Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro02004 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 1.8e-96 356.3 228 100.0
Rhsim11G0160200 Rhododendron simsii HOM05D006149 ORTHO05D007341 2.3e-48 196.4 230 60.4
Dinv15763 Davidia involucrata HOM05D006149 ORTHO05D007341 8.5e-43 177.9 226 54.9
Dinv42191 Davidia involucrata HOM05D006149 ORTHO05D007341 4.1e-37 159.1 181 54.1
SalBow6G4084 Salvia bowleyana HOM05D006149 ORTHO05D007341 2.1e-33 146.7 185 56.2
MSTRG.16714 Avicennia marina HOM05D006149 ORTHO05D007341 3.0e-32 142.9 185 56.2
QL11p033743 Quercus lobata HOM05D006149 ORTHO05D007341 3.0e-32 142.9 205 53.2
CSS0036049 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 6.8e-32 141.7 177 52.0
Nn4g25119 Nelumbo nucifera HOM05D006149 ORTHO05D007341 6.8e-32 141.7 159 54.7
Lj9A321G81 Lonicera japonica HOM05D006149 ORTHO05D007341 1.5e-31 140.6 156 54.5
VMungo0720G1566 Vigna mungo HOM05D006149 ORTHO05D007341 1.5e-31 140.6 197 53.3
vmacro19450 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 2.0e-31 140.2 182 49.5
Nn1g04703 Nelumbo nucifera HOM05D006149 ORTHO05D007341 1.3e-30 137.5 156 55.8
Lsat_1_v5_gn_9_111221 Lactuca sativa HOM05D006149 ORTHO05D007341 2.9e-30 136.3 156 53.8
MD05G1088900 Malus domestica HOM05D006149 ORTHO05D007341 3.7e-30 136.0 156 54.5
Migut.B00388 Erythranthe guttata HOM05D006149 ORTHO05D007341 8.3e-30 134.8 190 53.7
Sabra16G0188500 Salix brachista HOM05D006149 ORTHO05D007341 1.1e-29 134.4 205 53.7
COL.COLO4_32597 Corchorus olitorius HOM05D006149 ORTHO05D007341 1.8e-29 133.7 202 53.0
Hund06318 Selenicereus undatus HOM05D006149 ORTHO05D007341 2.4e-29 133.3 199 54.3
SGA_v2.0_scaffold225G43080 Striga asiatica HOM05D006149 ORTHO05D007341 2.4e-29 133.3 147 54.4
unitig_22.g5723 Utricularia gibba HOM05D006149 ORTHO05D007341 2.4e-29 133.3 194 53.1
Rhsim05G0088300 Rhododendron simsii HOM05D006149 ORTHO05D007341 5.4e-29 132.1 185 48.1
Nitab4.5_0002815g0010 Nicotiana tabacum HOM05D006149 ORTHO05D007341 7.0e-29 131.7 153 52.9
Actinidia27971 Actinidia chinensis HOM05D006149 ORTHO05D007341 1.2e-28 131.0 151 52.3
HanXRQChr03g0070291 Helianthus annuus HOM05D006149 ORTHO05D007341 1.6e-28 130.6 184 52.7
Nitab4.5_0005392g0090 Nicotiana tabacum HOM05D006149 ORTHO05D007341 1.6e-28 130.6 153 52.3
Cfa004575 Carpinus fangiana HOM05D006149 ORTHO05D007341 2.0e-28 130.2 149 54.4
arahy.Tifrunner.gnm1.ann1.0F7AFP Arachis hypogaea HOM05D006149 ORTHO05D007341 5.9e-28 128.6 192 54.7
Cpa.g.sc76.22 Carica papaya HOM05D006149 ORTHO05D007341 7.8e-28 128.3 167 51.5
ECA240G2462 Erigeron canadensis HOM05D006149 ORTHO05D007341 7.8e-28 128.3 192 52.6
Sabra09G0073900 Salix brachista HOM05D006149 ORTHO05D007341 7.8e-28 128.3 200 53.5
Gohir.A03G186300 Gossypium hirsutum HOM05D006149 ORTHO05D007341 1.3e-27 127.5 154 52.6
Solyc01g107610.4 Solanum lycopersicum HOM05D006149 ORTHO05D007341 1.3e-27 127.5 152 51.3
Sopen01g049800 Solanum pennellii HOM05D006149 ORTHO05D007341 1.3e-27 127.5 152 51.3
PGSC0003DMG400025768 Solanum tuberosum HOM05D006149 ORTHO05D007341 1.3e-27 127.5 152 51.3
arahy.Tifrunner.gnm1.ann1.GUMB1Z Arachis hypogaea HOM05D006149 ORTHO05D007341 1.7e-27 127.1 192 53.6
Glyma.20G128800 Glycine max HOM05D006149 ORTHO05D007341 1.7e-27 127.1 156 51.3
Gohir.D02G207100 Gossypium hirsutum HOM05D006149 ORTHO05D007341 1.5e-26 124.0 152 52.0
Gorai.005G235000 Gossypium raimondii HOM05D006149 ORTHO05D007341 1.5e-26 124.0 152 52.0
Ca_11076_v3 Cicer arietinum L. HOM05D006149 ORTHO05D007341 1.9e-26 123.6 154 50.0
CAN.G1231.7 Capsicum annuum HOM05D006149 ORTHO05D007341 3.3e-26 122.9 148 50.7
MELO3C019546.2 Cucumis melo HOM05D006149 ORTHO05D007341 3.3e-26 122.9 146 53.4
Oeu017469.1 Olea europaea HOM05D006149 ORTHO05D007341 3.3e-26 122.9 153 51.0
Sc08g0001390 Simmondsia chinensis HOM05D006149 ORTHO05D007341 3.3e-26 122.9 145 53.1
THA.LOC104807242 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 3.3e-26 122.9 149 50.3
TWI34G0529 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 3.3e-26 122.9 148 54.1
AUR62039082 Chenopodium quinoa HOM05D006149 ORTHO05D007341 4.3e-26 122.5 199 42.7
Phvul.007G040000 Phaseolus vulgaris HOM05D006149 ORTHO05D007341 4.3e-26 122.5 156 50.0
Thecc.02G107700 Theobroma cacao HOM05D006149 ORTHO05D007341 4.3e-26 122.5 159 49.7
CsaV3_3G018210 Cucumis sativus L. HOM05D006149 ORTHO05D007341 7.3e-26 121.7 146 52.7
Medtr1g107435 Medicago truncatula HOM05D006149 ORTHO05D007341 7.3e-26 121.7 146 52.1
ATR0618G054 Amborella trichopoda HOM05D006149 ORTHO05D007341 1.2e-25 120.9 156 50.0
Lj5g0003815 Lotus japonicus HOM05D006149 ORTHO05D007341 1.2e-25 120.9 156 50.0
TWI32G0763 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 1.6e-25 120.6 146 52.7
TAR628G0594 Trochodendron aralioides HOM05D006149 ORTHO05D007341 1.6e-25 120.6 156 48.1
Potri.001G300300 Populus trichocarpa HOM05D006149 ORTHO05D007341 2.1e-25 120.2 154 51.3
Duzib052G0317 Durio zibethinus HOM05D006149 ORTHO05D007341 2.8e-25 119.8 206 51.5
Ciclev10029393m.g Citrus clementina HOM05D006149 ORTHO05D007341 4.7e-25 119.0 143 52.4
Sed0001717 Sechium edule HOM05D006149 ORTHO05D007341 4.7e-25 119.0 146 52.1
CDE02G2507 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 6.1e-25 118.6 156 50.6
CDE02G4185 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 6.1e-25 118.6 156 50.6
Psat6g219120 Pisum sativum HOM05D006149 ORTHO05D007341 8.0e-25 118.2 152 48.7
PGR142G0815 Punica granatum HOM05D006149 ORTHO05D007341 8.0e-25 118.2 154 48.7
Manes.10G076500 Manihot esculenta HOM05D006149 ORTHO05D007341 1.4e-24 117.5 143 52.4
CANSAT25G3711 Cannabis sativa HOM05D006149 ORTHO05D007341 1.8e-24 117.1 185 50.3
Thhalv10022867m.g Eutrema salsugineum HOM05D006149 ORTHO05D007341 2.3e-24 116.7 189 49.7
RcHm_v2.0_Chr6g0255351 Rosa chinensis HOM05D006149 ORTHO05D007341 2.3e-24 116.7 141 52.5
MD05G1089500 Malus domestica HOM05D006149 ORTHO05D007341 3.1e-24 116.3 144 50.0
FAN20G0990 Fragaria x ananassa HOM05D006149 ORTHO05D007341 5.2e-24 115.5 141 51.8
Os09g0104300 Oryza sativa ssp. japonica HOM05D006149 ORTHO05D007341 1.5e-23 114.0 170 46.5
AL3G46990 Arabidopsis lyrata HOM05D006149 ORTHO05D007341 2.0e-23 113.6 148 48.6
BcaC06g36046 Brassica carinata HOM05D006149 ORTHO05D007341 2.0e-23 113.6 147 49.0
BcaC04g22139 Brassica carinata HOM05D006149 ORTHO05D007341 2.6e-23 113.2 147 48.3
C07p08530 Brassica napus HOM05D006149 ORTHO05D007341 2.6e-23 113.2 147 48.3
BolC7t41265H Brassica oleracea HOM05D006149 ORTHO05D007341 2.6e-23 113.2 147 48.3
ClCG05G010280 Citrullus lanatus HOM05D006149 ORTHO05D007341 3.4e-23 112.8 140 51.4
HPP92_004777 Vanilla planifolia HOM05D006149 ORTHO05D007341 4.4e-23 112.5 154 49.4
Glyma.10G262200 Glycine max HOM05D006149 ORTHO05D007341 5.8e-23 112.1 149 47.0
CDE04G1609 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 9.8e-23 111.3 180 51.1
BcaB03g16271 Brassica carinata HOM05D006149 ORTHO05D007341 1.3e-22 110.9 147 46.9
Peaxi162Scf00016g02334 Petunia axillaris HOM05D006149 ORTHO05D007341 1.3e-22 110.9 173 47.4
FvH4_2g05220 Fragaria vesca HOM05D006149 ORTHO05D007341 2.9e-22 109.8 136 51.5
FAN15G1894 Fragaria x ananassa HOM05D006149 ORTHO05D007341 2.9e-22 109.8 136 51.5
FAN24G0478 Fragaria x ananassa HOM05D000289 ORTHO05D007341 2.9e-22 109.8 136 51.5
FAN27G1351 Fragaria x ananassa HOM05D000289 ORTHO05D007341 2.9e-22 109.8 136 51.5
Sp3g28510 Schrenkiella parvula HOM05D006149 ORTHO05D007341 2.9e-22 109.8 193 44.6
PSO675G5876 Papaver somniferum HOM05D006149 ORTHO05D007341 3.7e-22 109.4 156 46.2
SHI05287 Sapria himalayana HOM05D006149 ORTHO05D007341 3.7e-22 109.4 146 47.9
THA.LOC104819555 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 3.7e-22 109.4 131 52.7
CSS0028016 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 4.9e-22 109.0 91 65.9
CiPaw.05G011400 Carya illinoinensis HOM05D006149 ORTHO05D007341 1.9e-21 107.1 135 48.9
PSO541G1364 Papaver somniferum HOM05D006149 ORTHO05D007341 1.9e-21 107.1 154 46.1
Sed0008540 Sechium edule HOM05D006149 ORTHO05D007341 3.2e-21 106.3 141 48.9
AT2G15270 Arabidopsis thaliana HOM05D006149 ORTHO05D007341 7.0e-21 105.1 141 48.2
CARHR105640 Cardamine hirsuta HOM05D006149 ORTHO05D007341 7.0e-21 105.1 142 47.9
BcaB08g34585 Brassica carinata HOM05D006149 ORTHO05D007341 1.6e-20 104.0 180 46.7
A07p05350 Brassica napus HOM05D006149 ORTHO05D007341 1.6e-20 104.0 141 46.8
BraA07t28328Z Brassica rapa HOM05D006149 ORTHO05D007341 1.6e-20 104.0 141 46.8
Carub.0003s2910 Capsella rubella HOM05D006149 ORTHO05D007341 2.0e-20 103.6 140 47.1
Eucgr.E02957 Eucalyptus grandis HOM05D006149 ORTHO05D007341 2.0e-20 103.6 143 46.9
Pp3c2_21780 Physcomitrium patens HOM05D006149 ORTHO05D007341 2.0e-20 103.6 200 42.0
Haze_10168 Corylus avellana HOM05D006149 ORTHO05D007341 2.7e-20 103.2 222 37.4
Aqoxy3G02908 Aquilegia oxysepala HOM05D006149 ORTHO05D007341 3.5e-20 102.8 139 48.9
Actinidia05494 Actinidia chinensis HOM05D006149 ORTHO05D007341 4.6e-20 102.4 64 76.6
Aa31LG8G13110 Aethionema arabicum HOM05D006149 ORTHO05D007341 4.6e-20 102.4 143 45.5
Zm00001eb393310 Zea mays HOM05D006149 ORTHO05D007341 4.6e-20 102.4 160 46.2
Lalb_Chr21g0308351 Lupinus albus HOM05D006149 ORTHO05D007341 7.8e-20 101.7 139 47.5
AagrBONN_evm.TU.Sc2ySwM_228.2976 Anthoceros agrestis HOM05D006149 ORTHO05D007341 1.0e-19 101.3 132 47.7
Prupe.8G134800 Prunus persica HOM05D006149 ORTHO05D007341 1.0e-19 101.3 137 46.7
SEGI_00829 Sequoiadendron giganteum HOM05D006149 ORTHO05D007341 1.0e-19 101.3 141 47.5
DCAR_001643 Daucus carota HOM05D006149 ORTHO05D007341 3.0e-19 99.8 133 46.6
Zm00001eb020500 Zea mays HOM05D006149 ORTHO05D007341 3.0e-19 99.8 125 50.4
SMO364G0740 Selaginella moellendorffii HOM05D006149 ORTHO05D007341 6.6e-19 98.6 131 47.3
HanXRQChr02g0033021 Helianthus annuus HOM05D006149 ORTHO05D007341 1.1e-18 97.8 138 47.1
Duzib248G1531 Durio zibethinus HOM05D006149 ORTHO05D007341 1.9e-18 97.1 163 45.4
CBR_g44544 Chara braunii HOM05D006149 ORTHO05D007341 1.4e-16 90.9 180 40.0
AUR62010304 Chenopodium quinoa HOM05D006149 ORTHO05D007341 2.3e-16 90.1 199 35.2
Pp3c1_15220 Physcomitrium patens HOM05D006149 ORTHO05D007341 3.1e-16 89.7 157 41.4
EL10Ac9g22279 Beta vulgaris HOM05D006149 ORTHO05D007341 4.4e-15 85.9 192 43.8
Ah.01g018230 Amaranthus hybridus HOM05D006149 ORTHO05D007341 9.8e-15 84.7 87 70.1
CANSAT25G0333 Cannabis sativa HOM05D006149 ORTHO05D007341 1.7e-14 84.0 117 46.2
QL11p033903 Quercus lobata HOM05D006149 ORTHO05D007341 1.7e-14 84.0 87 72.4
TAR376G0787 Trochodendron aralioides HOM05D006149 ORTHO05D007341 8.3e-14 81.6 66 65.2
Mapoly0056s0071 Marchantia polymorpha HOM05D006149 ORTHO05D007341 2.4e-13 80.1 150 40.0
PGR042G0697 Punica granatum HOM05D006149 ORTHO05D007341 2.4e-13 80.1 138 39.9
Ciclev10006213m.g Citrus clementina HOM05D006149 ORTHO05D007341 8.6e-11 71.6 129 38.8
SMO197G0096 Selaginella moellendorffii HOM05D024641 ORTHO05D007341 1.6e-09 67.4 37 81.1
MBI12_g27878_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 2.8e-09 66.6 52 67.3
Lsat_1_v5_gn_5_63380 Lactuca sativa HOM05D000113 ORTHO05D012184 4.0e-08 62.8 48 66.7
Cre03.g193150 Chlamydomonas reinhardtii HOM05D006149 ORTHO05D007341 7.6e-07 58.5 132 34.1
Thecc.04G122800 Theobroma cacao HOM05D006149 ORTHO05D007341 7.6e-07 58.5 43 67.4


User provided reference genes

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