Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro01493 Vaccinium macrocarpon HOM05D003952 ORTHO05D005083 0.0e+00 2443.3 1253 100.0
Rhsim11G0087700 Rhododendron simsii HOM05D003952 ORTHO05D005083 0.0e+00 2109.7 1220 89.3
CSS0032669 Camellia sinensis var. sinensis HOM05D003952 ORTHO05D005083 0.0e+00 1932.1 1209 82.8
CSS0017406 Camellia sinensis var. sinensis HOM05D003952 ORTHO05D005083 0.0e+00 1889.8 1209 81.6
Thecc.08G159400 Theobroma cacao HOM05D003952 ORTHO05D005083 0.0e+00 1872.1 1212 80.0
Duzib093G1052 Durio zibethinus HOM05D003952 ORTHO05D005083 0.0e+00 1859.0 1211 79.5
QL02p038017 Quercus lobata HOM05D003952 ORTHO05D005083 0.0e+00 1858.6 1209 79.3
QL02p037499 Quercus lobata HOM05D003952 ORTHO05D005083 0.0e+00 1858.2 1209 79.3
Haze_17805 Corylus avellana HOM05D003952 ORTHO05D005083 0.0e+00 1857.0 1209 79.2
Cfa018280 Carpinus fangiana HOM05D003952 ORTHO05D005083 0.0e+00 1851.3 1207 79.2
Prupe.8G040600 Prunus persica HOM05D003952 ORTHO05D005083 0.0e+00 1847.8 1209 79.9
CiPaw.15G012400 Carya illinoinensis HOM05D003952 ORTHO05D005083 0.0e+00 1833.2 1210 78.3
TAR628G1191 Trochodendron aralioides HOM05D003952 ORTHO05D005083 0.0e+00 1824.7 1209 78.7
Cc10_g15270 Coffea canephora HOM05D003952 ORTHO05D005083 0.0e+00 1822.8 1210 78.1
Potri.005G196700 Populus trichocarpa HOM05D003952 ORTHO05D005083 0.0e+00 1822.4 1208 78.2
MD10G1034200 Malus domestica HOM05D003952 ORTHO05D005083 0.0e+00 1822.0 1209 78.6
Potri.002G064400 Populus trichocarpa HOM05D003952 ORTHO05D005083 0.0e+00 1821.2 1209 78.6
Atru.chr13.2009 Acer truncatum HOM05D003952 ORTHO05D005083 0.0e+00 1819.7 1210 78.4
RcHm_v2.0_Chr6g0274251 Rosa chinensis HOM05D003952 ORTHO05D005083 0.0e+00 1817.4 1219 78.1
Gohir.D05G248000 Gossypium hirsutum HOM05D003952 ORTHO05D005083 0.0e+00 1814.3 1212 78.1
Gorai.009G258800 Gossypium raimondii HOM05D003952 ORTHO05D005083 0.0e+00 1812.0 1212 78.0
Gohir.A05G246500 Gossypium hirsutum HOM05D003952 ORTHO05D005083 0.0e+00 1810.8 1212 78.1
MD05G1033400 Malus domestica HOM05D003952 ORTHO05D005083 0.0e+00 1808.1 1209 78.2
Duzib116G0427 Durio zibethinus HOM05D003952 ORTHO05D005083 0.0e+00 1795.4 1209 77.5
FvH4_2g13030 Fragaria vesca HOM05D003952 ORTHO05D005083 0.0e+00 1794.2 1219 77.9
Sabra05G0149800 Salix brachista HOM05D003952 ORTHO05D005083 0.0e+00 1781.5 1263 74.0
FAN15G1441 Fragaria x ananassa HOM05D003952 ORTHO05D005083 0.0e+00 1780.4 1253 75.7
FAN27G2428 Fragaria x ananassa HOM05D003952 ORTHO05D005083 0.0e+00 1779.6 1257 75.4
FAN24G3461 Fragaria x ananassa HOM05D003952 ORTHO05D005083 0.0e+00 1779.2 1257 75.4
FAN20G1325 Fragaria x ananassa HOM05D003952 ORTHO05D005083 0.0e+00 1777.7 1257 75.4
Gorai.005G077100 Gossypium raimondii HOM05D003952 ORTHO05D005083 0.0e+00 1777.7 1208 77.1
Gohir.A02G062600 Gossypium hirsutum HOM05D003952 ORTHO05D005083 0.0e+00 1776.1 1208 77.2
TWI60G0338 Tripterygium wilfordii HOM05D003952 ORTHO05D005083 0.0e+00 1773.4 1209 76.2
Gohir.D02G068200 Gossypium hirsutum HOM05D003952 ORTHO05D005083 0.0e+00 1771.5 1208 76.9
TWI34G1640 Tripterygium wilfordii HOM05D003952 ORTHO05D005083 0.0e+00 1770.0 1209 76.3
Medtr1g098160 Medicago truncatula HOM05D003952 ORTHO05D005083 0.0e+00 1766.9 1210 75.9
Sabra02G0051500 Salix brachista HOM05D003952 ORTHO05D005083 0.0e+00 1766.9 1266 73.7
TWI32G0799 Tripterygium wilfordii HOM05D003952 ORTHO05D005083 0.0e+00 1761.5 1207 76.0
Eucgr.F02686 Eucalyptus grandis HOM05D003952 ORTHO05D005083 0.0e+00 1758.4 1204 75.8
Glyma.10G221500 Glycine max HOM05D003952 ORTHO05D005083 0.0e+00 1758.0 1211 75.8
VMungo0720G2354 Vigna mungo HOM05D003952 ORTHO05D005083 0.0e+00 1757.7 1232 75.0
MSTRG.24931 Avicennia marina HOM05D003952 ORTHO05D005083 0.0e+00 1753.8 1211 75.9
SalBow7G2315 Salvia bowleyana HOM05D003952 ORTHO05D005083 0.0e+00 1753.8 1216 76.2
DCAR_001164 Daucus carota HOM05D003952 ORTHO05D005083 0.0e+00 1746.5 1213 75.8
arahy.Tifrunner.gnm1.ann1.2T81X8 Arachis hypogaea HOM05D003952 ORTHO05D005083 0.0e+00 1745.3 1248 73.9
arahy.Tifrunner.gnm1.ann1.5NL3D9 Arachis hypogaea HOM05D003952 ORTHO05D005083 0.0e+00 1745.3 1248 73.9
Lalb_Chr06g0161721 Lupinus albus HOM05D003952 ORTHO05D005083 0.0e+00 1743.8 1207 75.7
arahy.Tifrunner.gnm1.ann1.AF3FG0 Arachis hypogaea HOM05D003952 ORTHO05D005083 0.0e+00 1741.1 1225 74.4
Nn008s41421 Nelumbo nucifera HOM05D003952 ORTHO05D005083 0.0e+00 1738.8 1216 74.9
Lalb_Chr02g0141571 Lupinus albus HOM05D003952 ORTHO05D005083 0.0e+00 1738.0 1211 75.4
Peaxi162Scf00360g00418 Petunia axillaris HOM05D003952 ORTHO05D005083 0.0e+00 1737.6 1211 75.6
Phvul.007G083500 Phaseolus vulgaris HOM05D003952 ORTHO05D005083 0.0e+00 1737.6 1232 74.8
arahy.Tifrunner.gnm1.ann1.SZWP5S Arachis hypogaea HOM05D003952 ORTHO05D005083 0.0e+00 1734.5 1215 74.5
PGR042G0685 Punica granatum HOM05D003952 ORTHO05D005083 0.0e+00 1734.5 1213 75.4
CANSAT25G0323 Cannabis sativa HOM05D003952 ORTHO05D005083 0.0e+00 1733.8 1209 75.9
MELO3C024067.2 Cucumis melo HOM05D003952 ORTHO05D005083 0.0e+00 1730.7 1208 74.7
Sed0012183 Sechium edule HOM05D003952 ORTHO05D005083 0.0e+00 1730.7 1207 73.8
CAN.G495.15 Capsicum annuum HOM05D003952 ORTHO05D005083 0.0e+00 1728.4 1200 75.4
CsaV3_7G024490 Cucumis sativus L. HOM05D003952 ORTHO05D005083 0.0e+00 1727.2 1208 74.3
Sc20g0003770 Simmondsia chinensis HOM05D003952 ORTHO05D005083 0.0e+00 1726.5 1209 74.4
Glyma.20G170000 Glycine max HOM05D003952 ORTHO05D005083 0.0e+00 1725.7 1210 74.5
MSTRG.22108 Avicennia marina HOM05D003952 ORTHO05D005083 0.0e+00 1722.6 1211 74.8
Lj5g0005273 Lotus japonicus HOM05D003952 ORTHO05D005083 0.0e+00 1719.1 1210 74.0
MBI04_g08946_MAGBIO Magnolia biondii HOM05D003952 ORTHO05D005083 0.0e+00 1714.1 1213 73.8
Solyc04g071990.3 Solanum lycopersicum HOM05D003952 ORTHO05D005083 0.0e+00 1712.2 1210 74.4
Nitab4.5_0000099g0200 Nicotiana tabacum HOM05D003952 ORTHO05D005083 0.0e+00 1711.0 1240 73.9
Glyma.16G163200 Glycine max HOM05D003952 ORTHO05D005083 0.0e+00 1710.3 1207 74.0
Sopen04g027970 Solanum pennellii HOM05D003952 ORTHO05D005083 0.0e+00 1710.3 1210 74.3
Oeu051283.1 Olea europaea HOM05D003952 ORTHO05D005083 0.0e+00 1709.9 1209 73.9
Ca_10663_v3 Cicer arietinum L. HOM05D003952 ORTHO05D005083 0.0e+00 1701.8 1268 71.1
Migut.N02951 Erythranthe guttata HOM05D003952 ORTHO05D005083 0.0e+00 1696.0 1216 74.4
Nn5g28824 Nelumbo nucifera HOM05D003952 ORTHO05D005083 0.0e+00 1692.9 1217 73.5
Nitab4.5_0000872g0040 Nicotiana tabacum HOM05D003952 ORTHO05D005083 0.0e+00 1689.1 1205 74.7
Solyc12g056650.2 Solanum lycopersicum HOM05D003952 ORTHO05D005083 0.0e+00 1684.8 1214 73.0
EL10Ac1g01605 Beta vulgaris HOM05D003952 ORTHO05D005083 0.0e+00 1684.5 1302 69.5
Oeu002069.1 Olea europaea HOM05D003952 ORTHO05D005083 0.0e+00 1684.5 1248 72.2
Aqoxy6G00415 Aquilegia oxysepala HOM05D003952 ORTHO05D005083 0.0e+00 1684.1 1216 72.6
CAN.G26.47 Capsicum annuum HOM05D003952 ORTHO05D005083 0.0e+00 1683.3 1214 73.2
Phvul.004G088300 Phaseolus vulgaris HOM05D003952 ORTHO05D005083 0.0e+00 1683.3 1209 73.5
SGA_v2.0_scaffold133G34641 Striga asiatica HOM05D003952 ORTHO05D005083 0.0e+00 1682.2 1213 73.8
Sopen12g029310 Solanum pennellii HOM05D003952 ORTHO05D005083 0.0e+00 1679.8 1214 72.9
CARHR023130 Cardamine hirsuta HOM05D003952 ORTHO05D005083 0.0e+00 1679.5 1213 72.9
Nitab4.5_0004270g0010 Nicotiana tabacum HOM05D003952 ORTHO05D005083 0.0e+00 1677.5 1228 72.9
ECA246G0004 Erigeron canadensis HOM05D003952 ORTHO05D005083 0.0e+00 1676.4 1212 73.0
Lj7A383T43 Lonicera japonica HOM05D003952 ORTHO05D005083 0.0e+00 1676.4 1224 73.5
THA.LOC104810466 Tarenaya hassleriana HOM05D003952 ORTHO05D005083 0.0e+00 1675.2 1216 72.5
Carub.0001s2228 Capsella rubella HOM05D003952 ORTHO05D005083 0.0e+00 1672.9 1212 72.8
TPR.G17028 Trifolium pratense HOM05D003952 ORTHO05D005083 0.0e+00 1672.1 1213 72.5
AL1G36320 Arabidopsis lyrata HOM05D003952 ORTHO05D005083 0.0e+00 1670.6 1211 72.3
Sed0019934 Sechium edule HOM05D003952 ORTHO05D005083 0.0e+00 1670.6 1211 72.4
AT1G22770 Arabidopsis thaliana HOM05D003952 ORTHO05D005083 0.0e+00 1669.4 1211 72.2
HanXRQChr11g0320211 Helianthus annuus HOM05D003952 ORTHO05D005083 0.0e+00 1669.1 1211 73.2
CsaV3_6G005020 Cucumis sativus L. HOM05D003952 ORTHO05D005083 0.0e+00 1666.0 1210 72.5
Migut.C00380 Erythranthe guttata HOM05D003952 ORTHO05D005083 0.0e+00 1666.0 1212 73.2
Nitab4.5_0005673g0010 Nicotiana tabacum HOM05D003952 ORTHO05D005083 0.0e+00 1663.7 1209 73.3
Aa31LG7G6730 Aethionema arabicum HOM05D003952 ORTHO05D005083 0.0e+00 1663.3 1220 72.6
AUR62034894 Chenopodium quinoa HOM05D003952 ORTHO05D005083 0.0e+00 1662.1 1268 70.0
Thhalv10006603m.g Eutrema salsugineum HOM05D003952 ORTHO05D005083 0.0e+00 1661.7 1217 72.6
MELO3C030034.2 Cucumis melo HOM05D003952 ORTHO05D005083 0.0e+00 1660.2 1212 72.4
Sp1g20280 Schrenkiella parvula HOM05D003952 ORTHO05D005083 0.0e+00 1659.4 1215 72.3
ClCG09G010210 Citrullus lanatus HOM05D003952 ORTHO05D005083 0.0e+00 1654.4 1188 72.6
Lsat_1_v5_gn_6_101520 Lactuca sativa HOM05D003952 ORTHO05D005083 0.0e+00 1654.0 1211 73.0
PSO170G5657 Papaver somniferum HOM05D003952 ORTHO05D005083 0.0e+00 1654.0 1218 71.3
ClCG08G007370 Citrullus lanatus HOM05D003952 ORTHO05D005083 0.0e+00 1652.5 1211 72.0
Ciclev10004044m.g Citrus clementina HOM05D003952 ORTHO05D005083 0.0e+00 1647.1 1137 75.8
Lsat_1_v5_gn_9_42181 Lactuca sativa HOM05D003952 ORTHO05D005083 0.0e+00 1637.1 1223 72.4
A09p41970 Brassica napus HOM05D003952 ORTHO05D005083 0.0e+00 1632.8 1215 71.3
Psat6g190640 Pisum sativum HOM05D003952 ORTHO05D005083 0.0e+00 1632.5 1116 76.7
C05p21880 Brassica napus HOM05D003952 ORTHO05D005083 0.0e+00 1629.4 1217 71.4
Peaxi162Scf00160g01744 Petunia axillaris HOM05D003952 ORTHO05D005083 0.0e+00 1621.3 1222 71.5
Manes.18G095000 Manihot esculenta HOM05D003952 ORTHO05D005083 0.0e+00 1613.6 1212 71.6
ATR1120G094 Amborella trichopoda HOM05D003952 ORTHO05D005083 0.0e+00 1570.8 1184 70.4
Dinv25899 Davidia involucrata HOM05D003952 ORTHO05D005083 0.0e+00 1566.6 954 84.1
Os01g0182600 Oryza sativa ssp. japonica HOM05D003952 ORTHO05D005083 0.0e+00 1555.8 1214 67.9
Zm00001eb337600 Zea mays HOM05D003952 ORTHO05D005083 0.0e+00 1541.6 1219 67.3
Zm00001eb122110 Zea mays HOM05D003952 ORTHO05D005083 0.0e+00 1536.5 1224 67.3
HPP92_008686 Vanilla planifolia HOM05D003952 ORTHO05D005083 0.0e+00 1520.4 1212 66.8
HPP92_008674 Vanilla planifolia HOM05D003952 ORTHO05D005083 0.0e+00 1515.4 1213 66.4
AUR62026637 Chenopodium quinoa HOM05D003952 ORTHO05D005083 0.0e+00 1491.9 1146 70.3
unitig_747.g21544 Utricularia gibba HOM05D003952 ORTHO05D005083 0.0e+00 1461.0 1213 65.9
CiPaw.16G008300 Carya illinoinensis HOM05D003952 ORTHO05D005083 0.0e+00 1456.8 954 78.7
COL.COLO4_13783 Corchorus olitorius HOM05D003952 ORTHO05D005083 0.0e+00 1397.5 1067 71.1
Actinidia29549 Actinidia chinensis HOM05D003952 ORTHO05D005083 0.0e+00 1392.5 983 75.7
Ah.05g168180 Amaranthus hybridus HOM05D003952 ORTHO05D005083 0.0e+00 1390.9 1216 63.5
Lalb_Chr01g0009771 Lupinus albus HOM05D003952 ORTHO05D005083 0.0e+00 1356.3 979 73.4
CSS0023419 Camellia sinensis var. sinensis HOM05D003952 ORTHO05D005083 0.0e+00 1350.5 990 74.4
Sed0012813 Sechium edule HOM05D003952 ORTHO05D005083 0.0e+00 1335.5 955 73.8
Lj4C703T11 Lonicera japonica HOM05D003952 ORTHO05D005083 0.0e+00 1280.4 990 71.0
unitig_32.g11167 Utricularia gibba HOM05D003952 ORTHO05D005083 0.0e+00 1240.3 1213 58.5
PGSC0003DMG400018791 Solanum tuberosum HOM05D003952 ORTHO05D005083 0.0e+00 1239.6 919 71.5
BcaNung06971 Brassica carinata HOM05D003952 ORTHO05D005083 0.0e+00 1186.8 812 76.0
TAR381G0458 Trochodendron aralioides HOM05D003952 ORTHO05D005083 0.0e+00 1156.7 848 73.3
Oeu022058.1 Olea europaea HOM05D003952 ORTHO05D005083 0.0e+00 1112.1 843 71.2
VMungo0464G1608 Vigna mungo HOM05D003952 ORTHO05D005083 0.0e+00 1109.7 837 71.6
SalBow6G3936 Salvia bowleyana HOM05D003952 ORTHO05D005083 0.0e+00 1079.7 1208 54.1
Hma1.2p1_0678F.1_g202015 Hydrangea macrophylla HOM05D003952 ORTHO05D005083 1.3e-297 1026.9 757 72.9
SMO367G0140 Selaginella moellendorffii HOM05D003952 ORTHO05D005083 3.6e-284 982.2 1217 47.7
Mapoly0019s0145 Marchantia polymorpha HOM05D003952 ORTHO05D005083 1.7e-281 973.4 1239 46.8
GSVIVG01001406001 Vitis vinifera HOM05D003952 ORTHO05D005083 1.8e-280 969.9 546 89.4
Cpa.g.sc26.82 Carica papaya HOM05D003952 ORTHO05D005083 2.5e-253 879.8 604 78.3
CDE04G2370 Ceratophyllum demersum HOM05D003952 ORTHO05D005083 5.8e-250 868.6 752 64.4
CDE04G1363 Ceratophyllum demersum HOM05D003952 ORTHO05D005083 1.3e-193 681.4 438 78.8
VMungo0464G1293 Vigna mungo HOM05D003952 ORTHO05D005083 2.1e-167 594.3 366 80.9
Actinidia04747 Actinidia chinensis HOM05D003952 ORTHO05D005083 2.8e-164 583.9 909 43.6
TAR381G1674 Trochodendron aralioides HOM05D003952 ORTHO05D005083 7.8e-146 522.7 313 82.4
BolC5t30883H Brassica oleracea HOM05D003952 ORTHO05D005083 5.6e-136 490.0 313 75.7
BraA09t39685Z Brassica rapa HOM05D003952 ORTHO05D005083 5.6e-136 490.0 313 75.7
Psat7g241120 Pisum sativum HOM05D002716 ORTHO05D003324 6.0e-130 469.9 624 47.0
GSVIVG01001405001 Vitis vinifera HOM05D003952 ORTHO05D005083 3.0e-113 414.5 315 71.1
AagrBONN_evm.TU.Sc2ySwM_117.1660 Anthoceros agrestis HOM05D003952 ORTHO05D005083 3.9e-113 414.1 843 34.0
CBR_g22347 Chara braunii HOM05D003952 ORTHO05D005083 2.4e-110 404.8 1297 29.1
Cpa.g.sc26.81 Carica papaya HOM05D003952 ORTHO05D005083 1.3e-100 372.5 235 77.4
Lj4A703G54 Lonicera japonica HOM05D003952 ORTHO05D005083 5.1e-89 334.0 205 81.5
CDE04G3041 Ceratophyllum demersum HOM05D003952 ORTHO05D005083 4.1e-86 324.3 512 43.8
Lsat_1_v5_gn_2_63220 Lactuca sativa HOM05D003952 ORTHO05D005083 3.2e-83 314.7 282 63.8
COL.COLO4_13782 Corchorus olitorius HOM05D003952 ORTHO05D005083 6.7e-81 307.0 190 80.0
HanXRQChr10g0278641 Helianthus annuus HOM05D003952 ORTHO05D005083 4.3e-80 304.3 203 74.4
CAN.G1225.1 Capsicum annuum HOM05D003952 ORTHO05D008201 2.0e-72 278.9 184 73.9
Lsat_1_v5_gn_8_75660 Lactuca sativa HOM05D003952 ORTHO05D005083 1.8e-70 272.3 260 60.8
Lsat_1_v5_gn_5_129380 Lactuca sativa HOM05D003952 ORTHO05D015589 1.1e-67 263.1 180 76.1
Sopen10g022170 Solanum pennellii HOM05D003952 ORTHO05D011221 2.8e-63 248.4 144 86.1
Lalb_Chr01g0009781 Lupinus albus HOM05D003952 ORTHO05D005083 1.8e-62 245.7 182 69.2
Psat5g166880 Pisum sativum HOM05D003952 ORTHO05D005083 1.1e-54 219.9 187 62.6
Lsat_1_v5_gn_3_78320 Lactuca sativa HOM05D003952 ORTHO05D005083 5.9e-53 214.2 130 85.4
CANSAT25G0696 Cannabis sativa HOM05D003952 ORTHO05D005083 5.7e-48 197.6 118 85.6
Lsat_1_v5_gn_5_64561 Lactuca sativa HOM05D003952 ORTHO05D004515 4.8e-47 194.5 125 78.4
Duzib041G0651 Durio zibethinus HOM05D003952 ORTHO05D005083 2.7e-37 162.2 92 90.2
Psat0s4455g0040 Pisum sativum HOM05D003952 ORTHO05D037363 4.3e-27 128.3 86 75.6
Psat7g010640 Pisum sativum HOM05D003952 ORTHO05D037363 4.3e-27 128.3 91 70.3
Psat7g010720 Pisum sativum HOM05D003952 ORTHO05D037363 4.3e-27 128.3 91 70.3
Psat0s2845g0120 Pisum sativum HOM05D004054 ORTHO05D004945 2.3e-20 105.9 78 71.8
Nn3g20398 Nelumbo nucifera HOM05D003952 ORTHO05D005083 8.6e-20 104.0 83 66.3
TPR.G25241 Trifolium pratense HOM05D003952 ORTHO05D048898 2.3e-17 95.9 59 76.3
Lsat_1_v5_gn_7_62680 Lactuca sativa HOM05D003952 ORTHO05D015589 1.5e-16 93.2 47 85.1
Lsat_1_v5_gn_3_73081 Lactuca sativa HOM05D003952 ORTHO05D015589 7.5e-16 90.9 46 82.6
Lsat_1_v5_gn_5_15721 Lactuca sativa HOM05D001610 ORTHO05D001585 9.2e-14 84.0 139 41.7
PGSC0003DMG400001110 Solanum tuberosum HOM05D003952 ORTHO05D005083 2.3e-12 79.3 76 52.6


User provided reference genes

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