Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro01761 Vaccinium macrocarpon HOM05D003347 ORTHO05D003821 5.4e-72 274.6 184 100.0
Haze_25385 Corylus avellana HOM05D003347 ORTHO05D003821 9.7e-21 104.4 135 49.6
TWI31G0129 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 3.1e-19 99.4 132 49.2
MD15G1423300 Malus domestica HOM05D003347 ORTHO05D003821 5.3e-19 98.6 81 70.4
QL10p039663 Quercus lobata HOM05D003347 ORTHO05D003821 1.2e-18 97.4 129 49.6
TAR628G0882 Trochodendron aralioides HOM05D003347 ORTHO05D003821 1.2e-18 97.4 74 75.7
Lj9C306T9 Lonicera japonica HOM05D003347 ORTHO05D003821 1.7e-17 93.6 73 75.3
Oeu008894.1 Olea europaea HOM05D003347 ORTHO05D003821 2.9e-17 92.8 86 64.0
Oeu008895.1 Olea europaea HOM05D003347 ORTHO05D003821 2.9e-17 92.8 86 64.0
Sc03g0004210 Simmondsia chinensis HOM05D003347 ORTHO05D003821 6.5e-17 91.7 74 71.6
Oeu033124.1 Olea europaea HOM05D002729 ORTHO05D003163 8.5e-17 91.3 124 51.6
Hund07201 Selenicereus undatus HOM05D003347 ORTHO05D003821 8.5e-17 91.3 132 46.2
Atru.chr6.636 Acer truncatum HOM05D003347 ORTHO05D003821 1.4e-16 90.5 72 73.6
HanXRQChr03g0071751 Helianthus annuus HOM05D003347 ORTHO05D003821 1.9e-16 90.1 74 68.9
HPP92_009365 Vanilla planifolia HOM05D003347 ORTHO05D003821 1.9e-16 90.1 71 67.6
CDE08G0312 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 7.2e-16 88.2 128 46.1
TWI14G1287 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 9.4e-16 87.8 79 64.6
Hma1.2p1_1197F.1_g266100 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 1.6e-15 87.0 72 72.2
Nn5g28237 Nelumbo nucifera HOM05D003347 ORTHO05D003821 2.1e-15 86.7 71 69.0
TAR381G0729 Trochodendron aralioides HOM05D003347 ORTHO05D003821 3.6e-15 85.9 72 70.8
Hund12985 Selenicereus undatus HOM05D003347 ORTHO05D003821 4.7e-15 85.5 162 40.7
Haze_01671 Corylus avellana HOM05D003347 ORTHO05D003821 6.1e-15 85.1 73 69.9
CDE06G2684 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 7.9e-15 84.7 76 65.8
PSO063G2612 Papaver somniferum HOM05D003347 ORTHO05D003821 7.9e-15 84.7 82 62.2
HanXRQChr01g0017031 Helianthus annuus HOM05D003347 ORTHO05D003821 1.0e-14 84.3 124 44.4
Lj1g0014274 Lotus japonicus HOM05D003347 ORTHO05D003821 1.0e-14 84.3 74 64.9
TWI59G0889 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 1.0e-14 84.3 74 67.6
CSS0030084 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 1.4e-14 84.0 71 73.2
Glyma.06G158900 Glycine max HOM05D003347 ORTHO05D003821 1.4e-14 84.0 129 45.0
Cfa002207 Carpinus fangiana HOM05D003347 ORTHO05D003821 2.3e-14 83.2 68 64.7
CDE06G2842 Ceratophyllum demersum HOM05D003347 ORTHO05D003821 3.0e-14 82.8 74 66.2
Dinv24283 Davidia involucrata HOM05D003347 ORTHO05D003821 3.9e-14 82.4 78 65.4
Cc02_g22510 Coffea canephora HOM05D003347 ORTHO05D003821 5.1e-14 82.0 131 45.8
Lsat_1_v5_gn_9_118960 Lactuca sativa HOM05D003347 ORTHO05D003821 5.1e-14 82.0 76 61.8
Phvul.009G151400 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 6.7e-14 81.6 70 64.3
AUR62014268 Chenopodium quinoa HOM05D003347 ORTHO05D003821 1.1e-13 80.9 74 63.5
AUR62042720 Chenopodium quinoa HOM05D003347 ORTHO05D003821 2.0e-13 80.1 82 58.5
Zm00001eb113690 Zea mays HOM05D003347 ORTHO05D003821 2.6e-13 79.7 73 61.6
CAN.G1577.23 Capsicum annuum HOM05D003347 ORTHO05D003821 3.3e-13 79.3 131 45.0
Cpa.g.sc37.62 Carica papaya HOM05D003347 ORTHO05D003821 3.3e-13 79.3 79 55.7
Lalb_Chr11g0068781 Lupinus albus HOM05D003347 ORTHO05D003821 4.4e-13 79.0 68 63.2
VMungo1309G3119 Vigna mungo HOM05D003347 ORTHO05D003821 9.7e-13 77.8 74 60.8
MELO3C014381.2 Cucumis melo HOM05D003347 ORTHO05D003821 1.3e-12 77.4 70 60.0
Hma1.2p1_0217F.1_g092040 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 1.3e-12 77.4 72 63.9
QL11p018508 Quercus lobata HOM05D003347 ORTHO05D003821 1.3e-12 77.4 74 63.5
Atru.chr4.1125 Acer truncatum HOM05D003347 ORTHO05D003821 1.7e-12 77.0 70 60.0
Medtr2g007150 Medicago truncatula HOM05D003347 ORTHO05D003821 1.7e-12 77.0 70 67.1
TPR.G28695 Trifolium pratense HOM05D003347 ORTHO05D003821 2.2e-12 76.6 127 40.9
TAR376G0009 Trochodendron aralioides HOM05D003347 ORTHO05D003821 2.2e-12 76.6 130 44.6
Zm00001eb197610 Zea mays HOM05D003347 ORTHO05D003821 2.2e-12 76.6 73 58.9
CSS0039803 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 2.8e-12 76.3 118 44.1
CSS0043936 Camellia sinensis var. sinensis HOM05D003347 ORTHO05D003821 2.8e-12 76.3 118 44.1
AUR62006920 Chenopodium quinoa HOM05D003347 ORTHO05D003821 2.8e-12 76.3 130 40.8
COL.COLO4_12116 Corchorus olitorius HOM05D012218 ORTHO05D003821 2.8e-12 76.3 72 58.3
Lj4A831G75 Lonicera japonica HOM05D003347 ORTHO05D003821 2.8e-12 76.3 112 45.5
Aqoxy6G00189 Aquilegia oxysepala HOM05D003347 ORTHO05D003821 4.8e-12 75.5 74 62.2
CsaV3_6G037360 Cucumis sativus L. HOM05D003347 ORTHO05D003821 6.3e-12 75.1 70 57.1
Phvul.006G214600 Phaseolus vulgaris HOM05D003347 ORTHO05D003821 6.3e-12 75.1 74 62.2
Sed0017913 Sechium edule HOM05D003347 ORTHO05D003821 8.2e-12 74.7 128 42.2
VMungo0540G0141 Vigna mungo HOM05D003347 ORTHO05D003821 8.2e-12 74.7 72 62.5
Psat1g221480 Pisum sativum HOM05D003347 ORTHO05D003821 3.1e-11 72.8 131 42.7
Potri.019G001900 Populus trichocarpa HOM05D003347 ORTHO05D003821 4.1e-11 72.4 65 61.5
PGR042G0677 Punica granatum HOM05D003347 ORTHO05D003821 4.1e-11 72.4 70 62.9
Nitab4.5_0000816g0010 Nicotiana tabacum HOM05D003347 ORTHO05D003821 5.3e-11 72.0 101 49.5
CiPaw.03G114900 Carya illinoinensis HOM05D003347 ORTHO05D003821 7.0e-11 71.6 53 69.8
Peaxi162Scf00011g00421 Petunia axillaris HOM05D003347 ORTHO05D003821 7.0e-11 71.6 97 49.5
Psat5g058160 Pisum sativum HOM05D003347 ORTHO05D003821 1.2e-10 70.9 72 51.4
Cfa005522 Carpinus fangiana HOM05D003347 ORTHO05D003821 1.6e-10 70.5 70 62.9
Pp3c15_6590 Physcomitrium patens HOM05D003347 ORTHO05D003821 1.6e-10 70.5 64 57.8
ECA236G0662 Erigeron canadensis HOM05D003347 ORTHO05D003821 2.0e-10 70.1 74 59.5
SMO163G0068 Selaginella moellendorffii HOM05D003347 ORTHO05D003821 3.5e-10 69.3 129 42.6
Lj6g0014149 Lotus japonicus HOM05D003347 ORTHO05D003821 7.7e-10 68.2 72 56.9
EL10Ac4g09689 Beta vulgaris HOM05D003347 ORTHO05D003821 1.0e-09 67.8 75 49.3
Gohir.D04G172100 Gossypium hirsutum HOM05D003347 ORTHO05D003821 1.0e-09 67.8 71 59.2
Sed0005094 Sechium edule HOM05D003347 ORTHO05D003821 1.0e-09 67.8 66 60.6
Hma1.2p1_0930F.1_g238020 Hydrangea macrophylla HOM05D003347 ORTHO05D003821 1.3e-09 67.4 63 61.9
Sc09g0002030 Simmondsia chinensis HOM05D003347 ORTHO05D003821 1.7e-09 67.0 130 39.2
Dinv19368 Davidia involucrata HOM05D003347 ORTHO05D003821 6.5e-09 65.1 46 76.1
Ca_00076_v3 Cicer arietinum L. HOM05D005880 ORTHO05D007114 8.5e-09 64.7 71 54.9
Gorai.012G161200 Gossypium raimondii HOM05D003347 ORTHO05D003821 8.5e-09 64.7 126 41.3
Actinidia26147 Actinidia chinensis HOM05D003347 ORTHO05D003821 1.5e-08 63.9 102 45.1
RcHm_v2.0_Chr2g0123211 Rosa chinensis HOM05D003347 ORTHO05D003821 1.5e-08 63.9 70 55.7
TWI79G0161 Tripterygium wilfordii HOM05D003347 ORTHO05D003821 1.5e-08 63.9 125 37.6
BcaC05g24971 Brassica carinata HOM05D003347 ORTHO05D003821 2.5e-08 63.2 73 54.8
Duzib132G0710 Durio zibethinus HOM05D003347 ORTHO05D003821 2.5e-08 63.2 72 56.9
Nitab4.5_0000496g0140 Nicotiana tabacum HOM05D003347 ORTHO05D003821 2.5e-08 63.2 82 47.6
Peaxi162Scf00152g01328 Petunia axillaris HOM05D003347 ORTHO05D003821 2.5e-08 63.2 96 45.8
TPR.G2109 Trifolium pratense HOM05D003347 ORTHO05D003821 2.5e-08 63.2 69 58.0
arahy.Tifrunner.gnm1.ann1.X7GISI Arachis hypogaea HOM05D003347 ORTHO05D003821 3.2e-08 62.8 74 51.4
Gohir.A09G006400 Gossypium hirsutum HOM05D003347 ORTHO05D003821 3.2e-08 62.8 130 37.7
Dinv34344 Davidia involucrata HOM05D003347 ORTHO05D003821 4.2e-08 62.4 100 42.0
MBI03_g33029_MAGBIO Magnolia biondii HOM05D003347 ORTHO05D003821 4.2e-08 62.4 43 74.4
MD08G1229400 Malus domestica HOM05D003347 ORTHO05D003821 4.2e-08 62.4 71 56.3
unitig_60.g25508 Utricularia gibba HOM05D003347 ORTHO05D003821 4.2e-08 62.4 128 38.3
PGR102G0439 Punica granatum HOM05D003347 ORTHO05D003821 5.5e-08 62.0 130 40.0
GSVIVG01022926001 Vitis vinifera HOM05D003347 ORTHO05D003821 5.5e-08 62.0 69 58.0
Gohir.A04G127400 Gossypium hirsutum HOM05D003347 ORTHO05D003821 9.4e-08 61.2 72 54.2
Potri.001G306100 Populus trichocarpa HOM05D003347 ORTHO05D003821 1.2e-07 60.8 64 54.7
MSTRG.23472 Avicennia marina HOM05D003347 ORTHO05D003821 1.6e-07 60.5 74 51.4
CANSAT11G2200 Cannabis sativa HOM05D003347 ORTHO05D003821 1.6e-07 60.5 44 72.7
Migut.H00863 Erythranthe guttata HOM05D003347 ORTHO05D003821 1.6e-07 60.5 74 51.4
Thhalv10008376m.g Eutrema salsugineum HOM05D003347 ORTHO05D003821 1.6e-07 60.5 74 52.7
ATR0684G168 Amborella trichopoda HOM05D003347 ORTHO05D003821 2.1e-07 60.1 74 52.7
EL10Ac6g14071 Beta vulgaris HOM05D003347 ORTHO05D003821 2.1e-07 60.1 74 52.7
CARHR051920 Cardamine hirsuta HOM05D003347 ORTHO05D003821 2.1e-07 60.1 75 50.7
Gorai.006G007100 Gossypium raimondii HOM05D003347 ORTHO05D003821 2.1e-07 60.1 128 36.7
Psat5g058080 Pisum sativum HOM05D003347 ORTHO05D003821 2.1e-07 60.1 119 37.0
Prupe.4G280500 Prunus persica HOM05D003347 ORTHO05D003821 2.1e-07 60.1 44 68.2
Sabra01G0163000 Salix brachista HOM05D003347 ORTHO05D003821 2.1e-07 60.1 59 61.0
MD15G1137800 Malus domestica HOM05D003347 ORTHO05D003821 2.7e-07 59.7 99 40.4
THA.LOC104819278 Tarenaya hassleriana HOM05D003347 ORTHO05D003821 2.7e-07 59.7 69 52.2
Gohir.D12G040600 Gossypium hirsutum HOM05D003347 ORTHO05D003821 3.6e-07 59.3 70 52.9
Oeu037839.1 Olea europaea HOM05D003347 ORTHO05D003821 3.6e-07 59.3 120 39.2
Nitab4.5_0003344g0020 Nicotiana tabacum HOM05D003347 ORTHO05D003821 4.7e-07 58.9 46 69.6
ClCG09G014210 Citrullus lanatus HOM05D003347 ORTHO05D003821 6.1e-07 58.5 70 51.4
Dinv05136 Davidia involucrata HOM05D000040 ORTHO05D000267 6.1e-07 58.5 70 52.9
Thecc.01G142300 Theobroma cacao HOM05D003347 ORTHO05D003821 1.0e-06 57.8 133 36.1
A06p07670 Brassica napus HOM05D003347 ORTHO05D003821 1.4e-06 57.4 74 50.0
BraA06t23968Z Brassica rapa HOM05D003347 ORTHO05D003821 1.4e-06 57.4 74 50.0
CiPaw.05G044400 Carya illinoinensis HOM05D003347 ORTHO05D003821 1.4e-06 57.4 42 73.8
FAN28G2623 Fragaria x ananassa HOM05D003347 ORTHO05D003821 1.4e-06 57.4 140 34.3
Solyc01g104160.4 Solanum lycopersicum HOM05D003347 ORTHO05D003821 1.4e-06 57.4 44 63.6
Solyc05g056460.4 Solanum lycopersicum HOM05D003347 ORTHO05D003821 1.8e-06 57.0 74 47.3
PGSC0003DMG400023323 Solanum tuberosum HOM05D003347 ORTHO05D003821 1.8e-06 57.0 74 47.3
Sabra19G0015000 Salix brachista HOM05D003347 ORTHO05D003821 2.3e-06 56.6 52 55.8
SGA_v2.0_scaffold1G00306 Striga asiatica HOM05D003347 ORTHO05D003821 2.3e-06 56.6 74 48.6
DCAR_029250 Daucus carota HOM05D003347 ORTHO05D003821 3.0e-06 56.2 70 48.6
Manes.07G015700 Manihot esculenta HOM05D003347 ORTHO05D003821 3.0e-06 56.2 71 52.1
BolC5t29665H Brassica oleracea HOM05D003347 ORTHO05D003821 4.0e-06 55.8 70 51.4
SGA_v2.0_scaffold189G40392 Striga asiatica HOM05D000087 ORTHO05D000793 4.0e-06 55.8 119 35.3
Nitab4.5_0013117g0020 Nicotiana tabacum HOM05D003347 ORTHO05D003821 5.2e-06 55.5 78 44.9
ECA248G0339 Erigeron canadensis HOM05D003347 ORTHO05D003821 6.7e-06 55.1 44 63.6
Nn1g08766 Nelumbo nucifera HOM05D003347 ORTHO05D003821 6.7e-06 55.1 71 54.9
C05p09260 Brassica napus HOM05D003347 ORTHO05D003821 8.8e-06 54.7 70 50.0
Mapoly0020s0030 Marchantia polymorpha HOM05D003347 ORTHO05D003821 8.8e-06 54.7 51 56.9
THA.LOC104823661 Tarenaya hassleriana HOM05D003347 ORTHO05D003821 8.8e-06 54.7 72 47.2


User provided reference genes

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