Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro01778 Vaccinium macrocarpon HOM05D002759 ORTHO05D003290 5.2e-125 451.1 227 100.0
Rhsim11G0131800 Rhododendron simsii HOM05D002759 ORTHO05D003290 3.9e-96 355.1 226 80.1
Actinidia39057 Actinidia chinensis HOM05D002759 ORTHO05D003290 2.6e-68 262.7 226 61.5
Dinv24260 Davidia involucrata HOM05D002759 ORTHO05D003290 1.7e-54 216.9 197 57.4
CiPaw.05G042600 Carya illinoinensis HOM05D002759 ORTHO05D003290 3.2e-50 202.6 198 52.0
GSVIVG01023021001 Vitis vinifera HOM05D002759 ORTHO05D003290 5.1e-48 195.3 211 50.7
Haze_21022 Corylus avellana HOM05D002759 ORTHO05D003290 1.1e-45 187.6 226 44.2
QL02p098685 Quercus lobata HOM05D002759 ORTHO05D003290 4.1e-45 185.7 226 46.5
Ciclev10000008m.g Citrus clementina HOM05D002759 ORTHO05D003290 7.7e-44 181.4 197 47.2
Thecc.02G041500 Theobroma cacao HOM05D002759 ORTHO05D003290 8.5e-43 177.9 217 45.2
Duzib052G0069 Durio zibethinus HOM05D002759 ORTHO05D003290 2.7e-41 172.9 215 42.8
Actinidia00220 Actinidia chinensis HOM05D002759 ORTHO05D003290 3.6e-41 172.6 121 71.1
Lj9C311G18 Lonicera japonica HOM05D002759 ORTHO05D003290 8.8e-40 167.9 205 46.3
Gohir.A01G176550 Gossypium hirsutum HOM05D002759 ORTHO05D003290 1.3e-38 164.1 190 43.7
TAR381G0620 Trochodendron aralioides HOM05D002759 ORTHO05D003290 2.2e-38 163.3 201 46.8
Eucgr.G00634 Eucalyptus grandis HOM05D002759 ORTHO05D003290 2.8e-38 162.9 202 41.1
CSS0015736 Camellia sinensis var. sinensis HOM05D002759 ORTHO05D003290 3.7e-38 162.5 159 49.7
Gohir.D01G167366 Gossypium hirsutum HOM05D002759 ORTHO05D003290 1.4e-37 160.6 192 43.8
Prupe.1G563000 Prunus persica HOM05D002759 ORTHO05D003290 1.4e-37 160.6 197 44.2
Atru.chr6.1078 Acer truncatum HOM05D002759 ORTHO05D003290 9.1e-37 157.9 226 41.6
Atru.chr6.1027 Acer truncatum HOM05D002759 ORTHO05D003290 1.2e-36 157.5 226 42.0
Manes.07G013200 Manihot esculenta HOM05D002759 ORTHO05D003290 3.5e-36 156.0 203 40.4
CANSAT11G0811 Cannabis sativa HOM05D002759 ORTHO05D003290 5.9e-36 155.2 198 39.9
TWI59G0497 Tripterygium wilfordii HOM05D002759 ORTHO05D003290 3.8e-35 152.5 201 42.8
Potri.003G021700 Populus trichocarpa HOM05D002759 ORTHO05D003290 8.5e-35 151.4 198 43.4
MD15G1418900 Malus domestica HOM05D002759 ORTHO05D003290 1.9e-34 150.2 223 39.5
Lsat_1_v5_gn_5_109460 Lactuca sativa HOM05D002759 ORTHO05D003290 1.2e-33 147.5 194 43.3
Peaxi162Scf00011g00138 Petunia axillaris HOM05D002759 ORTHO05D003290 4.7e-33 145.6 211 40.3
CAN.G1352.21 Capsicum annuum HOM05D002759 ORTHO05D003290 2.3e-32 143.3 217 41.0
RcHm_v2.0_Chr7g0222331 Rosa chinensis HOM05D002759 ORTHO05D003290 5.2e-32 142.1 205 40.0
FAN25G1732 Fragaria x ananassa HOM05D002759 ORTHO05D003290 6.8e-32 141.7 205 40.5
FAN16G3014 Fragaria x ananassa HOM05D002759 ORTHO05D003290 1.2e-31 141.0 205 40.5
Nn5g28049 Nelumbo nucifera HOM05D002759 ORTHO05D003290 3.4e-31 139.4 197 41.6
Nitab4.5_0004005g0050 Nicotiana tabacum HOM05D002759 ORTHO05D003290 3.4e-31 139.4 211 37.9
Sopen01g046990 Solanum pennellii HOM05D002759 ORTHO05D003290 3.4e-31 139.4 206 41.7
Sed0002146 Sechium edule HOM05D002759 ORTHO05D003290 5.7e-31 138.7 197 41.1
FvH4_3g35420 Fragaria vesca HOM05D002759 ORTHO05D003290 7.5e-31 138.3 205 39.5
FAN11G2638 Fragaria x ananassa HOM05D002759 ORTHO05D003290 7.5e-31 138.3 205 39.5
PGR042G2027 Punica granatum HOM05D002759 ORTHO05D003290 7.5e-31 138.3 205 39.5
Nitab4.5_0005539g0020 Nicotiana tabacum HOM05D002759 ORTHO05D003290 1.3e-30 137.5 211 38.4
Solyc01g104490.3 Solanum lycopersicum HOM05D002759 ORTHO05D003290 2.2e-30 136.7 206 41.7
Glyma.15G048100 Glycine max HOM05D002759 ORTHO05D003290 4.8e-30 135.6 190 42.1
Glyma.08G184200 Glycine max HOM05D002759 ORTHO05D003290 1.4e-29 134.0 193 40.9
DCAR_005626 Daucus carota HOM05D002759 ORTHO05D003290 3.1e-29 132.9 203 39.9
Sabra03G0013600 Salix brachista HOM05D002759 ORTHO05D003290 3.1e-29 132.9 234 35.5
CsaV3_6G032190 Cucumis sativus L. HOM05D002759 ORTHO05D003290 1.2e-28 131.0 199 38.2
Phvul.006G212401 Phaseolus vulgaris HOM05D002759 ORTHO05D003290 1.3e-27 127.5 193 38.3
arahy.Tifrunner.gnm1.ann1.YVTC7U Arachis hypogaea HOM05D002759 ORTHO05D003290 1.7e-27 127.1 191 38.2
MD00G1166400 Malus domestica HOM05D002759 ORTHO05D003290 2.2e-27 126.7 228 35.5
MELO3C011463.2 Cucumis melo HOM05D002759 ORTHO05D003290 3.8e-27 125.9 199 37.7
arahy.Tifrunner.gnm1.ann1.VDG0KY Arachis hypogaea HOM05D002759 ORTHO05D003290 6.5e-27 125.2 191 37.7
Lj1g0017629 Lotus japonicus HOM05D002759 ORTHO05D003290 1.9e-26 123.6 157 42.7
Lj6g0007416 Lotus japonicus HOM05D002759 ORTHO05D003290 2.5e-26 123.2 157 42.0
COL.COLO4_08439 Corchorus olitorius HOM05D002759 ORTHO05D003290 2.1e-25 120.2 211 37.4
Ca_00091_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 3.6e-25 119.4 193 35.2
Ca_29930_v3 Cicer arietinum L. HOM05D002759 ORTHO05D003290 3.6e-25 119.4 193 35.2
HanXRQChr10g0290421 Helianthus annuus HOM05D002759 ORTHO05D003290 6.1e-25 118.6 218 34.4
ClCG08G010020 Citrullus lanatus HOM05D002759 ORTHO05D003290 8.0e-25 118.2 194 39.2
MD08G1225900 Malus domestica HOM05D002759 ORTHO05D003290 8.0e-25 118.2 127 47.2
Migut.B00666 Erythranthe guttata HOM05D002759 ORTHO05D003290 1.0e-24 117.9 193 38.9
Cc02_g22260 Coffea canephora HOM05D002759 ORTHO05D003290 1.8e-24 117.1 196 35.2
SalBow5G5260 Salvia bowleyana HOM05D002759 ORTHO05D003290 2.3e-24 116.7 153 43.8
PSO528G0214 Papaver somniferum HOM05D002759 ORTHO05D003290 6.8e-24 115.2 202 34.7
Lalb_Chr20g0123401 Lupinus albus HOM05D002759 ORTHO05D003290 2.0e-23 113.6 194 37.1
Aqoxy3G00692 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 3.4e-23 112.8 217 35.9
SGA_v2.0_scaffold110G31284 Striga asiatica HOM05D002759 ORTHO05D003290 5.7e-23 112.1 235 33.6
TPR.G2149 Trifolium pratense HOM05D002759 ORTHO05D003290 1.7e-22 110.5 207 33.8
PSO170G2118 Papaver somniferum HOM05D002759 ORTHO05D003290 4.9e-22 109.0 202 33.7
Aa31LG6G5020 Aethionema arabicum HOM05D002759 ORTHO05D003290 1.2e-20 104.4 197 31.5
unitig_26.g9018 Utricularia gibba HOM05D002759 ORTHO05D003290 1.2e-20 104.4 155 39.4
CARHR230020 Cardamine hirsuta HOM05D002759 ORTHO05D003290 1.6e-20 104.0 197 33.5
C07p52320 Brassica napus HOM05D002759 ORTHO05D003290 2.0e-20 103.6 192 32.8
BolC7t45725H Brassica oleracea HOM05D002759 ORTHO05D003290 2.0e-20 103.6 192 32.8
THA.LOC104814230 Tarenaya hassleriana HOM05D002759 ORTHO05D003290 5.9e-20 102.1 195 31.8
A03p53910 Brassica napus HOM05D002759 ORTHO05D003290 7.7e-20 101.7 192 33.9
BraA03t14460Z Brassica rapa HOM05D002759 ORTHO05D003290 7.7e-20 101.7 192 33.9
BraA01t01371Z Brassica rapa HOM05D002759 ORTHO05D003290 1.0e-19 101.3 197 31.5
Medtr7g023120 Medicago truncatula HOM05D002759 ORTHO05D003290 1.0e-19 101.3 193 32.6
A01p14240 Brassica napus HOM05D002759 ORTHO05D003290 3.8e-19 99.4 197 31.0
ECA234G1843 Erigeron canadensis HOM05D002759 ORTHO05D003290 5.0e-19 99.0 125 38.4
Thhalv10024187m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 5.0e-19 99.0 197 31.5
Psat1g219920 Pisum sativum HOM05D002759 ORTHO05D003290 6.6e-19 98.6 194 33.0
AT4G22970 Arabidopsis thaliana HOM05D002759 ORTHO05D003290 1.9e-18 97.1 197 30.5
Sp7g21060 Schrenkiella parvula HOM05D002759 ORTHO05D003290 2.5e-18 96.7 191 31.4
C01p17510 Brassica napus HOM05D002759 ORTHO05D003290 4.3e-18 95.9 195 31.8
BcaC09g51048 Brassica carinata HOM05D002759 ORTHO05D003290 5.6e-18 95.5 195 31.8
BolC1t01691H Brassica oleracea HOM05D002759 ORTHO05D003290 5.6e-18 95.5 195 31.8
Thhalv10029518m.g Eutrema salsugineum HOM05D002759 ORTHO05D003290 1.2e-17 94.4 194 29.4
BcaNung01007 Brassica carinata HOM05D002759 ORTHO05D003290 2.8e-17 93.2 197 28.9
Carub.0007s1830 Capsella rubella HOM05D002759 ORTHO05D003290 2.8e-17 93.2 197 29.4
Medtr2g007790 Medicago truncatula HOM05D002759 ORTHO05D003290 2.8e-17 93.2 205 31.7
AL7G30550 Arabidopsis lyrata HOM05D002759 ORTHO05D003290 2.3e-16 90.1 196 30.6
Aqoxy7G02142 Aquilegia oxysepala HOM05D002759 ORTHO05D003290 4.0e-16 89.4 146 38.4
FvH4_5g29931 Fragaria vesca HOM05D002759 ORTHO05D003290 1.3e-14 84.3 156 32.1
AL7G28920 Arabidopsis lyrata HOM05D002759 ORTHO05D003290 1.4e-13 80.9 196 29.6
Cpa.g.sc148.29 Carica papaya HOM05D002759 ORTHO05D003290 7.0e-13 78.6 85 48.2
Rhsim06G0195300 Rhododendron simsii HOM05D000435 ORTHO05D000430 2.0e-12 77.0 48 79.2
FAN18G4196 Fragaria x ananassa HOM05D002759 ORTHO05D003290 4.6e-12 75.9 131 33.6
CsaV3_6G032170 Cucumis sativus L. HOM05D002759 ORTHO05D003290 5.0e-11 72.4 98 43.9
ATR0661G443 Amborella trichopoda HOM05D002759 ORTHO05D003290 3.3e-10 69.7 186 28.0
SHI26603 Sapria himalayana HOM05D002759 ORTHO05D003290 3.6e-09 66.2 288 23.6
CSS0025274 Camellia sinensis var. sinensis HOM05D002759 ORTHO05D003290 6.2e-09 65.5 50 66.0
Zm00001eb193470 Zea mays HOM05D002759 ORTHO05D003290 1.2e-07 61.2 147 29.9
BcaB05g23798 Brassica carinata HOM05D002759 ORTHO05D003290 9.8e-07 58.2 195 24.6


User provided reference genes

Program Settings