Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro01971 Vaccinium macrocarpon HOM05D005520 ORTHO05D006633 3.2e-101 371.7 179 100.0
Lj5A217G90 Lonicera japonica HOM05D005520 ORTHO05D006633 2.1e-44 183.0 138 65.2
CSS0014981 Camellia sinensis var. sinensis HOM05D005520 ORTHO05D006633 1.4e-43 180.3 127 68.5
Rhsim11G0154200 Rhododendron simsii HOM05D005520 ORTHO05D006633 1.1e-42 177.2 127 67.7
arahy.Tifrunner.gnm1.ann1.DF92AY Arachis hypogaea HOM05D005520 ORTHO05D006633 7.4e-42 174.5 128 64.8
Cfa004647 Carpinus fangiana HOM05D005520 ORTHO05D006633 2.4e-40 169.5 127 65.4
Haze_10245 Corylus avellana HOM05D005520 ORTHO05D006633 2.4e-40 169.5 127 64.6
FAN20G2059 Fragaria x ananassa HOM05D005520 ORTHO05D006633 2.4e-40 169.5 127 63.8
GSVIVG01037859001 Vitis vinifera HOM05D005520 ORTHO05D006633 2.4e-40 169.5 127 66.1
Dinv15795 Davidia involucrata HOM05D005520 ORTHO05D006633 3.1e-40 169.1 127 65.4
Lalb_Chr24g0402091 Lupinus albus HOM05D005520 ORTHO05D006633 3.1e-40 169.1 128 64.1
COL.COLO4_32538 Corchorus olitorius HOM05D005520 ORTHO05D006633 4.1e-40 168.7 125 66.4
Medtr1g050465 Medicago truncatula HOM05D005520 ORTHO05D006633 4.1e-40 168.7 128 63.3
Actinidia34369 Actinidia chinensis HOM05D005520 ORTHO05D006633 5.3e-40 168.3 126 65.9
CiPaw.06G167100 Carya illinoinensis HOM05D005520 ORTHO05D006633 5.3e-40 168.3 127 64.6
Medtr8g045480 Medicago truncatula HOM05D005520 ORTHO05D006633 5.3e-40 168.3 128 63.3
Dinv42222 Davidia involucrata HOM05D005520 ORTHO05D006633 9.1e-40 167.5 127 64.6
Lj3g0017538 Lotus japonicus HOM05D005520 ORTHO05D006633 1.5e-39 166.8 128 64.1
RcHm_v2.0_Chr6g0253041 Rosa chinensis HOM05D005520 ORTHO05D006633 1.5e-39 166.8 127 63.8
Rhsim05G0090000 Rhododendron simsii HOM05D005520 ORTHO05D006633 2.0e-39 166.4 127 63.0
EL10Ac8g19365 Beta vulgaris HOM05D005520 ORTHO05D006633 2.6e-39 166.0 127 63.8
Potri.009G090200 Populus trichocarpa HOM05D005520 ORTHO05D006633 2.6e-39 166.0 127 63.8
TPR.G18583 Trifolium pratense HOM05D005520 ORTHO05D006633 2.6e-39 166.0 128 62.5
Psat4g180760 Pisum sativum HOM05D005520 ORTHO05D006633 4.5e-39 165.2 128 61.7
Peaxi162Scf00429g00622 Petunia axillaris HOM05D005520 ORTHO05D006633 5.9e-39 164.9 127 65.4
TAR625G0105 Trochodendron aralioides HOM05D000641 ORTHO05D006633 5.9e-39 164.9 129 62.0
MSTRG.16689 Avicennia marina HOM05D005520 ORTHO05D006633 7.7e-39 164.5 127 63.0
Gohir.D04G160500 Gossypium hirsutum HOM05D005520 ORTHO05D006633 7.7e-39 164.5 129 63.6
Gorai.012G148200 Gossypium raimondii HOM05D005520 ORTHO05D006633 7.7e-39 164.5 129 63.6
arahy.Tifrunner.gnm1.ann1.ZQ2RMB Arachis hypogaea HOM05D005520 ORTHO05D006633 1.0e-38 164.1 128 61.7
Gohir.A04G118800 Gossypium hirsutum HOM05D005520 ORTHO05D006633 1.0e-38 164.1 129 62.8
PGR042G2710 Punica granatum HOM05D005520 ORTHO05D006633 1.0e-38 164.1 127 63.0
TPR.G14598 Trifolium pratense HOM05D005520 ORTHO05D006633 1.0e-38 164.1 128 61.7
Phvul.003G276100 Phaseolus vulgaris HOM05D005520 ORTHO05D006633 1.3e-38 163.7 128 60.9
TWI14G1052 Tripterygium wilfordii HOM05D005520 ORTHO05D006633 1.3e-38 163.7 125 64.0
Ciclev10029310m.g Citrus clementina HOM05D005520 ORTHO05D006633 1.7e-38 163.3 125 64.0
Duzib052G0352 Durio zibethinus HOM05D005520 ORTHO05D006633 1.7e-38 163.3 125 64.8
MD10G1103100 Malus domestica HOM05D005520 ORTHO05D006633 1.7e-38 163.3 126 61.9
Sabra09G0069800 Salix brachista HOM05D005520 ORTHO05D006633 1.7e-38 163.3 127 61.4
MD05G1097000 Malus domestica HOM05D005520 ORTHO05D006633 2.2e-38 162.9 125 62.4
PGSC0003DMG400002983 Solanum tuberosum HOM05D005520 ORTHO05D006633 3.8e-38 162.2 125 64.0
CAN.G689.10 Capsicum annuum HOM05D005520 ORTHO05D006633 5.0e-38 161.8 125 64.0
Manes.10G081300 Manihot esculenta HOM05D005520 ORTHO05D006633 5.0e-38 161.8 125 64.0
Sc18g0003610 Simmondsia chinensis HOM05D005520 ORTHO05D006633 5.0e-38 161.8 130 64.6
Nitab4.5_0000158g0130 Nicotiana tabacum HOM05D005520 ORTHO05D006633 6.5e-38 161.4 127 63.0
Prupe.8G141400 Prunus persica HOM05D005520 ORTHO05D006633 6.5e-38 161.4 127 60.6
SalBow6G1186 Salvia bowleyana HOM05D005520 ORTHO05D006633 6.5e-38 161.4 128 61.7
SalBow6G6323 Salvia bowleyana HOM05D005520 ORTHO05D006633 6.5e-38 161.4 128 61.7
Solyc11g071960.2 Solanum lycopersicum HOM05D005520 ORTHO05D006633 8.5e-38 161.0 125 64.0
THA.LOC104825832 Tarenaya hassleriana HOM05D005520 ORTHO05D006633 8.5e-38 161.0 128 60.9
Eucgr.G01264 Eucalyptus grandis HOM05D005520 ORTHO05D006633 1.4e-37 160.2 125 62.4
RcHm_v2.0_Chr6g0253051 Rosa chinensis HOM05D005520 ORTHO05D006633 1.9e-37 159.8 124 62.9
Gohir.D13G044800 Gossypium hirsutum HOM05D005520 ORTHO05D006633 2.5e-37 159.5 125 63.2
Gorai.013G049600 Gossypium raimondii HOM05D005520 ORTHO05D006633 2.5e-37 159.5 125 63.2
Lj4g0000264 Lotus japonicus HOM05D005520 ORTHO05D006633 2.5e-37 159.5 128 60.9
Psat7g087120 Pisum sativum HOM05D005520 ORTHO05D006633 2.5e-37 159.5 113 67.3
PSO675G3202 Papaver somniferum HOM05D005520 ORTHO05D006633 4.2e-37 158.7 129 59.7
Sopen11g029630 Solanum pennellii HOM05D005520 ORTHO05D006633 4.2e-37 158.7 125 63.2
Cpa.g.sc106.74 Carica papaya HOM05D005520 ORTHO05D006633 7.2e-37 157.9 128 60.2
Sp1g36760 Schrenkiella parvula HOM05D005520 ORTHO05D006633 7.2e-37 157.9 128 59.4
SGA_v2.0_scaffold225G43026 Striga asiatica HOM05D005520 ORTHO05D006633 9.4e-37 157.5 125 60.8
AL1G57420 Arabidopsis lyrata HOM05D005520 ORTHO05D006633 1.2e-36 157.1 128 58.6
Thhalv10011740m.g Eutrema salsugineum HOM05D005520 ORTHO05D006633 1.2e-36 157.1 128 59.4
PSO541G2579 Papaver somniferum HOM05D005520 ORTHO05D006633 1.6e-36 156.8 127 59.8
VMungo0251G2197 Vigna mungo HOM05D005520 ORTHO05D006633 2.1e-36 156.4 125 60.8
CARHR039940 Cardamine hirsuta HOM05D005520 ORTHO05D006633 2.7e-36 156.0 128 57.8
Migut.F01600 Erythranthe guttata HOM05D005520 ORTHO05D006633 2.7e-36 156.0 127 58.3
C03p89340 Brassica napus HOM05D005520 ORTHO05D006633 3.6e-36 155.6 128 58.6
BolC3t21249H Brassica oleracea HOM05D005520 ORTHO05D006633 3.6e-36 155.6 128 58.6
CDE04G3180 Ceratophyllum demersum HOM05D005520 ORTHO05D006633 3.6e-36 155.6 132 56.8
Carub.0001s3909 Capsella rubella HOM05D005520 ORTHO05D006633 4.7e-36 155.2 125 59.2
Migut.B00429 Erythranthe guttata HOM05D005520 ORTHO05D009373 4.7e-36 155.2 112 64.3
HPP92_023672 Vanilla planifolia HOM05D005520 ORTHO05D006633 4.7e-36 155.2 129 58.9
HPP92_023689 Vanilla planifolia HOM05D005520 ORTHO05D006633 4.7e-36 155.2 129 58.9
A08p03510 Brassica napus HOM05D005520 ORTHO05D006633 6.1e-36 154.8 128 58.6
BraA08t32384Z Brassica rapa HOM05D005520 ORTHO05D006633 6.1e-36 154.8 128 58.6
ECA240G0181 Erigeron canadensis HOM05D005520 ORTHO05D006633 7.9e-36 154.5 121 62.8
HanXRQChr03g0069991 Helianthus annuus HOM05D005520 ORTHO05D006633 7.9e-36 154.5 125 60.8
AT1G49880 Arabidopsis thaliana HOM05D005520 ORTHO05D006633 1.0e-35 154.1 112 65.2
CANSAT25G2379 Cannabis sativa HOM05D005520 ORTHO05D006633 1.8e-35 153.3 125 60.0
ClCG10G010520 Citrullus lanatus HOM05D005520 ORTHO05D006633 1.8e-35 153.3 125 61.6
unitig_37.g12800 Utricularia gibba HOM05D005520 ORTHO05D006633 1.8e-35 153.3 125 59.2
Nitab4.5_0008364g0030 Nicotiana tabacum HOM05D005520 ORTHO05D006633 2.3e-35 152.9 108 69.4
DCAR_021961 Daucus carota HOM05D005520 ORTHO05D006633 3.0e-35 152.5 123 61.0
Lsat_1_v5_gn_9_112480 Lactuca sativa HOM05D005520 ORTHO05D006633 6.7e-35 151.4 121 60.3
CDE07G0521 Ceratophyllum demersum HOM05D005520 ORTHO05D006633 9.7e-34 147.5 126 56.3
Sed0007262 Sechium edule HOM05D005520 ORTHO05D006633 9.7e-34 147.5 134 55.2
Migut.B00427 Erythranthe guttata HOM05D005520 ORTHO05D006633 1.3e-33 147.1 121 58.7
Zm00001eb007440 Zea mays HOM05D005520 ORTHO05D006633 1.3e-33 147.1 121 57.0
Psat6g139520 Pisum sativum HOM05D005520 ORTHO05D006633 1.7e-33 146.7 110 63.6
Aa31LG10G4210 Aethionema arabicum HOM05D001821 ORTHO05D006633 2.4e-32 142.9 156 48.7
QL11p031741 Quercus lobata HOM05D005520 ORTHO05D006633 2.6e-31 139.4 196 42.3
SMO172G0176 Selaginella moellendorffii HOM05D005520 ORTHO05D006633 2.6e-31 139.4 121 54.5
Pp3c2_36820 Physcomitrium patens HOM05D005520 ORTHO05D006633 6.5e-30 134.8 105 61.0
SEGI_34662 Sequoiadendron giganteum HOM05D005520 ORTHO05D006633 6.5e-30 134.8 129 50.4
Cc02_g19680 Coffea canephora HOM05D005520 ORTHO05D006633 8.5e-30 134.4 178 44.4
RhsimUnG0125400 Rhododendron simsii HOM05D005520 ORTHO05D006633 1.5e-29 133.7 127 55.1
RcHm_v2.0_Chr6g0253221 Rosa chinensis HOM05D005520 ORTHO05D006633 5.5e-29 131.7 126 55.6
BcaB04g17288 Brassica carinata HOM05D005520 ORTHO05D006633 4.7e-28 128.6 125 56.8
Mapoly0036s0053 Marchantia polymorpha HOM05D005520 ORTHO05D006633 6.1e-28 128.3 120 51.7
FAN15G3606 Fragaria x ananassa HOM05D005520 ORTHO05D006633 8.0e-28 127.9 127 52.8
FvH4_2g03990 Fragaria vesca HOM05D005520 ORTHO05D006633 1.4e-27 127.1 66 84.8
Ca_24141_v3 Cicer arietinum L. HOM05D005520 ORTHO05D006633 1.8e-27 126.7 112 58.9
Pp3c19_18310 Physcomitrium patens HOM05D005520 ORTHO05D006633 3.0e-27 125.9 120 50.8
AUR62022505 Chenopodium quinoa HOM05D005520 ORTHO05D006633 5.2e-27 125.2 112 58.9
Aqoxy6G02716 Aquilegia oxysepala HOM05D005520 ORTHO05D006633 6.7e-27 124.8 86 68.6
Oeu009678.2 Olea europaea HOM05D005520 ORTHO05D006633 1.1e-26 124.0 157 47.1
FAN24G1644 Fragaria x ananassa HOM05D005520 ORTHO05D006633 3.3e-26 122.5 127 51.2
Thecc.02G114500 Theobroma cacao HOM05D005520 ORTHO05D006633 4.4e-26 122.1 62 87.1
Nn1g07564 Nelumbo nucifera HOM05D005520 ORTHO05D006633 4.8e-25 118.6 149 46.3
Medtr0857s0010 Medicago truncatula HOM05D005520 ORTHO05D006633 2.4e-24 116.3 84 66.7
CBR_g2851 Chara braunii HOM05D005520 ORTHO05D006633 4.1e-24 115.5 120 45.0
Glyma.13G199600 Glycine max HOM05D005520 ORTHO05D006633 7.7e-23 111.3 125 48.0
CBR_g31027 Chara braunii HOM05D005520 ORTHO05D006633 1.3e-22 110.5 122 43.4
Atru.chr5.2403 Acer truncatum HOM05D005520 ORTHO05D006633 2.2e-22 109.8 98 56.1
CBR_g38847 Chara braunii HOM05D005520 ORTHO05D006633 7.2e-21 104.8 101 47.5
Cre03.g173200 Chlamydomonas reinhardtii HOM05D005520 ORTHO05D006633 8.0e-20 101.3 118 40.7
Actinidia27983 Actinidia chinensis HOM05D005520 ORTHO05D006633 1.3e-17 94.0 112 46.4
MCO01G292 Micromonas commoda HOM05D005520 ORTHO05D006633 1.3e-17 94.0 117 40.2
Potri.001G296000 Populus trichocarpa HOM05D005520 ORTHO05D006633 1.3e-17 94.0 131 39.7
Haze_26784 Corylus avellana HOM05D005520 ORTHO05D006633 6.3e-17 91.7 133 33.8
Hund12620 Selenicereus undatus HOM05D005520 ORTHO05D006633 1.6e-15 87.0 49 81.6
Glyma.15G237900 Glycine max HOM05D005520 ORTHO05D006633 2.7e-15 86.3 54 72.2
PRCOL_00001319 Prasinoderma coloniale HOM05D000442 ORTHO05D001718 2.9e-14 82.8 142 35.2
Cre14.g633000 Chlamydomonas reinhardtii HOM05D005520 ORTHO05D006633 6.5e-14 81.6 116 35.3
MCO01G319 Micromonas commoda HOM05D005520 ORTHO05D006633 1.2e-12 77.4 104 38.5
MELO3C017991.2 Cucumis melo HOM05D005520 ORTHO05D006633 2.1e-12 76.6 42 83.3
SHI05087 Sapria himalayana HOM05D005520 ORTHO05D006633 4.7e-12 75.5 40 75.0
Cfa024926 Carpinus fangiana HOM05D000137 ORTHO05D122446 6.1e-12 75.1 104 32.7
CsaV3_4G000440 Cucumis sativus L. HOM05D005520 ORTHO05D006633 6.1e-12 75.1 40 85.0
CSS0022898 Camellia sinensis var. sinensis HOM05D005520 ORTHO05D006633 2.3e-11 73.2 69 53.6
ATR0165G041 Amborella trichopoda HOM05D005520 ORTHO05D006633 4.4e-10 68.9 45 64.4
Os03g0206300 Oryza sativa ssp. japonica HOM05D005520 ORTHO05D006633 1.7e-09 67.0 42 64.3
Aqoxy6G02727 Aquilegia oxysepala HOM05D005520 ORTHO05D006633 1.6e-07 60.5 41 65.9


User provided reference genes

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