Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro01680 Vaccinium macrocarpon HOM05D006009 ORTHO05D007389 0.0e+00 1475.7 795 100.0
Rhsim11G0117900 Rhododendron simsii HOM05D006009 ORTHO05D007389 5.4e-312 1074.7 836 75.2
CSS0016468 Camellia sinensis var. sinensis HOM05D006009 ORTHO05D007389 7.8e-285 983.8 806 70.3
Dinv29632 Davidia involucrata HOM05D006009 ORTHO05D007389 6.9e-273 944.1 806 67.5
Actinidia00150 Actinidia chinensis HOM05D006009 ORTHO05D007389 2.3e-268 929.1 805 67.3
Thecc.06G017900 Theobroma cacao HOM05D006009 ORTHO05D007389 5.3e-249 864.8 814 62.7
QL02p103325 Quercus lobata HOM05D006009 ORTHO05D007389 6.9e-249 864.4 813 62.2
Cfa004445 Carpinus fangiana HOM05D006009 ORTHO05D007389 1.0e-247 860.5 811 63.0
Duzib160G0440 Durio zibethinus HOM05D006009 ORTHO05D007389 3.3e-243 845.5 814 61.4
Hma1.2p1_0052F.1_g030000 Hydrangea macrophylla HOM05D006009 ORTHO05D007389 9.7e-243 844.0 787 64.0
Atru.chr6.240 Acer truncatum HOM05D006009 ORTHO05D007389 1.6e-242 843.2 817 62.1
Solyc01g103040.4 Solanum lycopersicum HOM05D006009 ORTHO05D007389 7.2e-238 827.8 811 61.0
CiPaw.05G001600 Carya illinoinensis HOM05D006009 ORTHO05D007389 3.9e-236 822.0 811 61.0
COL.COLO4_31132 Corchorus olitorius HOM05D006009 ORTHO05D007389 5.7e-235 818.1 784 61.5
RcHm_v2.0_Chr7g0219751 Rosa chinensis HOM05D006009 ORTHO05D007389 7.4e-235 817.8 814 60.3
Haze_09985 Corylus avellana HOM05D006009 ORTHO05D007389 1.4e-233 813.5 898 56.3
TAR628G0644 Trochodendron aralioides HOM05D006009 ORTHO05D007389 1.4e-233 813.5 807 61.0
Lsat_1_v5_gn_5_104280 Lactuca sativa HOM05D006009 ORTHO05D007389 2.4e-233 812.8 810 59.4
Nitab4.5_0002261g0040 Nicotiana tabacum HOM05D006009 ORTHO05D007389 2.4e-233 812.8 816 59.7
Nitab4.5_0005110g0010 Nicotiana tabacum HOM05D006009 ORTHO05D007389 3.1e-233 812.4 833 59.2
Manes.10G106700 Manihot esculenta HOM05D006009 ORTHO05D007389 9.1e-233 810.8 812 60.3
FvH4_5g27851 Fragaria vesca HOM05D006009 ORTHO05D007389 2.2e-231 806.2 812 59.7
Sopen01g045450 Solanum pennellii HOM05D006009 ORTHO05D007389 3.2e-230 802.4 811 59.9
HanXRQChr10g0301411 Helianthus annuus HOM05D006009 ORTHO05D007389 1.2e-229 800.4 807 59.1
MD08G1248100 Malus domestica HOM05D006009 ORTHO05D007389 1.1e-227 793.9 814 59.0
Gohir.D06G150100 Gossypium hirsutum HOM05D006009 ORTHO05D007389 9.7e-227 790.8 814 58.4
Potri.003G000900 Populus trichocarpa HOM05D006009 ORTHO05D007389 4.8e-226 788.5 816 59.3
Peaxi162Scf00011g01924 Petunia axillaris HOM05D006009 ORTHO05D007389 2.4e-225 786.2 805 58.4
Sabra03G0000300 Salix brachista HOM05D006009 ORTHO05D007389 3.1e-225 785.8 815 59.0
CsaV3_5G037180 Cucumis sativus L. HOM05D006009 ORTHO05D007389 7.0e-225 784.6 817 59.4
Gorai.010G175200 Gossypium raimondii HOM05D006009 ORTHO05D007389 3.5e-224 782.3 815 58.2
Ciclev10000419m.g Citrus clementina HOM05D006009 ORTHO05D007389 4.5e-224 781.9 815 58.4
MD15G1442900 Malus domestica HOM05D006009 ORTHO05D007389 5.0e-223 778.5 815 57.7
MELO3C022930.2 Cucumis melo HOM05D006009 ORTHO05D007389 1.1e-222 777.3 817 58.9
Ca_13530_v3 Cicer arietinum L. HOM05D006009 ORTHO05D007389 3.2e-222 775.8 813 56.7
SGA_v2.0_scaffold131G34411 Striga asiatica HOM05D006009 ORTHO05D007389 3.2e-222 775.8 821 57.2
TWI59G1011 Tripterygium wilfordii HOM05D006009 ORTHO05D007389 1.2e-221 773.9 780 58.6
Sc03g0005770 Simmondsia chinensis HOM05D006009 ORTHO05D007389 2.7e-221 772.7 810 57.8
arahy.Tifrunner.gnm1.ann1.WHZ4K1 Arachis hypogaea HOM05D006009 ORTHO05D007389 1.0e-220 770.8 763 58.6
Cc02_g23590 Coffea canephora HOM05D006009 ORTHO05D007389 1.4e-220 770.4 818 57.5
arahy.Tifrunner.gnm1.ann1.AUD1A6 Arachis hypogaea HOM05D006009 ORTHO05D007389 5.2e-220 768.5 772 57.9
ECA234G2369 Erigeron canadensis HOM05D006009 ORTHO05D007389 1.3e-218 763.8 799 57.7
TPR.G5949 Trifolium pratense HOM05D006009 ORTHO05D007389 6.3e-218 761.5 818 56.6
Glyma.17G001700 Glycine max HOM05D006009 ORTHO05D007389 4.1e-217 758.8 805 56.6
PGR142G3497 Punica granatum HOM05D006009 ORTHO05D007389 7.0e-217 758.1 814 56.6
ClCG11G000290 Citrullus lanatus HOM05D006009 ORTHO05D007389 9.1e-217 757.7 817 58.3
Prupe.1G585300 Prunus persica HOM05D006009 ORTHO05D007389 2.0e-216 756.5 761 60.1
Sp6g11340 Schrenkiella parvula HOM05D006009 ORTHO05D007389 1.0e-215 754.2 812 55.0
Thhalv10012797m.g Eutrema salsugineum HOM05D006009 ORTHO05D007389 1.7e-215 753.4 812 54.9
Migut.B00722 Erythranthe guttata HOM05D006009 ORTHO05D007389 2.9e-215 752.7 822 56.1
BcaB08g35360 Brassica carinata HOM05D006009 ORTHO05D007389 4.2e-214 748.8 808 55.1
CARHR258850 Cardamine hirsuta HOM05D006009 ORTHO05D007389 9.4e-214 747.7 810 55.3
THA.LOC104806651 Tarenaya hassleriana HOM05D006009 ORTHO05D007389 1.2e-213 747.3 816 54.9
FAN08G0569 Fragaria x ananassa HOM05D006009 ORTHO05D007389 1.6e-213 746.9 831 57.5
Lalb_Chr12g0195841 Lupinus albus HOM05D006009 ORTHO05D007389 3.6e-213 745.7 807 55.9
Eucgr.I02796 Eucalyptus grandis HOM05D006009 ORTHO05D007389 6.1e-213 745.0 814 56.4
AL8G23820 Arabidopsis lyrata HOM05D006009 ORTHO05D007389 1.8e-212 743.4 814 54.4
AT5G49880 Arabidopsis thaliana HOM05D006009 ORTHO05D007389 5.2e-212 741.9 814 54.8
MSTRG.16468 Avicennia marina HOM05D006009 ORTHO05D007389 8.8e-212 741.1 793 56.6
Medtr4g134640 Medicago truncatula HOM05D006009 ORTHO05D007389 8.8e-212 741.1 806 55.1
BraSC37t46134Z Brassica rapa HOM05D006009 ORTHO05D007389 3.4e-211 739.2 810 54.4
Psat4g001000 Pisum sativum HOM05D006009 ORTHO05D007389 4.4e-211 738.8 811 55.0
PSO017G1873 Papaver somniferum HOM05D006009 ORTHO05D007389 5.7e-211 738.4 813 56.6
Carub.0008s0974 Capsella rubella HOM05D006009 ORTHO05D007389 2.7e-208 729.6 814 54.2
Lj4g0014586 Lotus japonicus HOM05D006009 ORTHO05D007389 3.8e-207 725.7 818 54.8
Aqoxy6G00035 Aquilegia oxysepala HOM05D006009 ORTHO05D007389 8.5e-207 724.5 829 54.4
A10p08680 Brassica napus HOM05D006009 ORTHO05D007389 7.2e-206 721.5 810 53.5
Phvul.003G076200 Phaseolus vulgaris HOM05D006009 ORTHO05D007389 9.4e-206 721.1 776 55.8
DCAR_001725 Daucus carota HOM05D006009 ORTHO05D007389 2.6e-203 713.0 776 55.4
MBI03_g05191_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 1.8e-201 706.8 817 54.0
Glyma.07G272700 Glycine max HOM05D006009 ORTHO05D007389 3.1e-201 706.1 778 55.4
Lj5C283T7 Lonicera japonica HOM05D006009 ORTHO05D007389 3.1e-201 706.1 806 56.5
BcaC04g20834 Brassica carinata HOM05D006009 ORTHO05D007389 5.4e-201 705.3 808 52.7
C09p38660 Brassica napus HOM05D006009 ORTHO05D007389 2.9e-199 699.5 810 52.5
BolC9t56722H Brassica oleracea HOM05D006009 ORTHO05D007389 2.9e-199 699.5 810 52.5
AUR62042641 Chenopodium quinoa HOM05D006009 ORTHO05D007389 1.1e-193 681.0 830 51.3
Potri.004G228900 Populus trichocarpa HOM05D006009 ORTHO05D007389 4.1e-193 679.1 814 54.1
Gohir.A06G144400 Gossypium hirsutum HOM05D006009 ORTHO05D007389 1.6e-192 677.2 814 53.1
Nn5g27199 Nelumbo nucifera HOM05D006009 ORTHO05D007389 2.0e-192 676.8 800 54.8
FAN04G2183 Fragaria x ananassa HOM05D006009 ORTHO05D007389 7.3e-190 668.3 647 61.1
Ah.03g136790 Amaranthus hybridus HOM05D006009 ORTHO05D007389 8.0e-189 664.8 809 51.5
Aa31sc62G20 Aethionema arabicum HOM05D006009 ORTHO05D007389 1.0e-188 664.5 806 50.9
PSO170G2218 Papaver somniferum HOM05D006009 ORTHO05D007389 2.9e-186 656.4 786 53.7
unitig_8.g4550 Utricularia gibba HOM05D006009 ORTHO05D007389 1.6e-181 640.6 763 51.6
Oeu043610.2 Olea europaea HOM05D006009 ORTHO05D007389 6.2e-181 638.6 763 52.8
EL10Ac6g13997 Beta vulgaris HOM05D006009 ORTHO05D007389 4.0e-180 636.0 846 48.7
AUR62032470 Chenopodium quinoa HOM05D006009 ORTHO05D007389 9.8e-179 631.3 810 49.1
ATR1089G153 Amborella trichopoda HOM05D006009 ORTHO05D007389 6.6e-167 592.0 803 47.6
Os01g0877300 Oryza sativa ssp. japonica HOM05D006009 ORTHO05D007389 2.3e-159 567.0 818 45.0
CANSAT01G0444 Cannabis sativa HOM05D006009 ORTHO05D007389 9.0e-156 555.1 595 57.1
CDE05G2940 Ceratophyllum demersum HOM05D006009 ORTHO05D007389 4.3e-150 536.2 666 51.1
HPP92_003614 Vanilla planifolia HOM05D006009 ORTHO05D007389 3.2e-145 520.0 809 44.4
FAN18G4220 Fragaria x ananassa HOM05D006009 ORTHO05D007389 6.9e-132 475.7 548 54.7
Cpa.g.sc173.18 Carica papaya HOM05D006009 ORTHO05D007389 1.6e-128 464.5 448 60.7
GSVIVG01023148001 Vitis vinifera HOM05D006009 ORTHO05D007389 4.6e-128 463.0 423 66.4
Sed0013076 Sechium edule HOM05D006009 ORTHO05D007389 2.3e-127 460.7 578 51.9
CAN.G855.52 Capsicum annuum HOM05D006009 ORTHO05D007389 2.5e-126 457.2 452 59.5
Manes.10G107000 Manihot esculenta HOM05D006009 ORTHO05D007389 4.6e-120 436.4 424 62.0
GSVIVG01023147001 Vitis vinifera HOM05D006009 ORTHO05D007389 6.9e-116 422.5 388 62.1
Oeu028479.1 Olea europaea HOM05D006009 ORTHO05D007389 2.9e-106 390.6 370 61.1
CAN.G855.51 Capsicum annuum HOM05D006009 ORTHO05D007389 8.5e-98 362.5 372 58.6
SHI05061 Sapria himalayana HOM05D000030 ORTHO05D000009 8.6e-82 309.3 446 47.8
Oeu028480.1 Olea europaea HOM05D006009 ORTHO05D007389 4.9e-77 293.5 272 62.1
Sabra01G0173900 Salix brachista HOM05D006009 ORTHO05D007389 1.6e-75 288.5 493 44.4
Pp3c17_20400 Physcomitrium patens HOM05D006009 ORTHO05D007389 2.3e-74 284.6 786 32.1
ECA234G2367 Erigeron canadensis HOM05D000005 ORTHO05D000012 4.3e-73 280.4 436 45.6
Zm00001eb145920 Zea mays HOM05D006009 ORTHO05D007389 1.1e-68 265.8 444 43.0
AagrBONN_evm.TU.Sc2ySwM_228.1218 Anthoceros agrestis HOM05D006009 ORTHO05D007389 3.1e-63 247.7 750 30.4
Mapoly0034s0031 Marchantia polymorpha HOM05D006009 ORTHO05D007389 2.6e-62 244.6 756 27.9
Cpa.g.sc173.20 Carica papaya HOM05D006009 ORTHO05D007389 1.7e-61 241.9 371 45.8
CBR_g38734 Chara braunii HOM05D006009 ORTHO05D007389 3.5e-51 207.6 829 25.7
SMO343G0014 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 2.3e-50 204.9 810 25.8
Eucgr.D02407 Eucalyptus grandis HOM05D006009 ORTHO05D007389 2.7e-35 154.8 136 64.0
SEGI_34522 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 1.3e-24 119.4 84 66.7
Hund15371 Selenicereus undatus HOM05D006009 ORTHO05D007389 2.1e-24 118.6 170 48.8
SEGI_19376 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 5.8e-22 110.5 144 49.3
Psat6g226760 Pisum sativum HOM05D003335 ORTHO05D003853 1.4e-20 105.9 92 57.6
MBI06_g11892_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D004199 4.3e-17 94.4 106 54.7
SEGI_01187 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 9.6e-17 93.2 154 39.6
SEGI_26370 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 9.6e-17 93.2 124 41.9
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 1.4e-15 89.4 55 83.6
PRCOL_00003389 Prasinoderma coloniale HOM05D006009 ORTHO05D007389 2.4e-15 88.6 580 22.4
GSVIVG01023072001 Vitis vinifera HOM05D001300 ORTHO05D014438 6.9e-15 87.0 95 56.8
MBI18_g20174_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 8.5e-13 80.1 68 60.3
Glyma.14G105500 Glycine max HOM05D006009 ORTHO05D007389 1.1e-12 79.7 70 58.6
Zm00001eb351220 Zea mays HOM05D006009 ORTHO05D007389 1.8e-10 72.4 55 65.5
Oeu028483.1 Olea europaea HOM05D006009 ORTHO05D007389 8.7e-10 70.1 75 58.7
RhsimUnG0219700 Rhododendron simsii HOM05D006009 ORTHO05D007389 3.7e-08 64.7 41 80.5
MD15G1442500 Malus domestica HOM05D006009 ORTHO05D007389 8.2e-08 63.5 41 68.3
SMO343G0089 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 1.1e-07 63.2 96 40.6
MCO13G251 Micromonas commoda HOM05D006009 ORTHO05D007389 5.9e-06 57.4 90 36.7
Rhsim13G0121700 Rhododendron simsii HOM05D003220 ORTHO05D003944 5.9e-06 57.4 52 55.8


User provided reference genes

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