Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 2.1e-285 984.9 478 100.0
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 1.7e-162 576.6 463 68.0
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 8.9e-159 564.3 443 65.9
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 3.4e-158 562.4 437 66.1
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 6.4e-157 558.1 426 67.8
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 2.4e-156 556.2 411 68.6
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 1.6e-155 553.5 452 63.7
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 4.6e-155 552.0 436 65.4
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 7.8e-155 551.2 439 65.8
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 7.8e-155 551.2 421 65.8
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 1.0e-154 550.8 460 63.3
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 2.3e-154 549.7 420 67.4
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 2.3e-154 549.7 460 63.0
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 3.0e-154 549.3 411 67.4
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 3.9e-154 548.9 420 67.4
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 8.6e-154 547.7 462 63.0
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 5.6e-153 545.0 443 63.4
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 7.3e-153 544.7 417 68.1
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 2.1e-152 543.1 422 65.6
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 2.8e-152 542.7 434 63.6
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 6.2e-152 541.6 463 63.1
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 6.2e-152 541.6 461 61.6
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 1.8e-151 540.0 414 65.7
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 3.1e-151 539.3 418 66.7
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 3.1e-151 539.3 414 67.4
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 5.2e-151 538.5 455 63.1
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 8.9e-151 537.7 415 65.1
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 8.9e-151 537.7 412 66.0
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 1.5e-150 537.0 411 65.7
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 2.2e-149 533.1 461 60.7
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 8.3e-149 531.2 454 60.4
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 1.1e-148 530.8 404 66.3
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 1.1e-148 530.8 443 61.4
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 1.2e-147 527.3 450 61.6
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 1.2e-147 527.3 419 65.4
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 1.6e-147 526.9 405 66.4
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 4.6e-147 525.4 410 65.6
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 2.3e-146 523.1 395 69.9
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 3.0e-146 522.7 448 62.9
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 4.3e-145 518.8 411 64.2
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 5.6e-145 518.5 412 63.6
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 9.5e-145 517.7 473 58.6
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 1.6e-144 516.9 470 58.7
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 2.1e-144 516.5 410 63.4
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 3.6e-144 515.8 411 63.5
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 3.6e-144 515.8 463 59.6
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 4.7e-144 515.4 411 63.5
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 6.2e-144 515.0 412 62.9
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 8.1e-144 514.6 411 62.0
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 8.1e-144 514.6 422 61.1
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 3.1e-143 512.7 411 63.5
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 4.0e-143 512.3 411 61.6
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 5.2e-143 511.9 389 66.3
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 8.9e-143 511.1 430 59.5
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 1.2e-142 510.8 411 61.8
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 1.5e-142 510.4 411 61.6
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 4.4e-142 508.8 411 61.1
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 9.9e-142 507.7 416 62.3
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 1.4e-140 503.8 480 56.9
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 1.4e-140 503.8 468 56.2
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 1.9e-140 503.4 430 58.6
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 4.1e-140 502.3 415 60.2
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 9.2e-140 501.1 434 59.2
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 1.0e-138 497.7 421 59.1
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 2.3e-138 496.5 421 61.5
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 5.1e-138 495.4 464 55.4
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.5e-137 493.8 455 59.8
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 7.3e-137 491.5 416 63.2
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 2.8e-136 489.6 472 57.4
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 1.4e-135 487.3 391 62.4
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 1.8e-135 486.9 396 62.9
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 3.4e-134 482.6 399 61.4
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 3.8e-133 479.2 405 61.7
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 6.0e-131 471.9 399 64.9
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 1.1e-129 467.6 420 57.9
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.1e-129 467.6 416 59.6
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 1.9e-129 466.8 471 53.9
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 5.8e-126 455.3 519 49.9
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 2.4e-124 449.9 427 54.8
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 2.4e-124 449.9 404 57.7
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 2.9e-117 426.4 401 55.9
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 4.9e-117 425.6 393 59.5
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 2.1e-115 420.2 438 53.9
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 9.6e-113 411.4 488 51.4
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 2.1e-112 410.2 473 49.3
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 1.8e-106 390.6 410 48.3
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 3.0e-106 389.8 402 50.2
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.9e-100 370.5 415 51.8
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 9.0e-95 351.7 401 45.9
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 5.0e-93 345.9 388 47.2
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 3.3e-89 333.2 292 57.5
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 2.8e-88 330.1 390 45.9
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 4.1e-87 326.2 277 58.5
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 2.4e-79 300.4 352 48.6
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 1.7e-77 294.3 362 46.4
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 5.0e-77 292.7 444 44.6
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 5.9e-62 242.7 417 36.0
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 2.7e-54 217.2 126 80.2
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 3.8e-53 213.4 131 74.8
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 2.4e-39 167.5 141 61.0
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 6.0e-38 162.9 219 47.0
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 9.5e-36 155.6 116 66.4
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 8.1e-27 125.9 109 56.0
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 1.5e-25 121.7 79 64.6
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 7.6e-25 119.4 131 48.1
Duzib052G1224 Durio zibethinus HOM05D006894 ORTHO05D008724 1.2e-22 112.1 63 79.4
Solyc09g015460.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 6.0e-22 109.8 66 74.2
Pp3c5_7230 Physcomitrium patens HOM05D006894 ORTHO05D008724 1.5e-20 105.1 203 34.0
unitig_749.g14127 Utricularia gibba HOM05D006894 ORTHO05D008724 1.6e-19 101.7 79 68.4
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 4.4e-17 93.6 107 48.6
ClCG09G014050 Citrullus lanatus HOM05D006894 ORTHO05D008724 2.2e-16 91.3 62 71.0
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 1.9e-15 88.2 186 34.9
CDE06G1775 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 3.5e-14 84.0 232 29.7
Rhsim09G0048800 Rhododendron simsii HOM05D001223 ORTHO05D001058 1.5e-12 78.6 85 56.5
Cpa.g.sc3656.1 Carica papaya HOM05D006894 ORTHO05D008724 1.6e-11 75.1 72 56.9
PRCOL_00004673 Prasinoderma coloniale HOM05D006894 ORTHO05D008724 4.8e-11 73.6 413 23.5
CAN.G536.1 Capsicum annuum HOM05D006894 ORTHO05D000067 8.4e-08 62.8 33 78.8


User provided reference genes

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