Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro01545 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 3.0e-279 964.5 492 100.0
Actinidia16844 Actinidia chinensis HOM05D007729 ORTHO05D009724 7.2e-180 634.4 508 67.1
CSS0040240 Camellia sinensis var. sinensis HOM05D007729 ORTHO05D009724 6.7e-170 601.3 535 63.2
Dinv24421 Davidia involucrata HOM05D007729 ORTHO05D009724 6.7e-170 601.3 511 62.4
Hma1.2p1_1320F.1_g275420 Hydrangea macrophylla HOM05D007729 ORTHO05D009724 1.6e-163 580.1 501 61.3
vmacro05864 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 4.1e-159 565.5 334 87.7
Lj9A208G24 Lonicera japonica HOM05D007729 ORTHO05D009724 1.6e-155 553.5 492 61.4
HanXRQChr09g0268291 Helianthus annuus HOM05D007729 ORTHO05D009724 6.1e-155 551.6 501 59.1
ECA236G3528 Erigeron canadensis HOM05D007729 ORTHO05D009724 3.3e-148 529.3 498 58.6
Lsat_1_v5_gn_7_73440 Lactuca sativa HOM05D007729 ORTHO05D009724 2.1e-147 526.6 504 57.3
TAR365G0479 Trochodendron aralioides HOM05D007729 ORTHO05D009724 6.0e-142 508.4 514 57.0
Nitab4.5_0006072g0050 Nicotiana tabacum HOM05D007729 ORTHO05D009724 4.3e-140 502.3 543 54.7
Oeu053698.1 Olea europaea HOM05D007729 ORTHO05D009724 1.6e-139 500.4 513 54.8
Nitab4.5_0000368g0330 Nicotiana tabacum HOM05D007729 ORTHO05D009724 2.1e-139 500.0 519 55.5
GSVIVG01031211001 Vitis vinifera HOM05D007729 ORTHO05D009724 4.7e-139 498.8 504 54.4
Cpa.g.sc48.137 Carica papaya HOM05D007729 ORTHO05D009724 4.0e-138 495.7 517 55.1
vmacro20072 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 4.0e-138 495.7 334 79.9
DCAR_021068 Daucus carota HOM05D007729 ORTHO05D009724 6.8e-138 495.0 502 53.2
DCAR_021070 Daucus carota HOM05D007729 ORTHO05D009724 6.8e-138 495.0 502 53.2
Peaxi162Scf00673g00025 Petunia axillaris HOM05D007729 ORTHO05D009724 5.8e-137 491.9 516 55.4
Ciclev10000704m.g Citrus clementina HOM05D007729 ORTHO05D009724 1.3e-136 490.7 500 54.6
THA.LOC104805912 Tarenaya hassleriana HOM05D007729 ORTHO05D009724 1.1e-135 487.6 509 53.6
PGSC0003DMG400024735 Solanum tuberosum HOM05D007729 ORTHO05D009724 1.9e-135 486.9 507 54.0
QL03p018088 Quercus lobata HOM05D007729 ORTHO05D009724 2.4e-135 486.5 504 56.2
Migut.B00991 Erythranthe guttata HOM05D007729 ORTHO05D009724 5.4e-135 485.3 513 53.2
Solyc01g100260.4 Solanum lycopersicum HOM05D007729 ORTHO05D009724 7.0e-135 485.0 507 53.8
Potri.005G020100 Populus trichocarpa HOM05D007729 ORTHO05D009724 2.1e-134 483.4 499 54.7
Nn4g25665 Nelumbo nucifera HOM05D007729 ORTHO05D009724 6.0e-134 481.9 514 54.5
Atru.chr2.143 Acer truncatum HOM05D007729 ORTHO05D009724 7.8e-134 481.5 525 54.1
Sopen01g043770 Solanum pennellii HOM05D007729 ORTHO05D009724 1.0e-133 481.1 507 53.8
Cc02_g34750 Coffea canephora HOM05D007729 ORTHO05D009724 1.3e-133 480.7 496 54.4
FvH4_6g07160 Fragaria vesca HOM05D007729 ORTHO05D009724 3.0e-133 479.6 516 53.3
Sabra05G0026100 Salix brachista HOM05D005361 ORTHO05D006518 3.0e-133 479.6 499 54.9
SalBow7G3736 Salvia bowleyana HOM05D007729 ORTHO05D009724 3.0e-133 479.6 505 52.7
MSTRG.20396 Avicennia marina HOM05D007729 ORTHO05D009724 1.1e-132 477.6 506 53.8
Manes.09G175100 Manihot esculenta HOM05D007729 ORTHO05D009724 1.9e-132 476.9 501 53.7
A08p34750 Brassica napus HOM05D007729 ORTHO05D009724 2.5e-132 476.5 508 54.5
FAN05G4184 Fragaria x ananassa HOM05D007729 ORTHO05D009724 4.3e-132 475.7 520 52.9
BolC8t48891H Brassica oleracea HOM05D007729 ORTHO05D009724 9.5e-132 474.6 508 54.1
Carub.0001s0852 Capsella rubella HOM05D007729 ORTHO05D009724 9.5e-132 474.6 510 54.5
BraA08t35386Z Brassica rapa HOM05D007729 ORTHO05D009724 2.1e-131 473.4 508 54.1
CANSAT54G0579 Cannabis sativa HOM05D007729 ORTHO05D009724 2.1e-131 473.4 512 53.1
AL1G19670 Arabidopsis lyrata HOM05D007729 ORTHO05D009724 2.8e-131 473.0 510 53.7
Sp1g07780 Schrenkiella parvula HOM05D007729 ORTHO05D009724 3.6e-131 472.6 510 53.3
AT1G09195 Arabidopsis thaliana HOM05D007729 ORTHO05D009724 6.2e-131 471.9 508 54.3
C08p12530 Brassica napus HOM05D007729 ORTHO05D009724 1.8e-130 470.3 510 54.1
RcHm_v2.0_Chr3g0456781 Rosa chinensis HOM05D007729 ORTHO05D009724 2.3e-130 469.9 512 52.7
FAN14G4369 Fragaria x ananassa HOM05D007729 ORTHO05D009724 4.0e-130 469.2 518 52.5
CAN.G1273.5 Capsicum annuum HOM05D007729 ORTHO05D009724 9.9e-129 464.5 505 52.5
MBI18_g24956_MAGBIO Magnolia biondii HOM05D007729 ORTHO05D009724 9.9e-129 464.5 506 53.0
Thhalv10007209m.g Eutrema salsugineum HOM05D007729 ORTHO05D009724 6.4e-128 461.8 537 51.2
FAN09G4655 Fragaria x ananassa HOM05D007729 ORTHO05D009724 2.4e-127 459.9 523 51.8
Aa31LG1G6090 Aethionema arabicum HOM05D007729 ORTHO05D009724 1.6e-126 457.2 510 52.4
Duzib177G0448 Durio zibethinus HOM05D007729 ORTHO05D009724 7.8e-126 454.9 528 50.4
Haze_04087 Corylus avellana HOM05D007729 ORTHO05D009724 2.3e-125 453.4 503 53.9
Gorai.013G128200 Gossypium raimondii HOM05D007729 ORTHO05D009724 5.1e-125 452.2 500 51.8
COL.COLO4_04132 Corchorus olitorius HOM05D007729 ORTHO05D009724 6.6e-125 451.8 501 50.5
Gohir.D13G114300 Gossypium hirsutum HOM05D007729 ORTHO05D009724 6.6e-125 451.8 500 51.6
Thecc.05G320400 Theobroma cacao HOM05D007729 ORTHO05D009724 8.6e-125 451.4 501 51.7
PSO210G3025 Papaver somniferum HOM05D007729 ORTHO05D009724 4.3e-124 449.1 506 52.0
Gohir.A13G111500 Gossypium hirsutum HOM05D007729 ORTHO05D009724 1.6e-123 447.2 500 51.2
EL10Ac4g09861 Beta vulgaris HOM05D007729 ORTHO05D009724 3.1e-122 443.0 503 50.5
PSO761G0658 Papaver somniferum HOM05D007729 ORTHO05D009724 4.0e-122 442.6 507 51.9
PGR031G2787 Punica granatum HOM05D007729 ORTHO05D009724 1.5e-121 440.7 513 50.1
Lalb_Chr02g0147931 Lupinus albus HOM05D007729 ORTHO05D009724 5.8e-121 438.7 484 52.1
TWI56G1038 Tripterygium wilfordii HOM05D007729 ORTHO05D009724 8.4e-120 434.9 453 53.6
BcaC07g38483 Brassica carinata HOM05D007729 ORTHO05D009724 1.3e-112 411.0 514 49.2
SGA_v2.0_scaffold53G19323 Striga asiatica HOM05D007729 ORTHO05D009724 1.3e-112 411.0 477 48.4
AUR62000694 Chenopodium quinoa HOM05D007729 ORTHO05D009724 1.6e-107 394.0 503 46.1
CDE12G0453 Ceratophyllum demersum HOM05D007729 ORTHO05D009724 2.1e-107 393.7 495 46.3
Prupe.6G315600 Prunus persica HOM05D007729 ORTHO05D009724 9.0e-106 388.3 380 56.6
AUR62005264 Chenopodium quinoa HOM05D007729 ORTHO05D009724 8.7e-101 371.7 508 43.9
ATR0706G084 Amborella trichopoda HOM05D007729 ORTHO05D009724 3.4e-97 359.8 570 41.1
CARHR009150 Cardamine hirsuta HOM05D007729 ORTHO05D009724 2.5e-92 343.6 370 54.3
SEGI_22290 Sequoiadendron giganteum HOM05D007729 ORTHO05D009724 9.0e-90 335.1 508 40.6
Aqoxy2G02816 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 6.1e-86 322.4 362 50.0
Atru.chr2.136 Acer truncatum HOM05D007729 ORTHO05D009724 2.2e-80 303.9 297 59.6
Pp3c6_24770 Physcomitrium patens HOM05D007729 ORTHO05D009724 4.2e-79 299.7 498 38.2
Pp3c5_5230 Physcomitrium patens HOM05D007729 ORTHO05D009724 7.2e-79 298.9 503 37.2
Hund21744 Selenicereus undatus HOM05D007729 ORTHO05D009724 2.1e-78 297.4 503 39.8
Sc16g0008910 Simmondsia chinensis HOM05D007729 ORTHO05D009724 2.7e-78 297.0 345 50.1
Duzib147G0321 Durio zibethinus HOM05D007729 ORTHO05D009724 1.0e-69 268.5 362 45.9
Pp3c27_4900 Physcomitrium patens HOM05D007729 ORTHO05D009724 6.7e-69 265.8 506 35.8
PRCOL_00006313 Prasinoderma coloniale HOM05D007729 ORTHO05D009724 2.2e-59 234.2 561 32.6
Haze_25193 Corylus avellana HOM05D007729 ORTHO05D009724 9.1e-42 175.6 186 53.2
Haze_15474 Corylus avellana HOM05D000683 ORTHO05D000507 2.7e-33 147.5 122 59.8
Aqoxy2G02815 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 3.5e-33 147.1 115 67.0
CARHR009140 Cardamine hirsuta HOM05D007729 ORTHO05D009724 8.6e-32 142.5 143 54.5
MD12G1208200 Malus domestica HOM05D007729 ORTHO05D009724 4.4e-20 103.6 120 50.0
Haze_25604 Corylus avellana HOM05D007729 ORTHO05D009724 1.1e-18 99.0 123 50.4
PGSC0003DMG400033855 Solanum tuberosum HOM05D007729 ORTHO05D009724 1.9e-10 71.6 69 50.7
CBR_g1071 Chara braunii HOM05D036030 ORTHO05D009724 3.3e-07 60.8 184 32.6


User provided reference genes

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