Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro01793 Vaccinium macrocarpon HOM05D004322 ORTHO05D005033 1.9e-121 439.1 216 100.0
Actinidia39064 Actinidia chinensis HOM05D004322 ORTHO05D005033 2.7e-86 322.4 217 75.1
Dinv24253 Davidia involucrata HOM05D004322 ORTHO05D005033 6.5e-85 317.8 217 74.2
Hma1.2p1_0557F.1_g178250 Hydrangea macrophylla HOM05D004322 ORTHO05D005033 1.8e-82 309.7 218 73.4
Glyma.08G183900 Glycine max HOM05D004322 ORTHO05D005033 2.3e-82 309.3 217 71.4
GSVIVG01029694001 Vitis vinifera HOM05D004322 ORTHO05D005033 2.0e-81 306.2 217 71.0
ECA240G2745 Erigeron canadensis HOM05D004322 ORTHO05D005033 2.6e-81 305.8 216 69.9
TAR376G0532 Trochodendron aralioides HOM05D004322 ORTHO05D005033 2.6e-81 305.8 217 70.5
HanXRQChr03g0066481 Helianthus annuus HOM05D004322 ORTHO05D005033 7.5e-81 304.3 216 68.5
Nn5g28787 Nelumbo nucifera HOM05D004322 ORTHO05D005033 9.8e-81 303.9 217 70.0
Thecc.03G241900 Theobroma cacao HOM05D004322 ORTHO05D005033 2.2e-80 302.8 217 70.0
COL.COLO4_07504 Corchorus olitorius HOM05D004322 ORTHO05D005033 2.8e-80 302.4 217 68.7
Atru.chr6.1013_Atru.chr6.1014 Acer truncatum HOM05D004322 ORTHO05D005033 3.7e-80 302.0 217 70.5
Glyma.15G048900 Glycine max HOM05D004322 ORTHO05D005033 6.3e-80 301.2 217 69.6
Phvul.006G211500 Phaseolus vulgaris HOM05D004322 ORTHO05D005033 6.3e-80 301.2 217 70.0
arahy.Tifrunner.gnm1.ann1.1NY3A5 Arachis hypogaea HOM05D004322 ORTHO05D005033 1.8e-79 299.7 217 68.2
CANSAT11G1833 Cannabis sativa HOM05D004322 ORTHO05D005033 1.8e-79 299.7 217 68.7
arahy.Tifrunner.gnm1.ann1.H25YH4 Arachis hypogaea HOM05D004322 ORTHO05D005033 4.1e-79 298.5 217 68.2
VMungo0251G0859 Vigna mungo HOM05D004322 ORTHO05D005033 4.1e-79 298.5 217 70.0
Ca_00095_v3 Cicer arietinum L. HOM05D004322 ORTHO05D005033 9.2e-79 297.4 217 68.7
Ca_29934_v3 Cicer arietinum L. HOM05D004322 ORTHO05D005033 9.2e-79 297.4 217 68.7
Lj6g0010196 Lotus japonicus HOM05D004322 ORTHO05D005033 9.2e-79 297.4 217 69.1
Manes.10G133500 Manihot esculenta HOM05D004322 ORTHO05D005033 9.2e-79 297.4 217 68.7
TWI14G0809 Tripterygium wilfordii HOM05D004322 ORTHO05D005033 3.5e-78 295.4 217 69.1
TWI23G0630 Tripterygium wilfordii HOM05D004322 ORTHO05D005033 3.5e-78 295.4 217 68.7
TWI23G1123 Tripterygium wilfordii HOM05D004322 ORTHO05D005033 3.5e-78 295.4 217 68.7
Aqoxy5G02055 Aquilegia oxysepala HOM05D004322 ORTHO05D005033 5.9e-78 294.7 217 67.3
Gohir.D03G167900 Gossypium hirsutum HOM05D004322 ORTHO05D005033 1.3e-77 293.5 217 66.4
Gorai.003G177600 Gossypium raimondii HOM05D004322 ORTHO05D005033 1.3e-77 293.5 217 66.4
Gohir.A03G004600 Gossypium hirsutum HOM05D004322 ORTHO05D005033 2.9e-77 292.4 217 65.9
Sopen01g047110 Solanum pennellii HOM05D004322 ORTHO05D005033 3.8e-77 292.0 241 63.5
CiPaw.05G042000 Carya illinoinensis HOM05D004322 ORTHO05D005033 5.0e-77 291.6 217 68.2
Duzib084G1309 Durio zibethinus HOM05D004322 ORTHO05D005033 6.6e-77 291.2 216 67.1
PGR042G3064 Punica granatum HOM05D004322 ORTHO05D005033 6.6e-77 291.2 216 66.7
FAN08G1384 Fragaria x ananassa HOM05D004322 ORTHO05D005033 8.6e-77 290.8 216 65.3
MD15G1419900 Malus domestica HOM05D004322 ORTHO05D005033 2.5e-76 289.3 217 66.8
Prupe.1G564800 Prunus persica HOM05D004322 ORTHO05D005033 2.5e-76 289.3 217 65.4
FAN18G2629 Fragaria x ananassa HOM05D004322 ORTHO05D005033 3.3e-76 288.9 216 64.4
Duzib205G0368 Durio zibethinus HOM05D004322 ORTHO05D005033 5.6e-76 288.1 217 65.4
RcHm_v2.0_Chr7g0223291 Rosa chinensis HOM05D004322 ORTHO05D005033 9.5e-76 287.3 217 65.0
Solyc01g104600.4 Solanum lycopersicum HOM05D004322 ORTHO05D005033 1.6e-75 286.6 217 66.4
PGSC0003DMG400029776 Solanum tuberosum HOM05D004322 ORTHO05D005033 1.6e-75 286.6 217 66.8
Ciclev10002548m.g Citrus clementina HOM05D004322 ORTHO05D005033 2.1e-75 286.2 218 68.3
Eucgr.I02706 Eucalyptus grandis HOM05D004322 ORTHO05D005033 2.1e-75 286.2 216 66.2
Aqoxy5G01565 Aquilegia oxysepala HOM05D004322 ORTHO05D005033 4.7e-75 285.0 217 65.9
SGA_v2.0_scaffold145G36061 Striga asiatica HOM05D004322 ORTHO05D005033 6.1e-75 284.6 236 61.4
TPR.G19733 Trifolium pratense HOM05D004322 ORTHO05D005033 6.1e-75 284.6 217 65.9
Peaxi162Scf01807g00011 Petunia axillaris HOM05D004322 ORTHO05D005033 8.0e-75 284.3 233 63.1
EL10Ac2g03233 Beta vulgaris HOM05D004322 ORTHO05D005033 1.0e-74 283.9 216 63.0
FvH4_5g29770 Fragaria vesca HOM05D004322 ORTHO05D005033 1.0e-74 283.9 217 64.1
Potri.001G207900 Populus trichocarpa HOM05D004322 ORTHO05D005033 1.8e-74 283.1 218 65.1
CSS0031640 Camellia sinensis var. sinensis HOM05D004322 ORTHO05D005033 4.0e-74 282.0 200 72.0
Medtr2g007840 Medicago truncatula HOM05D004322 ORTHO05D005033 6.8e-74 281.2 217 64.5
PSO063G0058 Papaver somniferum HOM05D004322 ORTHO05D005033 8.9e-74 280.8 216 66.2
PSO782G1933 Papaver somniferum HOM05D004322 ORTHO05D005033 8.9e-74 280.8 216 65.7
MD08G1227500 Malus domestica HOM05D004322 ORTHO05D005033 1.5e-73 280.0 217 63.6
ClCG09G014140 Citrullus lanatus HOM05D004322 ORTHO05D005033 2.0e-73 279.6 217 65.4
BolC4t25750H Brassica oleracea HOM05D004322 ORTHO05D005033 5.7e-73 278.1 219 63.0
FAN04G2215 Fragaria x ananassa HOM05D004322 ORTHO05D005033 5.7e-73 278.1 216 63.4
Sed0005743 Sechium edule HOM05D004322 ORTHO05D005033 5.7e-73 278.1 217 65.4
MSTRG.16544 Avicennia marina HOM05D004322 ORTHO05D005033 7.5e-73 277.7 216 61.6
AUR62018226 Chenopodium quinoa HOM05D004322 ORTHO05D005033 9.8e-73 277.3 216 62.0
FAN13G1883 Fragaria x ananassa HOM05D004322 ORTHO05D005033 1.7e-72 276.6 216 61.6
BolC8t48099H Brassica oleracea HOM05D004322 ORTHO05D005033 2.2e-72 276.2 216 62.0
Sp7g11930 Schrenkiella parvula HOM05D004322 ORTHO05D005033 2.9e-72 275.8 216 61.6
BraA04t16492Z Brassica rapa HOM05D004322 ORTHO05D005033 3.7e-72 275.4 216 61.1
Migut.N01026 Erythranthe guttata HOM05D004322 ORTHO05D005033 3.7e-72 275.4 217 61.8
Thhalv10025920m.g Eutrema salsugineum HOM05D004322 ORTHO05D005033 3.7e-72 275.4 217 62.2
SalBow6G5232 Salvia bowleyana HOM05D004322 ORTHO05D005033 6.4e-72 274.6 237 57.8
BcaC02g09358 Brassica carinata HOM05D004322 ORTHO05D005033 8.3e-72 274.2 216 61.6
C04p41720 Brassica napus HOM05D004322 ORTHO05D005033 8.3e-72 274.2 216 61.6
BraA08t33032Z Brassica rapa HOM05D004322 ORTHO05D005033 8.3e-72 274.2 216 61.1
Carub.0007s2831 Capsella rubella HOM05D004322 ORTHO05D005033 1.1e-71 273.9 217 63.1
SalBow6G0151 Salvia bowleyana HOM05D004322 ORTHO05D005033 1.8e-71 273.1 234 58.1
BcaC07g37720 Brassica carinata HOM05D004322 ORTHO05D005033 2.4e-71 272.7 216 60.6
CsaV3_6G037290 Cucumis sativus L. HOM05D004322 ORTHO05D005033 2.4e-71 272.7 217 63.1
BcaB04g18113 Brassica carinata HOM05D004322 ORTHO05D005033 3.2e-71 272.3 216 60.6
Aa31LG9G3260 Aethionema arabicum HOM05D004322 ORTHO05D005033 7.0e-71 271.2 217 61.8
Ah.11g045370 Amaranthus hybridus HOM05D004322 ORTHO05D005033 7.0e-71 271.2 216 59.3
AUR62037741 Chenopodium quinoa HOM05D004322 ORTHO05D005033 7.0e-71 271.2 216 61.1
Hund13069 Selenicereus undatus HOM05D004322 ORTHO05D005033 9.2e-71 270.8 253 57.3
A04p08040 Brassica napus HOM05D004322 ORTHO05D005033 1.6e-70 270.0 216 61.1
BcaB02g08633 Brassica carinata HOM05D004322 ORTHO05D005033 2.0e-70 269.6 216 60.6
MELO3C014386.2 Cucumis melo HOM05D004322 ORTHO05D005033 2.0e-70 269.6 217 63.6
ATR0584G136 Amborella trichopoda HOM05D004322 ORTHO05D005033 2.7e-70 269.2 216 58.8
AL7G42300 Arabidopsis lyrata HOM05D004322 ORTHO05D005033 3.5e-70 268.9 217 61.8
BolC3t14638H Brassica oleracea HOM05D004322 ORTHO05D005033 4.6e-70 268.5 217 61.8
A08p10330 Brassica napus HOM05D004322 ORTHO05D005033 5.9e-70 268.1 216 60.2
AT4G14110 Arabidopsis thaliana HOM05D004322 ORTHO05D005033 1.0e-69 267.3 217 61.8
Lj9A313T47 Lonicera japonica HOM05D004322 ORTHO05D005033 3.0e-69 265.8 189 71.4
MSTRG.5246 Avicennia marina HOM05D004322 ORTHO05D005033 1.5e-68 263.5 217 59.4
CARHR220130 Cardamine hirsuta HOM05D004322 ORTHO05D005033 1.9e-68 263.1 217 59.4
Cfa015337 Carpinus fangiana HOM05D004322 ORTHO05D005033 2.5e-68 262.7 195 67.7
THA.LOC104804784 Tarenaya hassleriana HOM05D004322 ORTHO05D005033 7.3e-68 261.2 217 59.0
CDE05G0654 Ceratophyllum demersum HOM05D004322 ORTHO05D005033 1.6e-67 260.0 216 57.4
Nitab4.5_0000249g0270 Nicotiana tabacum HOM05D004322 ORTHO05D005033 1.6e-67 260.0 195 67.7
Actinidia00226 Actinidia chinensis HOM05D004322 ORTHO05D005033 2.0e-65 253.1 217 64.5
HPP92_016157 Vanilla planifolia HOM05D004322 ORTHO05D005033 2.0e-65 253.1 216 57.4
Lsat_1_v5_gn_9_116181 Lactuca sativa HOM05D004322 ORTHO05D005033 5.8e-65 251.5 209 60.3
unitig_62.g23621 Utricularia gibba HOM05D004322 ORTHO05D005033 1.3e-64 250.4 216 58.3
Dinv19343 Davidia involucrata HOM05D004322 ORTHO05D005033 3.7e-64 248.8 174 73.0
Medtr0153s0030 Medicago truncatula HOM05D004322 ORTHO05D005033 4.9e-64 248.4 189 64.6
BcaC01g05770 Brassica carinata HOM05D004322 ORTHO05D005033 4.1e-63 245.4 199 60.8
Sc10g0004980 Simmondsia chinensis HOM05D004322 ORTHO05D005033 9.2e-63 244.2 191 62.8
Rhsim11G0132600 Rhododendron simsii HOM05D004322 ORTHO05D005033 9.5e-60 234.2 154 79.9
Os04g0428900 Oryza sativa ssp. japonica HOM05D004322 ORTHO05D005033 3.1e-58 229.2 216 52.8
Zm00001eb082980 Zea mays HOM05D004322 ORTHO05D005033 2.6e-57 226.1 216 50.5
Sabra01G0160700 Salix brachista HOM05D004322 ORTHO05D005033 4.4e-57 225.3 185 59.5
Prupe.1G186200 Prunus persica HOM05D004322 ORTHO05D005033 6.4e-56 221.5 179 61.5
Nitab4.5_0003071g0090 Nicotiana tabacum HOM05D004322 ORTHO05D005033 1.6e-54 216.9 216 53.7
SMO353G0429 Selaginella moellendorffii HOM05D004322 ORTHO05D005033 2.0e-49 199.9 216 44.9
BolC9t60208H Brassica oleracea HOM05D004322 ORTHO05D005033 4.9e-48 195.3 164 58.5
AagrBONN_evm.TU.Sc2ySwM_228.2369 Anthoceros agrestis HOM05D004322 ORTHO05D005033 1.0e-45 187.6 216 41.2
Mapoly0036s0096 Marchantia polymorpha HOM05D004322 ORTHO05D005033 1.9e-44 183.3 213 42.7
Thecc.07G026500 Theobroma cacao HOM05D004322 ORTHO05D005033 4.3e-44 182.2 203 51.2
Haze_01278 Corylus avellana HOM05D004322 ORTHO05D005033 7.3e-44 181.4 124 66.1
Psat1g219720 Pisum sativum HOM05D004322 ORTHO05D005033 2.8e-43 179.5 151 56.3
Cc02_g22150 Coffea canephora HOM05D004322 ORTHO05D005033 2.4e-42 176.4 125 64.8
Lalb_Chr15g0090601 Lupinus albus HOM05D004322 ORTHO05D005033 4.0e-42 175.6 117 65.0
Pp3c14_8990 Physcomitrium patens HOM05D004322 ORTHO05D005033 4.0e-42 175.6 209 41.6
QL04p052291 Quercus lobata HOM05D004322 ORTHO05D005033 2.6e-41 172.9 119 68.1
CDE05G2724 Ceratophyllum demersum HOM05D004322 ORTHO05D005033 4.9e-40 168.7 148 56.8
CBR_g26281 Chara braunii HOM05D004322 ORTHO05D005033 1.1e-39 167.5 178 46.1
THA.LOC104809099 Tarenaya hassleriana HOM05D004322 ORTHO05D005033 4.2e-39 165.6 152 52.0
SHI16603 Sapria himalayana HOM05D004322 ORTHO05D005033 9.3e-39 164.5 171 47.4
SEGI_09552 Sequoiadendron giganteum HOM05D004322 ORTHO05D005033 5.6e-36 155.2 119 53.8
SEGI_31940 Sequoiadendron giganteum HOM05D004322 ORTHO05D005033 9.6e-36 154.5 119 53.8
Cpa.g.sc157.24 Carica papaya HOM05D004322 ORTHO05D005033 4.8e-35 152.1 130 65.4
CBR_g4180 Chara braunii HOM05D004322 ORTHO05D005033 1.3e-32 144.1 161 46.0
Medtr0153s0020 Medicago truncatula HOM05D004322 ORTHO05D005033 1.3e-32 144.1 89 66.3
Lalb_Chr15g0090591 Lupinus albus HOM05D004322 ORTHO05D005033 9.3e-31 137.9 77 89.6
Cc02_g22140 Coffea canephora HOM05D004322 ORTHO05D005033 1.5e-28 130.6 79 81.0
Sabra01G0160600 Salix brachista HOM05D004322 ORTHO05D005033 1.9e-28 130.2 77 84.4
Zm00001eb422450 Zea mays HOM05D004322 ORTHO05D005033 4.3e-28 129.0 141 41.8
Manes.10G133677 Manihot esculenta HOM05D004322 ORTHO05D005033 3.6e-27 125.9 77 83.1
CAN.G1352.10 Capsicum annuum HOM05D004322 ORTHO05D005033 4.8e-27 125.6 77 81.8
Oeu044826.1 Olea europaea HOM05D004322 ORTHO05D005033 6.9e-26 121.7 77 77.9
Oeu044828.1 Olea europaea HOM05D004322 ORTHO05D005033 6.9e-26 121.7 77 77.9
CAN.G1352.11 Capsicum annuum HOM05D004322 ORTHO05D005033 9.0e-26 121.3 117 53.8
Potri.003G022001 Populus trichocarpa HOM05D004322 ORTHO05D005033 4.5e-25 119.0 77 76.6
Glyma.10G118567 Glycine max HOM05D004322 ORTHO05D005033 2.2e-24 116.7 69 84.1
Gohir.D08G183600 Gossypium hirsutum HOM05D004322 ORTHO05D005033 2.9e-24 116.3 77 72.7
QL11p019123 Quercus lobata HOM05D004322 ORTHO05D005033 1.9e-23 113.6 71 80.3
Gohir.D12G215800 Gossypium hirsutum HOM05D004322 ORTHO05D005033 6.0e-22 108.6 75 72.0
SEGI_18567 Sequoiadendron giganteum HOM05D004322 ORTHO05D005033 1.1e-20 104.4 81 64.2
Thecc.07G026400 Theobroma cacao HOM05D004322 ORTHO05D005033 3.3e-20 102.8 103 46.6
MBI18_g28448_MAGBIO Magnolia biondii HOM05D004322 ORTHO05D005033 7.4e-20 101.7 71 64.8
Oeu012736.1 Olea europaea HOM05D004322 ORTHO05D005033 7.4e-20 101.7 72 70.8
Cpa.g.sc157.23 Carica papaya HOM05D004322 ORTHO05D005033 1.8e-18 97.1 55 76.4
Medtr0153s0060 Medicago truncatula HOM05D004322 ORTHO05D005033 2.2e-16 90.1 142 43.0
Glyma.10G118633 Glycine max HOM05D004322 ORTHO05D005033 8.4e-16 88.2 99 42.4
TPR.G19730 Trifolium pratense HOM05D004322 ORTHO05D005033 5.5e-15 85.5 62 61.3
Medtr2g007855 Medicago truncatula HOM05D004322 ORTHO05D005033 7.1e-15 85.1 62 71.0
Lsat_1_v5_gn_9_65501 Lactuca sativa HOM05D001588 ORTHO05D002975 1.6e-14 84.0 55 60.0
Lsat_1_v5_gn_7_68880 Lactuca sativa HOM05D004322 ORTHO05D005033 1.8e-13 80.5 64 53.1
QL11p019127 Quercus lobata HOM05D004322 ORTHO05D005033 6.7e-13 78.6 64 57.8
TPR.G19742 Trifolium pratense HOM05D004322 ORTHO05D005033 2.5e-12 76.6 46 82.6
BcaB04g18035 Brassica carinata HOM05D004322 ORTHO05D005033 5.3e-10 68.9 58 51.7
Cre14.g608850 Chlamydomonas reinhardtii HOM05D004322 ORTHO05D005033 2.6e-09 66.6 137 29.9
SEGI_23686 Sequoiadendron giganteum HOM05D004322 ORTHO05D005033 3.4e-09 66.2 59 52.5
BcaB07g33266 Brassica carinata HOM05D004322 ORTHO05D005033 7.6e-09 65.1 58 48.3
HPP92_016147 Vanilla planifolia HOM05D004322 ORTHO05D005033 7.6e-09 65.1 55 56.4
TAR381G0540 Trochodendron aralioides HOM05D004322 ORTHO05D005033 5.0e-08 62.4 45 68.9
VMungo0540G1689 Vigna mungo HOM05D004322 ORTHO05D005033 2.7e-06 56.6 40 72.5
Lsat_1_v5_gn_4_104380 Lactuca sativa HOM05D001722 ORTHO05D048310 6.1e-06 55.5 36 55.6


User provided reference genes

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