Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro01642 Vaccinium macrocarpon HOM05D003313 ORTHO05D004217 1.2e-146 523.1 247 100.0
Peaxi162Scf00071g00133 Petunia axillaris HOM05D003313 ORTHO05D004217 5.0e-81 305.1 240 65.0
CSS0016348 Camellia sinensis var. sinensis HOM05D003313 ORTHO05D004217 1.4e-78 297.0 236 66.5
CSS0044155 Camellia sinensis var. sinensis HOM05D003313 ORTHO05D004217 1.4e-78 297.0 236 66.5
CAN.G1379.33 Capsicum annuum HOM05D003313 ORTHO05D004217 1.4e-78 297.0 239 64.4
Hma1.2p1_0052F.1_g030180 Hydrangea macrophylla HOM05D003313 ORTHO05D004217 1.8e-78 296.6 236 66.1
SGA_v2.0_scaffold311G48230 Striga asiatica HOM05D003313 ORTHO05D004217 3.0e-78 295.8 239 64.9
CSS0008361 Camellia sinensis var. sinensis HOM05D003313 ORTHO05D004217 1.2e-77 293.9 236 65.3
CSS0011425 Camellia sinensis var. sinensis HOM05D003313 ORTHO05D004217 1.2e-77 293.9 236 65.3
Cfa004406 Carpinus fangiana HOM05D003313 ORTHO05D004217 2.6e-77 292.7 236 65.3
GSVIVG01029823001 Vitis vinifera HOM05D003313 ORTHO05D004217 7.5e-77 291.2 236 64.4
CiPaw.01G000300 Carya illinoinensis HOM05D003313 ORTHO05D004217 1.3e-76 290.4 236 64.4
Dinv30970 Davidia involucrata HOM05D003313 ORTHO05D004217 1.7e-76 290.0 236 64.8
Solyc01g102510.4 Solanum lycopersicum HOM05D003313 ORTHO05D004217 1.7e-76 290.0 239 63.6
Sopen01g044950 Solanum pennellii HOM05D003313 ORTHO05D004217 1.7e-76 290.0 239 63.6
PGSC0003DMG400018227 Solanum tuberosum HOM05D003313 ORTHO05D004217 1.7e-76 290.0 239 63.6
Prupe.8G187800 Prunus persica HOM05D003313 ORTHO05D004217 2.2e-76 289.7 236 64.0
SalBow4G0229 Salvia bowleyana HOM05D003313 ORTHO05D004217 2.9e-76 289.3 236 64.8
SalBow4G1329 Salvia bowleyana HOM05D003313 ORTHO05D004217 2.9e-76 289.3 236 64.8
Haze_14997 Corylus avellana HOM05D003313 ORTHO05D004217 3.7e-76 288.9 235 65.1
MBI07_g10943_MAGBIO Magnolia biondii HOM05D003313 ORTHO05D004217 3.7e-76 288.9 239 63.2
Cpa.g.sc17.19 Carica papaya HOM05D003313 ORTHO05D004217 8.3e-76 287.7 239 62.8
Cc02_g36830 Coffea canephora HOM05D003313 ORTHO05D004217 1.1e-75 287.3 236 63.6
Lj9C240T5 Lonicera japonica HOM05D003313 ORTHO05D004217 2.4e-75 286.2 236 63.1
Nitab4.5_0004090g0090 Nicotiana tabacum HOM05D003313 ORTHO05D004217 3.2e-75 285.8 239 61.9
Atru.chr3.2031 Acer truncatum HOM05D003313 ORTHO05D004217 4.1e-75 285.4 236 63.6
QL11p018449 Quercus lobata HOM05D003313 ORTHO05D004217 5.4e-75 285.0 236 64.0
Oeu016865.1 Olea europaea HOM05D003313 ORTHO05D004217 7.0e-75 284.6 236 64.0
Lsat_1_v5_gn_7_68120 Lactuca sativa HOM05D003313 ORTHO05D004217 1.6e-74 283.5 235 63.8
HanXRQChr15g0468281 Helianthus annuus HOM05D003313 ORTHO05D004217 2.7e-74 282.7 236 63.1
Ciclev10018511m.g Citrus clementina HOM05D003313 ORTHO05D004217 3.5e-74 282.3 238 62.2
Gohir.A08G082000 Gossypium hirsutum HOM05D003313 ORTHO05D004217 3.5e-74 282.3 236 62.7
Thecc.09G202800 Theobroma cacao HOM05D003313 ORTHO05D004217 3.5e-74 282.3 236 62.7
DCAR_032259 Daucus carota HOM05D003313 ORTHO05D004217 4.6e-74 282.0 239 61.9
RcHm_v2.0_Chr6g0282501 Rosa chinensis HOM05D003313 ORTHO05D004217 4.6e-74 282.0 236 62.7
Gohir.D08G091400 Gossypium hirsutum HOM05D003313 ORTHO05D004217 5.9e-74 281.6 236 62.3
Gorai.004G096900 Gossypium raimondii HOM05D003313 ORTHO05D004217 5.9e-74 281.6 236 62.3
Potri.006G081800 Populus trichocarpa HOM05D003313 ORTHO05D004217 5.9e-74 281.6 236 62.7
TWI38G1822 Tripterygium wilfordii HOM05D003313 ORTHO05D004217 1.0e-73 280.8 236 62.3
FvH4_2g17560 Fragaria vesca HOM05D003313 ORTHO05D004217 1.3e-73 280.4 236 62.3
FAN24G1237 Fragaria x ananassa HOM05D003313 ORTHO05D004217 1.3e-73 280.4 236 62.3
CANSAT01G1610 Cannabis sativa HOM05D003313 ORTHO05D004217 1.7e-73 280.0 236 63.1
FAN27G0740 Fragaria x ananassa HOM05D003313 ORTHO05D004217 2.3e-73 279.6 236 62.3
TAR624G0023 Trochodendron aralioides HOM05D003313 ORTHO05D004217 2.3e-73 279.6 236 62.7
TAR624G1107 Trochodendron aralioides HOM05D003313 ORTHO05D004217 2.3e-73 279.6 236 62.7
FAN15G1274 Fragaria x ananassa HOM05D003313 ORTHO05D004217 3.9e-73 278.9 236 61.9
DCAR_029311 Daucus carota HOM05D003313 ORTHO05D004217 6.6e-73 278.1 239 61.5
Lj5C312G5 Lonicera japonica HOM05D003313 ORTHO05D004217 6.6e-73 278.1 249 59.8
Nn3g20244 Nelumbo nucifera HOM05D003313 ORTHO05D004217 6.6e-73 278.1 236 62.7
MD05G1154700 Malus domestica HOM05D003313 ORTHO05D004217 1.9e-72 276.6 236 61.0
Duzib150G0949 Durio zibethinus HOM05D003313 ORTHO05D004217 2.5e-72 276.2 236 61.9
ECA240G0535 Erigeron canadensis HOM05D003313 ORTHO05D004217 2.5e-72 276.2 236 61.4
PSO675G1011 Papaver somniferum HOM05D003313 ORTHO05D004217 2.5e-72 276.2 236 61.9
Aa31LG11G3950 Aethionema arabicum HOM05D003313 ORTHO05D004217 9.5e-72 274.2 236 61.0
Carub.0006s2256 Capsella rubella HOM05D003313 ORTHO05D004217 9.5e-72 274.2 236 61.0
Manes.11G105500 Manihot esculenta HOM05D003313 ORTHO05D004217 1.2e-71 273.9 236 60.6
Sabra06G0061800 Salix brachista HOM05D003313 ORTHO05D004217 1.2e-71 273.9 231 63.6
PSO541G4460 Papaver somniferum HOM05D003313 ORTHO05D004217 2.1e-71 273.1 236 61.4
Sed0021054 Sechium edule HOM05D003313 ORTHO05D004217 2.8e-71 272.7 236 60.2
Hund24556 Selenicereus undatus HOM05D003313 ORTHO05D004217 2.8e-71 272.7 236 61.0
CARHR188770 Cardamine hirsuta HOM05D003313 ORTHO05D004217 3.6e-71 272.3 236 60.6
Thhalv10003520m.g Eutrema salsugineum HOM05D003313 ORTHO05D004217 3.6e-71 272.3 236 61.0
AL6G36310 Arabidopsis lyrata HOM05D003313 ORTHO05D004217 4.7e-71 271.9 236 61.0
AT5G24710 Arabidopsis thaliana HOM05D003313 ORTHO05D004217 4.7e-71 271.9 236 61.0
Migut.B00692 Erythranthe guttata HOM05D003313 ORTHO05D004217 4.7e-71 271.9 237 61.2
ClCG09G008380 Citrullus lanatus HOM05D003313 ORTHO05D004217 6.1e-71 271.6 236 59.3
BcaNung01252 Brassica carinata HOM05D003313 ORTHO05D004217 8.0e-71 271.2 236 60.6
Sp2g22700 Schrenkiella parvula HOM05D003313 ORTHO05D004217 1.0e-70 270.8 236 60.6
MSTRG.27897 Avicennia marina HOM05D003313 ORTHO05D004217 1.4e-70 270.4 236 61.4
BcaC04g23548 Brassica carinata HOM05D003313 ORTHO05D004217 1.4e-70 270.4 236 60.6
A09p06410 Brassica napus HOM05D003313 ORTHO05D004217 1.4e-70 270.4 236 60.6
C09p07140 Brassica napus HOM05D003313 ORTHO05D004217 1.4e-70 270.4 236 60.6
BolC9t53629H Brassica oleracea HOM05D003313 ORTHO05D004217 1.4e-70 270.4 236 60.6
BraA09t36285Z Brassica rapa HOM05D003313 ORTHO05D004217 1.4e-70 270.4 236 60.6
Zm00001eb359400 Zea mays HOM05D003313 ORTHO05D004217 1.4e-70 270.4 236 60.6
AUR62018429 Chenopodium quinoa HOM05D003313 ORTHO05D004217 1.8e-70 270.0 236 60.2
MELO3C021123.2 Cucumis melo HOM05D003313 ORTHO05D004217 1.8e-70 270.0 236 59.3
CsaV3_7G026710 Cucumis sativus L. HOM05D003313 ORTHO05D004217 1.8e-70 270.0 236 59.3
A06p35540 Brassica napus HOM05D003313 ORTHO05D004217 2.3e-70 269.6 236 60.2
BraA06t26479Z Brassica rapa HOM05D003313 ORTHO05D004217 2.3e-70 269.6 236 60.2
AUR62021005 Chenopodium quinoa HOM05D003313 ORTHO05D004217 2.3e-70 269.6 236 59.7
C07p43000 Brassica napus HOM05D003313 ORTHO05D004217 3.1e-70 269.2 236 60.2
BolC7t44829H Brassica oleracea HOM05D003313 ORTHO05D004217 3.1e-70 269.2 236 60.2
ATR0620G123 Amborella trichopoda HOM05D003313 ORTHO05D004217 4.0e-70 268.9 236 60.2
EL10Ac3g07331 Beta vulgaris HOM05D003313 ORTHO05D004217 5.2e-70 268.5 236 60.2
Phvul.001G220300 Phaseolus vulgaris HOM05D003313 ORTHO05D004217 5.2e-70 268.5 236 61.0
Sc10g0005440 Simmondsia chinensis HOM05D003313 ORTHO05D004217 5.2e-70 268.5 236 58.9
Glyma.03G226400 Glycine max HOM05D003313 ORTHO05D004217 6.8e-70 268.1 236 61.0
Os01g0653800 Oryza sativa ssp. japonica HOM05D003313 ORTHO05D004217 1.2e-69 267.3 236 59.3
THA.LOC104814960 Tarenaya hassleriana HOM05D003313 ORTHO05D004217 1.2e-69 267.3 236 59.7
Zm00001eb158110 Zea mays HOM05D003313 ORTHO05D004217 1.2e-69 267.3 236 60.2
Ca_09260_v3 Cicer arietinum L. HOM05D003313 ORTHO05D004217 2.6e-69 266.2 235 61.3
Psat3g015640 Pisum sativum HOM05D003313 ORTHO05D004217 3.4e-69 265.8 235 61.3
Medtr7g111080 Medicago truncatula HOM05D003313 ORTHO05D004217 7.5e-69 264.6 235 60.9
Ah.13g077320 Amaranthus hybridus HOM05D003313 ORTHO05D004217 1.7e-68 263.5 236 58.9
Aqoxy1G01346 Aquilegia oxysepala HOM05D003313 ORTHO05D004217 1.7e-68 263.5 236 59.7
Lalb_Chr15g0077831 Lupinus albus HOM05D003313 ORTHO05D004217 1.7e-68 263.5 236 59.7
VMungo1383G1216 Vigna mungo HOM05D003313 ORTHO05D004217 1.7e-68 263.5 236 60.2
Glyma.19G223400 Glycine max HOM05D003313 ORTHO05D004217 2.9e-68 262.7 236 60.2
Lj1g0026129 Lotus japonicus HOM05D003313 ORTHO05D004217 3.7e-68 262.3 235 60.4
TPR.G8375 Trifolium pratense HOM05D003313 ORTHO05D004217 3.7e-68 262.3 235 60.0
Lalb_Chr18g0046271 Lupinus albus HOM05D003313 ORTHO05D004217 6.4e-68 261.5 236 58.5
Nitab4.5_0011890g0010 Nicotiana tabacum HOM05D003313 ORTHO05D004217 4.1e-67 258.8 232 59.1
HPP92_021469 Vanilla planifolia HOM05D003313 ORTHO05D004217 7.0e-67 258.1 236 58.5
Peaxi162Scf00194g00629 Petunia axillaris HOM05D003313 ORTHO05D004217 4.6e-66 255.4 239 55.6
Nitab4.5_0005421g0020 Nicotiana tabacum HOM05D003313 ORTHO05D004217 5.0e-65 251.9 222 60.4
CDE09G1422 Ceratophyllum demersum HOM05D003313 ORTHO05D004217 1.5e-64 250.4 236 56.8
SEGI_06427 Sequoiadendron giganteum HOM05D003313 ORTHO05D004217 2.5e-64 249.6 236 56.4
Nitab4.5_0000399g0070 Nicotiana tabacum HOM05D003313 ORTHO05D004217 1.2e-63 247.3 232 56.5
Hund19080 Selenicereus undatus HOM05D003313 ORTHO05D004217 6.2e-63 245.0 235 55.3
DCAR_029787 Daucus carota HOM05D003313 ORTHO05D004217 4.1e-59 232.3 221 57.0
Gohir.D08G026350 Gossypium hirsutum HOM05D003313 ORTHO05D004217 7.1e-59 231.5 236 53.4
Gorai.004G022800 Gossypium raimondii HOM05D003313 ORTHO05D004217 7.1e-59 231.5 236 53.4
SMO116G0300 Selaginella moellendorffii HOM05D003313 ORTHO05D004217 1.0e-49 201.1 235 48.1
AagrBONN_evm.TU.Sc2ySwM_228.3123 Anthoceros agrestis HOM05D003313 ORTHO05D004217 2.5e-48 196.4 234 44.0
Pp3c1_36370 Physcomitrium patens HOM05D003313 ORTHO05D004217 3.6e-47 192.6 234 47.4
Mapoly0031s0124 Marchantia polymorpha HOM05D003313 ORTHO05D004217 3.6e-39 166.0 238 41.6
Eucgr.B01361 Eucalyptus grandis HOM05D003313 ORTHO05D004217 1.4e-38 164.1 119 68.1
Nitab4.5_0004668g0010 Nicotiana tabacum HOM05D003313 ORTHO05D004217 3.1e-38 162.9 123 65.9
CBR_g3034 Chara braunii HOM05D003313 ORTHO05D004217 9.9e-37 157.9 233 37.8
BcaNung07352 Brassica carinata HOM05D003313 ORTHO05D004217 2.2e-36 156.8 97 76.3
Rhsim11G0111700 Rhododendron simsii HOM05D003313 ORTHO05D004217 2.2e-36 156.8 136 62.5
SHI06534 Sapria himalayana HOM05D003313 ORTHO05D004217 9.3e-35 151.4 167 51.5
FAN27G0645 Fragaria x ananassa HOM05D003313 ORTHO05D004217 1.1e-32 144.4 153 54.2
MD10G1149000 Malus domestica HOM05D003313 ORTHO05D004217 2.5e-32 143.3 73 91.8
HanXRQChr14g0448821 Helianthus annuus HOM05D003313 ORTHO05D004217 4.8e-31 139.0 73 89.0
SHI06540 Sapria himalayana HOM05D003313 ORTHO05D004217 6.9e-30 135.2 74 82.4
unitig_699.g19829 Utricularia gibba HOM05D003313 ORTHO05D004217 2.8e-23 113.2 54 92.6
Cre12.g535350 Chlamydomonas reinhardtii HOM05D003313 ORTHO05D004217 1.9e-16 90.5 240 27.9
PRCOL_00001888 Prasinoderma coloniale HOM05D003313 ORTHO05D004217 1.3e-12 77.8 232 25.0
SMO353G0154 Selaginella moellendorffii HOM05D003313 ORTHO05D004217 1.5e-08 64.3 65 52.3
SMO334G0084 Selaginella moellendorffii HOM05D003313 ORTHO05D004217 3.7e-07 59.7 94 38.3


User provided reference genes

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