Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro01548 Vaccinium macrocarpon HOM05D005954 ORTHO05D007347 1.1e-81 306.6 155 100.0
Rhsim13G0191500 Rhododendron simsii HOM05D005954 ORTHO05D007347 6.2e-45 184.5 158 68.4
Dinv04624 Davidia involucrata HOM05D005954 ORTHO05D007347 5.6e-38 161.4 162 64.2
CSS0014251 Camellia sinensis var. sinensis HOM05D005954 ORTHO05D007347 3.6e-37 158.7 156 61.5
Peaxi162Scf00061g00155 Petunia axillaris HOM05D005954 ORTHO05D007347 5.4e-33 144.8 159 56.6
Cc02_g14660 Coffea canephora HOM05D005954 ORTHO05D007347 4.3e-30 135.2 159 52.8
Lsat_1_v5_gn_7_23061 Lactuca sativa HOM05D005954 ORTHO05D007347 5.6e-30 134.8 163 55.2
Solyc01g056780.3 Solanum lycopersicum HOM05D005954 ORTHO05D007347 2.1e-29 132.9 159 53.5
Sed0006910 Sechium edule HOM05D005954 ORTHO05D007347 4.8e-29 131.7 142 59.9
MELO3C007218.2 Cucumis melo HOM05D005954 ORTHO05D007347 6.2e-29 131.3 141 58.9
ClCG01G023670 Citrullus lanatus HOM05D005954 ORTHO05D007347 1.8e-28 129.8 142 58.5
PGSC0003DMG400021493 Solanum tuberosum HOM05D005954 ORTHO05D007347 2.4e-28 129.4 157 50.3
CsaV3_6G050830 Cucumis sativus L. HOM05D005954 ORTHO05D007347 5.3e-28 128.3 141 59.6
Atru.chr10.1690 Acer truncatum HOM05D005954 ORTHO05D007347 6.9e-28 127.9 162 53.1
Lj6g0020578 Lotus japonicus HOM05D005954 ORTHO05D007347 6.9e-28 127.9 155 53.5
QL05p046336 Quercus lobata HOM05D005954 ORTHO05D007347 9.0e-28 127.5 153 55.6
HanXRQChr04g0116001 Helianthus annuus HOM05D005954 ORTHO05D007347 1.5e-27 126.7 160 53.8
Nitab4.5_0000117g0150 Nicotiana tabacum HOM05D005954 ORTHO05D007347 2.0e-27 126.3 141 55.3
Nitab4.5_0004274g0040 Nicotiana tabacum HOM05D005954 ORTHO05D007347 2.0e-27 126.3 141 55.3
Nn1g09054 Nelumbo nucifera HOM05D005954 ORTHO05D007347 4.5e-27 125.2 156 53.8
Sopen01g025250 Solanum pennellii HOM05D005954 ORTHO05D007347 4.5e-27 125.2 161 50.9
Cpa.g.sc7.59 Carica papaya HOM05D005954 ORTHO05D007347 3.8e-26 122.1 142 57.7
Manes.17G054200 Manihot esculenta HOM05D005954 ORTHO05D007347 3.8e-26 122.1 139 55.4
Potri.011G064800 Populus trichocarpa HOM05D005954 ORTHO05D007347 1.1e-25 120.6 138 58.0
Haze_06257 Corylus avellana HOM05D005954 ORTHO05D007347 1.4e-25 120.2 144 54.9
PSO675G5672 Papaver somniferum HOM05D005954 ORTHO05D007347 3.2e-25 119.0 144 53.5
Ciclev10017015m.g Citrus clementina HOM05D005954 ORTHO05D007347 4.2e-25 118.6 142 55.6
FAN21G0082 Fragaria x ananassa HOM05D005954 ORTHO05D007347 4.2e-25 118.6 156 51.3
Prupe.4G059500 Prunus persica HOM05D005954 ORTHO05D007347 4.2e-25 118.6 139 53.2
AUR62036591 Chenopodium quinoa HOM05D005954 ORTHO05D007347 7.1e-25 117.9 139 54.7
RcHm_v2.0_Chr5g0010351 Rosa chinensis HOM05D005954 ORTHO05D007347 7.1e-25 117.9 138 56.5
FvH4_3g07980 Fragaria vesca HOM05D005954 ORTHO05D007347 9.3e-25 117.5 156 50.6
FAN16G0914 Fragaria x ananassa HOM05D005954 ORTHO05D007347 9.3e-25 117.5 156 50.6
GSVIVG01021193001 Vitis vinifera HOM05D005954 ORTHO05D007347 9.3e-25 117.5 106 65.1
FAN11G0799 Fragaria x ananassa HOM05D005954 ORTHO05D007347 1.2e-24 117.1 156 50.6
TWI38G2142 Tripterygium wilfordii HOM05D005954 ORTHO05D007347 1.2e-24 117.1 138 52.9
TAR626G1287 Trochodendron aralioides HOM05D005954 ORTHO05D007347 1.2e-24 117.1 157 53.5
MSTRG.14726 Avicennia marina HOM05D005954 ORTHO05D007347 1.6e-24 116.7 160 50.6
Gohir.D06G136500 Gossypium hirsutum HOM05D005954 ORTHO05D007347 1.6e-24 116.7 144 54.2
PSO541G3988 Papaver somniferum HOM05D005954 ORTHO05D007347 1.6e-24 116.7 144 53.5
Migut.H01450 Erythranthe guttata HOM05D005954 ORTHO05D007347 2.7e-24 115.9 159 49.1
CANSAT11G0094 Cannabis sativa HOM05D005954 ORTHO05D007347 4.6e-24 115.2 149 51.0
Gohir.A05G156000 Gossypium hirsutum HOM05D005954 ORTHO05D007347 4.6e-24 115.2 166 49.4
Gohir.D05G158700 Gossypium hirsutum HOM05D005954 ORTHO05D007347 4.6e-24 115.2 156 51.3
Gorai.009G163700 Gossypium raimondii HOM05D005954 ORTHO05D007347 4.6e-24 115.2 156 51.3
MD10G1282300 Malus domestica HOM05D005954 ORTHO05D007347 4.6e-24 115.2 157 51.0
Phvul.006G176900 Phaseolus vulgaris HOM05D005954 ORTHO05D007347 4.6e-24 115.2 145 52.4
Phvul.006G176980 Phaseolus vulgaris HOM05D005954 ORTHO05D007347 4.6e-24 115.2 145 52.4
Thecc.06G173000 Theobroma cacao HOM05D005954 ORTHO05D007347 6.0e-24 114.8 106 64.2
Gorai.010G158700 Gossypium raimondii HOM05D005954 ORTHO05D007347 7.9e-24 114.4 144 53.5
ECA236G0551 Erigeron canadensis HOM05D005954 ORTHO05D007347 1.0e-23 114.0 161 52.2
Gohir.A06G134004 Gossypium hirsutum HOM05D005954 ORTHO05D007347 1.0e-23 114.0 142 54.9
Ah.09g233660 Amaranthus hybridus HOM05D005954 ORTHO05D007347 1.3e-23 113.6 150 52.7
CAN.G889.12 Capsicum annuum HOM05D005954 ORTHO05D007347 1.3e-23 113.6 165 47.9
Manes.16G037400 Manihot esculenta HOM05D005954 ORTHO05D007347 1.3e-23 113.6 139 55.4
THA.LOC104820590 Tarenaya hassleriana HOM05D005954 ORTHO05D007347 1.8e-23 113.2 151 50.3
EL10Ac8g20509 Beta vulgaris HOM05D005954 ORTHO05D007347 5.1e-23 111.7 154 51.3
A08p25330 Brassica napus HOM05D005954 ORTHO05D007347 5.1e-23 111.7 140 52.9
BraA08t34485Z Brassica rapa HOM05D005954 ORTHO05D007347 5.1e-23 111.7 140 52.9
BcaNung06433 Brassica carinata HOM05D005954 ORTHO05D007347 6.7e-23 111.3 142 54.9
PGR004G0539 Punica granatum HOM05D005954 ORTHO05D007347 6.7e-23 111.3 155 49.7
PGR004G0737 Punica granatum HOM05D005954 ORTHO05D007347 6.7e-23 111.3 155 49.7
SalBow8G3893 Salvia bowleyana HOM05D005954 ORTHO05D007347 8.7e-23 110.9 158 47.5
Glyma.15G082000 Glycine max HOM05D005954 ORTHO05D007347 2.5e-22 109.4 144 51.4
BcaB07g32486 Brassica carinata HOM05D005954 ORTHO05D007347 4.3e-22 108.6 145 51.0
CiPaw.09G068600 Carya illinoinensis HOM05D005954 ORTHO05D007347 4.3e-22 108.6 148 54.7
Glyma.13G230600 Glycine max HOM05D005954 ORTHO05D007347 4.3e-22 108.6 145 51.7
A09p37340 Brassica napus HOM05D005954 ORTHO05D007347 5.7e-22 108.2 142 51.4
BraA09t39243Z Brassica rapa HOM05D005954 ORTHO05D007347 5.7e-22 108.2 142 51.4
AT1G29070 Arabidopsis thaliana HOM05D005954 ORTHO05D007347 7.4e-22 107.8 146 51.4
C03p75510 Brassica napus HOM05D005954 ORTHO05D007347 9.6e-22 107.5 143 51.7
Thhalv10008967m.g Eutrema salsugineum HOM05D005954 ORTHO05D007347 9.6e-22 107.5 142 51.4
AUR62031174 Chenopodium quinoa HOM05D005954 ORTHO05D007347 1.6e-21 106.7 138 52.9
AL1G42790 Arabidopsis lyrata HOM05D005954 ORTHO05D007347 2.8e-21 105.9 158 48.1
Duzib160G0806 Durio zibethinus HOM05D005954 ORTHO05D007347 2.8e-21 105.9 162 49.4
arahy.Tifrunner.gnm1.ann1.N07IEU Arachis hypogaea HOM05D005954 ORTHO05D007347 3.7e-21 105.5 157 49.0
Eucgr.D00519 Eucalyptus grandis HOM05D005954 ORTHO05D007347 4.8e-21 105.1 144 52.1
BolC3t19807H Brassica oleracea HOM05D005954 ORTHO05D007347 6.2e-21 104.8 157 46.5
Oeu001090.1 Olea europaea HOM05D005954 ORTHO05D007347 6.2e-21 104.8 107 59.8
BcaNung06755 Brassica carinata HOM05D005954 ORTHO05D007347 8.2e-21 104.4 143 51.0
Aa31LG5G21180 Aethionema arabicum HOM05D005954 ORTHO05D007347 1.1e-20 104.0 157 46.5
C07p16610 Brassica napus HOM05D005954 ORTHO05D007347 1.4e-20 103.6 141 50.4
Medtr2g015790 Medicago truncatula HOM05D005954 ORTHO05D007347 1.8e-20 103.2 117 56.4
Aqoxy1G03187 Aquilegia oxysepala HOM05D005954 ORTHO05D007347 2.4e-20 102.8 142 48.6
Carub.0001s2727 Capsella rubella HOM05D005954 ORTHO05D007347 2.4e-20 102.8 154 46.8
BcaC05g26922 Brassica carinata HOM05D005954 ORTHO05D007347 3.1e-20 102.4 137 52.6
C05p27750 Brassica napus HOM05D005954 ORTHO05D007347 3.1e-20 102.4 137 52.6
BolC5t31496H Brassica oleracea HOM05D005954 ORTHO05D007347 3.1e-20 102.4 137 52.6
CDE05G1458 Ceratophyllum demersum HOM05D005954 ORTHO05D007347 3.1e-20 102.4 137 54.7
COL.COLO4_31320 Corchorus olitorius HOM05D005954 ORTHO05D007347 3.1e-20 102.4 80 71.2
DCAR_007962 Daucus carota HOM05D005954 ORTHO05D007347 3.1e-20 102.4 153 47.7
CARHR028290 Cardamine hirsuta HOM05D005954 ORTHO05D007347 5.3e-20 101.7 145 50.3
Cfa000593 Carpinus fangiana HOM05D005954 ORTHO05D007347 5.3e-20 101.7 144 49.3
unitig_22.g6753 Utricularia gibba HOM05D005954 ORTHO05D007347 5.3e-20 101.7 158 46.2
Sp1g25010 Schrenkiella parvula HOM05D005954 ORTHO05D007347 6.9e-20 101.3 142 50.0
TPR.G11659 Trifolium pratense HOM05D005954 ORTHO05D007347 6.9e-20 101.3 139 48.2
SGA_v2.0_scaffold1G00032 Striga asiatica HOM05D005954 ORTHO05D007347 1.2e-19 100.5 158 48.1
MD16G1032000 Malus domestica HOM05D005954 ORTHO05D007347 2.6e-19 99.4 143 52.4
CDE02G3841 Ceratophyllum demersum HOM05D005954 ORTHO05D009675 3.4e-19 99.0 115 58.3
MD05G1303200 Malus domestica HOM05D005954 ORTHO05D007347 4.5e-19 98.6 156 48.7
Psat1g199440 Pisum sativum HOM05D005954 ORTHO05D007347 1.0e-18 97.4 140 49.3
arahy.Tifrunner.gnm1.ann1.YBYE48 Arachis hypogaea HOM05D005954 ORTHO05D007347 2.9e-18 95.9 157 47.8
Atru.chr10.1684 Acer truncatum HOM05D005954 ORTHO05D007347 6.5e-18 94.7 93 60.2
Hund23979 Selenicereus undatus HOM05D005954 ORTHO05D007347 6.5e-18 94.7 140 51.4
Sabra11G0046600 Salix brachista HOM05D005954 ORTHO05D007347 3.2e-17 92.4 83 66.3
Ca_00467_v3 Cicer arietinum L. HOM05D005954 ORTHO05D007347 4.2e-17 92.0 92 59.8
Ca_30955_v3 Cicer arietinum L. HOM05D005954 ORTHO05D007347 4.2e-17 92.0 92 59.8
MD10G1067400 Malus domestica HOM05D005954 ORTHO05D007347 4.2e-17 92.0 144 47.2
arahy.Tifrunner.gnm1.ann1.69550A Arachis hypogaea HOM05D005954 ORTHO05D007347 3.5e-16 89.0 144 47.9
Lj1P1194T69 Lonicera japonica HOM05D005954 ORTHO05D007347 4.6e-16 88.6 85 63.5
Os01g0805000 Oryza sativa ssp. japonica HOM05D005954 ORTHO05D007347 6.7e-15 84.7 90 61.1
ATR0602G014 Amborella trichopoda HOM05D005954 ORTHO05D007347 1.1e-14 84.0 100 57.0
Sc05g0007180 Simmondsia chinensis HOM05D005954 ORTHO05D007347 1.3e-13 80.5 78 62.8
CARHR028330 Cardamine hirsuta HOM05D005954 ORTHO05D007347 2.2e-13 79.7 52 75.0
BcaC06g35397 Brassica carinata HOM05D005954 ORTHO05D007347 2.8e-13 79.3 141 41.1
HPP92_016045 Vanilla planifolia HOM05D005954 ORTHO05D007347 2.8e-13 79.3 90 56.7
MBI13_g00561_MAGBIO Magnolia biondii HOM05D005954 ORTHO05D007347 4.8e-13 78.6 144 44.4
Lalb_Chr20g0121221 Lupinus albus HOM05D005954 ORTHO05D007347 1.1e-12 77.4 67 65.7
MD16G1032600 Malus domestica HOM05D005954 ORTHO05D007347 1.1e-12 77.4 128 43.8
MD16G1032400 Malus domestica HOM05D005954 ORTHO05D007347 5.3e-12 75.1 134 44.8
Zm00001eb150530 Zea mays HOM05D005954 ORTHO05D007347 1.2e-11 73.9 99 48.5
AagrBONN_evm.TU.Sc2ySwM_117.1983 Anthoceros agrestis HOM05D005954 ORTHO05D007347 4.5e-11 72.0 125 47.2
CBR_g29683 Chara braunii HOM05D005954 ORTHO05D007347 3.8e-10 68.9 134 41.8
Pp3c18_19220 Physcomitrium patens HOM05D005954 ORTHO05D007347 8.5e-10 67.8 105 52.4
Pp3c21_6450 Physcomitrium patens HOM05D005954 ORTHO05D007347 2.5e-09 66.2 137 46.0
Mapoly0043s0046 Marchantia polymorpha HOM05D005954 ORTHO05D007347 4.2e-09 65.5 65 60.0
SEGI_22528 Sequoiadendron giganteum HOM05D005954 ORTHO05D007347 1.8e-07 60.1 50 66.0
Nn3g19836 Nelumbo nucifera HOM05D005954 ORTHO05D007347 1.5e-06 57.0 44 65.9


User provided reference genes

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