Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro01727 Vaccinium macrocarpon HOM05D007992 ORTHO05D010086 3.9e-37 157.5 74 100.0
CiPaw.05G051500 Carya illinoinensis HOM05D007992 ORTHO05D010086 1.7e-21 105.5 74 70.3
CSS0028556 Camellia sinensis var. sinensis HOM05D007992 ORTHO05D010086 3.9e-21 104.4 74 70.3
Lj4g0012187 Lotus japonicus HOM05D007992 ORTHO05D010086 5.1e-21 104.0 74 68.9
Oeu045939.1 Olea europaea HOM05D007992 ORTHO05D010086 1.5e-20 102.4 74 66.2
TWI59G0747 Tripterygium wilfordii HOM05D007992 ORTHO05D010086 1.5e-20 102.4 74 68.9
THA.LOC104820254 Tarenaya hassleriana HOM05D007992 ORTHO05D010086 3.3e-20 101.3 74 67.6
Nitab4.5_0000948g0130 Nicotiana tabacum HOM05D007992 ORTHO05D010086 4.3e-20 100.9 73 67.1
Phvul.003G074700 Phaseolus vulgaris HOM05D007992 ORTHO05D010086 4.3e-20 100.9 73 67.1
QL02p099856 Quercus lobata HOM05D007992 ORTHO05D010086 4.3e-20 100.9 73 67.1
QL93p0310_0002 Quercus lobata HOM05D007992 ORTHO05D010086 4.3e-20 100.9 73 67.1
Zm00001eb138500 Zea mays HOM05D007992 ORTHO05D010086 4.3e-20 100.9 74 64.9
Manes.10G120300 Manihot esculenta HOM05D007992 ORTHO05D010086 7.3e-20 100.1 74 66.2
Peaxi162Scf00011g00937 Petunia axillaris HOM05D007992 ORTHO05D010086 9.6e-20 99.8 73 65.8
Nitab4.5_0002596g0010 Nicotiana tabacum HOM05D007992 ORTHO05D010086 1.3e-19 99.4 73 65.8
arahy.Tifrunner.gnm1.ann1.5LAZ71 Arachis hypogaea HOM05D007992 ORTHO05D010086 2.1e-19 98.6 74 64.9
arahy.Tifrunner.gnm1.ann1.UKT1PL Arachis hypogaea HOM05D007992 ORTHO05D010086 2.1e-19 98.6 74 64.9
Cc02_g22280 Coffea canephora HOM05D007992 ORTHO05D010086 2.1e-19 98.6 74 62.2
Thhalv10009288m.g Eutrema salsugineum HOM05D007992 ORTHO05D010086 2.1e-19 98.6 74 66.2
AUR62023424 Chenopodium quinoa HOM05D007992 ORTHO05D010086 2.8e-19 98.2 70 65.7
Eucgr.I02752 Eucalyptus grandis HOM05D007992 ORTHO05D010086 2.8e-19 98.2 73 64.4
Glyma.17G000900 Glycine max HOM05D007992 ORTHO05D010086 2.8e-19 98.2 69 69.6
Potri.003G009800 Populus trichocarpa HOM05D007992 ORTHO05D010086 2.8e-19 98.2 74 67.6
PGR142G0328 Punica granatum HOM05D007992 ORTHO05D010086 2.8e-19 98.2 70 67.1
Migut.B00791 Erythranthe guttata HOM05D007992 ORTHO05D010086 3.6e-19 97.8 74 63.5
AT1G09794 Arabidopsis thaliana HOM05D007992 ORTHO05D010086 4.8e-19 97.4 74 64.9
Carub.0001s0914 Capsella rubella HOM05D007992 ORTHO05D010086 4.8e-19 97.4 74 64.9
CARHR009770 Cardamine hirsuta HOM05D007992 ORTHO05D010086 4.8e-19 97.4 74 64.9
Medtr4g134900 Medicago truncatula HOM05D007992 ORTHO05D010086 6.2e-19 97.1 73 63.0
PSO782G2589 Papaver somniferum HOM05D007992 ORTHO05D010086 8.1e-19 96.7 69 66.7
CAN.G798.45 Capsicum annuum HOM05D007992 ORTHO05D010086 1.1e-18 96.3 73 64.4
Os12g0182600 Oryza sativa ssp. japonica HOM05D007992 ORTHO05D010086 1.1e-18 96.3 74 62.2
SalBow7G0224 Salvia bowleyana HOM05D007992 ORTHO05D010086 1.1e-18 96.3 74 64.9
Sed0016814 Sechium edule HOM05D007992 ORTHO05D010086 1.4e-18 95.9 70 65.7
CANSAT54G2040 Cannabis sativa HOM05D007992 ORTHO05D010086 3.1e-18 94.7 72 65.3
MD15G1432800 Malus domestica HOM05D007992 ORTHO05D010086 3.1e-18 94.7 72 65.3
GSVIVG01023280001 Vitis vinifera HOM05D007992 ORTHO05D010086 3.1e-18 94.7 74 63.5
Aa31LG1G5180 Aethionema arabicum HOM05D007992 ORTHO05D010086 5.3e-18 94.0 74 64.9
A06p06460 Brassica napus HOM05D007992 ORTHO05D010086 5.3e-18 94.0 74 64.9
BraA06t23857Z Brassica rapa HOM05D007992 ORTHO05D010086 5.3e-18 94.0 74 64.9
MELO3C031671.2 Cucumis melo HOM05D007992 ORTHO05D010086 9.0e-18 93.2 70 64.3
HanXRQChr07g0187511 Helianthus annuus HOM05D007992 ORTHO05D010086 9.0e-18 93.2 74 60.8
EL10Ac1g00780 Beta vulgaris HOM05D007992 ORTHO05D010086 1.2e-17 92.8 70 62.9
C05p07870 Brassica napus HOM05D007992 ORTHO05D010086 1.2e-17 92.8 74 63.5
BolC5t29538H Brassica oleracea HOM05D007992 ORTHO05D010086 1.2e-17 92.8 74 63.5
FAN18G3190 Fragaria x ananassa HOM05D007992 ORTHO05D010086 2.6e-17 91.7 68 66.2
Nn5g27747 Nelumbo nucifera HOM05D007992 ORTHO05D010086 2.6e-17 91.7 71 69.0
CsaV3_3G019300 Cucumis sativus L. HOM05D007992 ORTHO05D010086 4.5e-17 90.9 70 61.4
Lsat_1_v5_gn_7_79260 Lactuca sativa HOM05D007992 ORTHO05D010086 4.5e-17 90.9 74 60.8
FAN04G0058 Fragaria x ananassa HOM05D007992 ORTHO05D010086 5.8e-17 90.5 68 66.2
RcHm_v2.0_Chr7g0220841 Rosa chinensis HOM05D007992 ORTHO05D010086 7.6e-17 90.1 68 64.7
Prupe.1G576700 Prunus persica HOM05D007992 ORTHO05D010086 1.3e-16 89.4 72 63.9
DCAR_025353 Daucus carota HOM05D007992 ORTHO05D010086 2.2e-16 88.6 71 63.4
AagrBONN_evm.TU.Sc2ySwM_228.5013 Anthoceros agrestis HOM05D007992 ORTHO05D010086 2.4e-15 85.1 69 60.9
Aqoxy6G00119 Aquilegia oxysepala HOM05D007992 ORTHO05D010086 1.3e-13 79.3 72 56.9
Lalb_Chr13g0304491 Lupinus albus HOM05D007992 ORTHO05D010086 2.5e-12 75.1 68 52.9
Actinidia26161 Actinidia chinensis HOM05D000243 ORTHO05D010086 1.3e-11 72.8 55 63.6
Rhsim11G0125500 Rhododendron simsii HOM05D007992 ORTHO05D010086 4.8e-11 70.9 37 83.8
Pp3c6_8240 Physcomitrium patens HOM05D007992 ORTHO05D010086 8.1e-11 70.1 65 52.3
Sp1g08390 Schrenkiella parvula HOM05D007992 ORTHO05D010086 1.8e-10 68.9 74 52.7
MD08G1240200 Malus domestica HOM05D007992 ORTHO05D010086 2.6e-09 65.1 71 52.1
Sabra03G0005100 Salix brachista HOM05D007992 ORTHO05D010086 4.5e-09 64.3 36 80.6
SMO367G0246 Selaginella moellendorffii HOM05D007992 ORTHO05D010086 7.6e-09 63.5 69 42.0
MBI09_g08443_MAGBIO Magnolia biondii HOM05D007992 ORTHO05D010086 1.3e-08 62.8 73 46.6
TPR.G6015 Trifolium pratense HOM05D005420 ORTHO05D006524 1.7e-08 62.4 35 71.4
Gohir.D04G175400 Gossypium hirsutum HOM05D007992 ORTHO05D010086 1.1e-07 59.7 70 50.0
Gorai.012G166700 Gossypium raimondii HOM05D007992 ORTHO05D010086 1.1e-07 59.7 70 50.0
Duzib132G0994 Durio zibethinus HOM05D007992 ORTHO05D010086 2.5e-07 58.5 46 67.4
CBR_g44919 Chara braunii HOM05D007992 ORTHO05D010086 3.2e-07 58.2 66 42.4
Gohir.A04G130200 Gossypium hirsutum HOM05D007992 ORTHO05D010086 4.2e-07 57.8 46 65.2
Thecc.02G025300 Theobroma cacao HOM05D007992 ORTHO05D010086 5.5e-07 57.4 70 48.6
Atru.chr6.758 Acer truncatum HOM05D007992 ORTHO05D010086 9.3e-07 56.6 74 45.9
unitig_26.g9026 Utricularia gibba HOM05D007992 ORTHO05D010086 2.7e-06 55.1 30 83.3


User provided reference genes

Program Settings