Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro01630 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 8.8e-134 480.3 250 100.0
CSS0004280 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 2.1e-82 309.7 247 71.7
CSS0028149 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 3.0e-81 305.8 247 68.4
Dinv30983 Davidia involucrata HOM05D006925 ORTHO05D008830 2.4e-78 296.2 243 65.4
Manes.06G015100 Manihot esculenta HOM05D006925 ORTHO05D008830 9.9e-77 290.8 212 68.9
unitig_8.g4519 Utricularia gibba HOM05D006925 ORTHO05D008830 6.4e-76 288.1 208 68.3
Hma1.2p1_0157F.1_g069250 Hydrangea macrophylla HOM05D006925 ORTHO05D008830 8.4e-76 287.7 242 64.5
Lsat_1_v5_gn_7_69720 Lactuca sativa HOM05D006925 ORTHO05D008830 1.1e-75 287.3 208 69.2
Sabra03G0019700 Salix brachista HOM05D006925 ORTHO05D000812 2.4e-75 286.2 241 62.2
GSVIVG01023121001 Vitis vinifera HOM05D006925 ORTHO05D008830 3.2e-75 285.8 209 68.9
Cfa004416 Carpinus fangiana HOM05D006925 ORTHO05D008830 9.3e-75 284.3 201 70.1
Cc02_g23820 Coffea canephora HOM05D006925 ORTHO05D008830 1.2e-74 283.9 240 59.2
HanXRQChr03g0071141 Helianthus annuus HOM05D006925 ORTHO05D008830 1.6e-74 283.5 208 67.3
Potri.003G046600 Populus trichocarpa HOM05D006925 ORTHO05D008830 1.6e-74 283.5 208 69.7
TWI14G0460 Tripterygium wilfordii HOM05D006925 ORTHO05D008830 6.0e-74 281.6 207 66.7
Migut.B00701 Erythranthe guttata HOM05D006925 ORTHO05D008830 2.3e-73 279.6 210 66.7
MSTRG.16455 Avicennia marina HOM05D006925 ORTHO05D008830 3.0e-73 279.3 208 66.8
Thecc.06G062200 Theobroma cacao HOM05D006925 ORTHO05D008830 1.9e-72 276.6 207 67.6
CANSAT01G0563 Cannabis sativa HOM05D006925 ORTHO05D008830 2.5e-72 276.2 205 67.8
Duzib160G0166 Durio zibethinus HOM05D006925 ORTHO05D008830 2.5e-72 276.2 206 68.4
Actinidia00135 Actinidia chinensis HOM05D006925 ORTHO05D008830 3.3e-72 275.8 208 68.8
Sc03g0005610 Simmondsia chinensis HOM05D006925 ORTHO05D008830 7.4e-72 274.6 208 65.4
PGSC0003DMG400003436 Solanum tuberosum HOM05D006925 ORTHO05D008830 7.4e-72 274.6 207 65.7
CiPaw.05G000400 Carya illinoinensis HOM05D006925 ORTHO05D008830 1.6e-71 273.5 206 65.5
Sopen10g013620 Solanum pennellii HOM05D006925 ORTHO05D008830 2.1e-71 273.1 207 65.7
PGR042G2053 Punica granatum HOM05D006925 ORTHO05D008830 2.8e-71 272.7 206 66.5
ECA248G0237 Erigeron canadensis HOM05D002199 ORTHO05D007829 3.6e-71 272.3 193 68.4
QL02p103778 Quercus lobata HOM05D006925 ORTHO05D008830 3.6e-71 272.3 194 67.5
Solyc10g044840.2 Solanum lycopersicum HOM05D006925 ORTHO05D008830 3.6e-71 272.3 207 65.7
Eucgr.G00053 Eucalyptus grandis HOM05D006925 ORTHO05D008830 4.8e-71 271.9 193 70.5
MBI06_g17054_MAGBIO Magnolia biondii HOM05D006925 ORTHO05D008830 4.8e-71 271.9 207 65.7
Haze_09956 Corylus avellana HOM05D006925 ORTHO05D008830 6.2e-71 271.6 217 64.5
Nitab4.5_0002274g0030 Nicotiana tabacum HOM05D006925 ORTHO05D008830 1.4e-70 270.4 208 64.4
Gohir.A10G068400 Gossypium hirsutum HOM05D006925 ORTHO05D008830 5.3e-70 268.5 205 67.3
ATR1089G139 Amborella trichopoda HOM05D006925 ORTHO05D008830 6.9e-70 268.1 205 65.4
CAN.G402.4 Capsicum annuum HOM05D006925 ORTHO05D008830 6.9e-70 268.1 208 63.5
Phvul.003G090400 Phaseolus vulgaris HOM05D006925 ORTHO05D008830 9.0e-70 267.7 208 64.9
VMungo1215G1006 Vigna mungo HOM05D006925 ORTHO05D008830 9.0e-70 267.7 208 64.4
Peaxi162Scf00055g00018 Petunia axillaris HOM05D006925 ORTHO05D008830 2.0e-69 266.5 191 69.6
Gohir.D10G082800 Gossypium hirsutum HOM05D006925 ORTHO05D008830 2.6e-69 266.2 205 66.8
Gorai.011G089700 Gossypium raimondii HOM05D006925 ORTHO05D008830 2.6e-69 266.2 205 66.8
COL.COLO4_31098 Corchorus olitorius HOM05D006925 ORTHO05D008830 3.4e-69 265.8 204 64.7
THA.LOC104824095 Tarenaya hassleriana HOM05D006925 ORTHO05D008830 3.4e-69 265.8 191 68.1
A06p43640 Brassica napus HOM05D006925 ORTHO05D008830 4.5e-69 265.4 208 64.4
BraA06t27246Z Brassica rapa HOM05D006925 ORTHO05D008830 4.5e-69 265.4 208 64.4
RcHm_v2.0_Chr7g0218321 Rosa chinensis HOM05D006925 ORTHO05D008830 4.5e-69 265.4 208 63.9
Ah.02g128580 Amaranthus hybridus HOM05D006925 ORTHO05D008830 5.8e-69 265.0 207 65.2
Sp2g13680 Schrenkiella parvula HOM05D006925 ORTHO05D008830 7.6e-69 264.6 204 65.2
Aqoxy5G01835 Aquilegia oxysepala HOM05D006925 ORTHO05D008830 1.3e-68 263.8 218 61.9
Sed0012673 Sechium edule HOM05D006925 ORTHO05D008830 2.2e-68 263.1 188 68.6
DCAR_004828 Daucus carota HOM05D006925 ORTHO05D008830 2.9e-68 262.7 205 64.4
Prupe.1G587400 Prunus persica HOM05D006925 ORTHO05D008830 3.8e-68 262.3 196 65.8
FAN13G1230 Fragaria x ananassa HOM05D006925 ORTHO05D008830 4.9e-68 261.9 190 68.9
BcaC06g31233 Brassica carinata HOM05D006925 ORTHO05D008830 6.4e-68 261.5 208 63.5
ClCG10G007640 Citrullus lanatus HOM05D006925 ORTHO05D008830 8.4e-68 261.2 193 66.8
AL5G11640 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 1.1e-67 260.8 209 64.1
Thhalv10004663m.g Eutrema salsugineum HOM05D006925 ORTHO05D008830 1.1e-67 260.8 209 63.2
Lj5A307T31 Lonicera japonica HOM05D006925 ORTHO05D008830 1.4e-67 260.4 196 67.3
AUR62032491 Chenopodium quinoa HOM05D006925 ORTHO05D008830 2.4e-67 259.6 191 71.2
MD15G1445500 Malus domestica HOM05D006925 ORTHO05D008830 3.2e-67 259.2 212 62.3
arahy.Tifrunner.gnm1.ann1.EDE5FN Arachis hypogaea HOM05D006925 ORTHO05D008830 5.5e-67 258.5 201 62.2
CsaV3_3G006780 Cucumis sativus L. HOM05D006925 ORTHO05D008830 5.5e-67 258.5 185 68.6
Hund15314 Selenicereus undatus HOM05D006925 ORTHO05D008830 5.5e-67 258.5 208 65.9
BcaC06g34054 Brassica carinata HOM05D006925 ORTHO05D008830 7.1e-67 258.1 212 61.8
C07p33220 Brassica napus HOM05D006925 ORTHO05D008830 7.1e-67 258.1 212 61.8
BolC7t43833H Brassica oleracea HOM05D006925 ORTHO05D008830 7.1e-67 258.1 212 61.8
Glyma.07G271000 Glycine max HOM05D006925 ORTHO05D008830 9.3e-67 257.7 195 65.1
CDE05G0936 Ceratophyllum demersum HOM05D006925 ORTHO05D008830 3.5e-66 255.8 207 64.3
FAN08G3037 Fragaria x ananassa HOM05D006925 ORTHO05D008830 3.5e-66 255.8 185 69.2
FAN18G1352 Fragaria x ananassa HOM05D006925 ORTHO05D008830 3.5e-66 255.8 185 69.2
Lalb_Chr07g0176851 Lupinus albus HOM05D006925 ORTHO05D008830 3.5e-66 255.8 208 59.6
Lj4g0023352 Lotus japonicus HOM05D006925 ORTHO05D008830 4.6e-66 255.4 207 63.8
arahy.Tifrunner.gnm1.ann1.MTF64G Arachis hypogaea HOM05D006925 ORTHO05D008830 1.0e-65 254.2 201 61.2
FvH4_5g27220 Fragaria vesca HOM05D006925 ORTHO05D008830 1.0e-65 254.2 185 68.6
PSO210G4845 Papaver somniferum HOM05D006925 ORTHO05D008830 1.5e-64 250.4 193 66.3
Nn5g27113 Nelumbo nucifera HOM05D006925 ORTHO05D008830 8.1e-63 244.6 169 67.5
SGA_v2.0_scaffold254G45226 Striga asiatica HOM05D006925 ORTHO05D008830 9.0e-62 241.1 271 48.3
AUR62040119 Chenopodium quinoa HOM05D006925 ORTHO05D008830 7.6e-61 238.0 237 57.8
Ca_13518_v3 Cicer arietinum L. HOM05D006925 ORTHO05D008830 1.7e-60 236.9 188 63.3
Medtr4g134410 Medicago truncatula HOM05D006925 ORTHO05D008830 2.2e-60 236.5 191 61.8
MELO3C016443.2 Cucumis melo HOM05D006925 ORTHO05D008830 3.8e-60 235.7 170 67.1
Rhsim11G0114700 Rhododendron simsii HOM05D006925 ORTHO05D008830 3.8e-60 235.7 252 58.7
Aa31LG2G7670 Aethionema arabicum HOM05D006925 ORTHO05D008830 6.5e-60 235.0 201 60.2
HPP92_001204 Vanilla planifolia HOM05D006925 ORTHO05D008830 5.5e-59 231.9 185 61.1
EL10Ac6g13952 Beta vulgaris HOM05D006925 ORTHO05D008830 1.2e-58 230.7 260 51.5
Nitab4.5_0000288g0050 Nicotiana tabacum HOM05D006925 ORTHO05D008830 1.5e-56 223.8 181 62.4
TPR.G5931 Trifolium pratense HOM05D006925 ORTHO05D008830 2.5e-56 223.0 199 57.8
Carub.0005s0146 Capsella rubella HOM05D006925 ORTHO05D008830 4.3e-56 222.2 159 68.6
Psat4g001760 Pisum sativum HOM05D006925 ORTHO05D008830 4.3e-56 222.2 192 59.4
Mapoly0001s0380 Marchantia polymorpha HOM05D006925 ORTHO05D008830 9.6e-56 221.1 208 59.1
TAR628G1169 Trochodendron aralioides HOM05D006925 ORTHO05D008830 1.3e-55 220.7 180 61.7
CARHR144990 Cardamine hirsuta HOM05D006925 ORTHO05D008830 6.3e-55 218.4 195 59.5
Pp3c9_8480 Physcomitrium patens HOM05D006925 ORTHO05D008830 3.1e-54 216.1 190 55.8
Pp3c15_4340 Physcomitrium patens HOM05D006925 ORTHO05D008830 1.2e-53 214.2 190 55.3
AT2G02410 Arabidopsis thaliana HOM05D006925 ORTHO05D008830 1.2e-50 204.1 209 54.5
Zm00001eb064090 Zea mays HOM05D006925 ORTHO05D008830 4.6e-50 202.2 168 61.3
AagrBONN_evm.TU.Sc2ySwM_369.585 Anthoceros agrestis HOM05D006925 ORTHO05D008830 3.7e-47 192.6 185 54.1
SMO358G0233 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 1.4e-46 190.7 188 54.3
SEGI_06138 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 1.9e-43 180.3 202 51.0
Sabra03G0019900 Salix brachista HOM05D006925 ORTHO05D008830 6.1e-42 175.3 167 57.5
Ciclev10003645m.g Citrus clementina HOM05D006925 ORTHO05D008830 8.5e-36 154.8 129 59.7
SEGI_30664 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 1.7e-20 104.0 134 48.5
CBR_g49407 Chara braunii HOM05D000019 ORTHO05D000002 4.2e-19 99.4 122 45.9
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 1.2e-16 91.3 70 58.6
SMO201G0205 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 7.5e-16 88.6 69 58.0
Oeu016658.1 Olea europaea HOM05D006925 ORTHO05D008830 5.4e-14 82.4 84 54.8
PRCOL_00002508 Prasinoderma coloniale HOM05D006925 ORTHO05D008830 2.3e-09 67.0 102 36.3
CBR_g46374 Chara braunii HOM05D000019 ORTHO05D000353 9.8e-08 61.6 44 59.1
Os03g0843200 Oryza sativa ssp. japonica HOM05D006925 ORTHO05D008830 1.3e-07 61.2 42 64.3
TAR628G1563 Trochodendron aralioides HOM05D006925 ORTHO05D008830 3.1e-06 56.6 29 82.8
MCO01G431 Micromonas commoda HOM05D006925 ORTHO05D008830 4.1e-06 56.2 105 33.3
Glyma.17G002900 Glycine max HOM05D006925 ORTHO05D008830 9.2e-06 55.1 29 79.3


User provided reference genes

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