORTHO05D008279 3.9e-18 96.3 96 49.0
FAN05G0067 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.5e-17 94.4 58 79.3
FAN05G1359 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.5e-17 94.4 58 79.3
FAN19G2814 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.0e-17 94.0 68 67.6
AagrBONN_evm.TU.Sc2ySwM_344.4239 Anthoceros agrestis HOM05D006646 ORTHO05D008279 3.3e-17 93.2 111 45.9
FAN18G1095 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.4e-17 92.8 59 76.3
CANSAT11G0453 Cannabis sativa HOM05D006646 ORTHO05D008279 3.7e-16 89.7 61 73.8
arahy.Tifrunner.gnm1.ann1.1G50NI Arachis hypogaea HOM05D006646 ORTHO05D008279 5.3e-15 85.9 54 75.9
Lj5P190T58 Lonicera japonica HOM05D006646 ORTHO05D008279 2.0e-14 84.0 69 65.2
BcaNung01286 Brassica carinata HOM05D006646 ORTHO05D008279 5.9e-14 82.4 88 56.8
Zm00001eb220380 Zea mays HOM05D006646 ORTHO05D008279 1.4e-10 71.2 51 70.6
SMO367G1025 Selaginella moellendorffii HOM05D006646 ORTHO05D008279 2.3e-10 70.5 82 45.1
Haze_22123 Corylus avellana HOM05D006646 ORTHO05D008279 8.8e-10 68.6 48 72.9


User provided reference genes

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