Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro01486 Vaccinium macrocarpon HOM05D006436 ORTHO05D008011 9.2e-61 237.3 176 100.0
Rhsim11G0087100 Rhododendron simsii HOM05D006436 ORTHO05D008011 2.3e-56 222.6 176 92.0
CSS0031788 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 2.4e-53 212.6 174 86.2
HanXRQChr10g0309911 Helianthus annuus HOM05D006436 ORTHO05D008011 7.0e-53 211.1 174 85.6
Hma1.2p1_0158F.1_g069740 Hydrangea macrophylla HOM05D006436 ORTHO05D008011 5.9e-52 208.0 174 86.2
Lj4C253G7 Lonicera japonica HOM05D006436 ORTHO05D008011 3.9e-51 205.3 174 85.1
GSVIVG01035239001 Vitis vinifera HOM05D006436 ORTHO05D008011 3.9e-51 205.3 174 85.6
Cc07_g12850 Coffea canephora HOM05D006436 ORTHO05D008011 1.5e-50 203.4 174 83.9
FvH4_5g27560 Fragaria vesca HOM05D006436 ORTHO05D008011 2.5e-50 202.6 174 83.3
Oeu012529.1 Olea europaea HOM05D006436 ORTHO05D008011 3.3e-50 202.2 174 84.5
ECA234G4304 Erigeron canadensis HOM05D006436 ORTHO05D008011 7.3e-50 201.1 174 78.2
Eucgr.J01642 Eucalyptus grandis HOM05D006436 ORTHO05D008011 7.3e-50 201.1 174 79.3
Manes.02G134600 Manihot esculenta HOM05D006436 ORTHO05D008011 7.3e-50 201.1 175 60.0
QL08p017466 Quercus lobata HOM05D006436 ORTHO05D008011 7.3e-50 201.1 174 75.3
FAN18G1736 Fragaria x ananassa HOM05D006436 ORTHO05D008011 9.5e-50 200.7 174 82.8
LjContig00141g0009494 Lotus japonicus HOM05D006436 ORTHO05D008011 9.5e-50 200.7 174 81.6
Potri.001G225300 Populus trichocarpa HOM05D006436 ORTHO05D008011 9.5e-50 200.7 174 83.9
Peaxi162Scf00442g00063 Petunia axillaris HOM05D006436 ORTHO05D008011 1.2e-49 200.3 174 81.0
THA.LOC104823829 Tarenaya hassleriana HOM05D006436 ORTHO05D008011 1.2e-49 200.3 174 80.5
RcHm_v2.0_Chr7g0218931 Rosa chinensis HOM05D006436 ORTHO05D008011 1.6e-49 199.9 174 81.6
Ciclev10022503m.g Citrus clementina HOM05D006436 ORTHO05D008011 2.8e-49 199.1 174 81.0
TAR365G0111 Trochodendron aralioides HOM05D006436 ORTHO05D008011 2.8e-49 199.1 174 82.2
Nitab4.5_0005193g0010 Nicotiana tabacum HOM05D006436 ORTHO05D008011 3.6e-49 198.7 174 81.6
Atru.chr1.2057 Acer truncatum HOM05D006436 ORTHO05D008011 4.7e-49 198.4 174 80.5
FAN08G3413 Fragaria x ananassa HOM05D006436 ORTHO05D008011 4.7e-49 198.4 174 59.8
Ca_05765_v3 Cicer arietinum L. HOM05D006436 ORTHO05D008011 6.2e-49 198.0 174 79.3
Solyc04g014610.4 Solanum lycopersicum HOM05D006436 ORTHO05D008011 6.2e-49 198.0 174 81.6
Sopen04g006750 Solanum pennellii HOM05D006436 ORTHO05D008011 6.2e-49 198.0 174 81.6
CiPaw.03G076800 Carya illinoinensis HOM05D006436 ORTHO05D008011 8.0e-49 197.6 174 83.3
Lsat_1_v5_gn_5_79100 Lactuca sativa HOM05D006436 ORTHO05D008011 8.0e-49 197.6 174 83.9
CAN.G268.8 Capsicum annuum HOM05D006436 ORTHO05D008011 1.1e-48 197.2 174 81.0
Thecc.09G311900 Theobroma cacao HOM05D006436 ORTHO05D008011 1.1e-48 197.2 174 81.6
MSTRG.12143 Avicennia marina HOM05D006436 ORTHO05D008011 1.4e-48 196.8 174 85.6
Ca_18506_v3 Cicer arietinum L. HOM05D006436 ORTHO05D008011 1.4e-48 196.8 174 78.7
PGSC0003DMG400024110 Solanum tuberosum HOM05D006436 ORTHO05D008011 1.4e-48 196.8 174 81.0
Psat2g043120 Pisum sativum HOM05D006436 ORTHO05D008011 1.8e-48 196.4 174 80.5
Medtr5g077040 Medicago truncatula HOM05D006436 ORTHO05D008011 2.3e-48 196.1 174 81.6
MBI18_g05914_MAGBIO Magnolia biondii HOM05D006436 ORTHO05D008011 4.0e-48 195.3 175 76.6
Cpa.g.sc178.16 Carica papaya HOM05D006436 ORTHO05D008011 5.2e-48 194.9 174 80.5
Solyc04g071330.4 Solanum lycopersicum HOM05D006436 ORTHO05D008011 5.2e-48 194.9 174 81.0
Sopen04g027290 Solanum pennellii HOM05D006436 ORTHO05D008011 5.2e-48 194.9 174 80.5
Dinv19074 Davidia involucrata HOM05D006436 ORTHO05D008011 1.2e-47 193.7 174 82.2
PGR042G2272 Punica granatum HOM05D006436 ORTHO05D008011 1.2e-47 193.7 174 81.0
arahy.Tifrunner.gnm1.ann1.1G92VG Arachis hypogaea HOM05D006436 ORTHO05D008011 1.5e-47 193.4 174 79.3
arahy.Tifrunner.gnm1.ann1.QIUU4Q Arachis hypogaea HOM05D006436 ORTHO05D008011 1.5e-47 193.4 174 77.0
AT5G37290 Arabidopsis thaliana HOM05D006436 ORTHO05D008011 2.0e-47 193.0 176 77.8
Lalb_Chr16g0392121 Lupinus albus HOM05D006436 ORTHO05D008011 2.0e-47 193.0 174 79.3
arahy.Tifrunner.gnm1.ann1.RB24L7 Arachis hypogaea HOM05D006436 ORTHO05D008011 2.6e-47 192.6 174 76.4
Prupe.3G143200 Prunus persica HOM05D006436 ORTHO05D008011 2.6e-47 192.6 175 81.7
arahy.Tifrunner.gnm1.ann1.7TMM1B Arachis hypogaea HOM05D006436 ORTHO05D008011 5.8e-47 191.4 174 73.6
Thhalv10027956m.g Eutrema salsugineum HOM05D006436 ORTHO05D008011 1.3e-46 190.3 176 81.2
Oeu039710.1 Olea europaea HOM05D006436 ORTHO05D008011 2.9e-46 189.1 174 81.0
Aqoxy7G01157 Aquilegia oxysepala HOM05D006436 ORTHO05D008011 3.7e-46 188.7 174 75.9
AL7G45650 Arabidopsis lyrata HOM05D006436 ORTHO05D008011 3.7e-46 188.7 176 81.2
Glyma.14G210900 Glycine max HOM05D006436 ORTHO05D008011 3.7e-46 188.7 174 78.2
Gohir.D07G105500 Gossypium hirsutum HOM05D006436 ORTHO05D008011 3.7e-46 188.7 174 79.3
Gorai.001G113600 Gossypium raimondii HOM05D006436 ORTHO05D008011 3.7e-46 188.7 174 79.3
Phvul.008G233200 Phaseolus vulgaris HOM05D006436 ORTHO05D008011 4.9e-46 188.3 174 75.9
CARHR215800 Cardamine hirsuta HOM05D006436 ORTHO05D008011 8.3e-46 187.6 176 79.5
MELO3C025074.2 Cucumis melo HOM05D006436 ORTHO05D008011 8.3e-46 187.6 174 81.6
Gohir.A07G101500 Gossypium hirsutum HOM05D006436 ORTHO05D008011 8.3e-46 187.6 174 79.3
MD09G1253300 Malus domestica HOM05D006436 ORTHO05D008011 8.3e-46 187.6 177 77.4
VMungo0647G0400 Vigna mungo HOM05D006436 ORTHO05D008011 1.4e-45 186.8 174 76.4
Sp1g30670 Schrenkiella parvula HOM05D006436 ORTHO05D008011 2.4e-45 186.0 176 79.5
CsaV3_5G020600 Cucumis sativus L. HOM05D006436 ORTHO05D008011 4.1e-45 185.3 174 80.5
TWI77G0906 Tripterygium wilfordii HOM05D006436 ORTHO05D008011 4.1e-45 185.3 177 74.0
Carub.0007s3240 Capsella rubella HOM05D006436 ORTHO05D008011 9.2e-45 184.1 176 76.7
ATR0706G244 Amborella trichopoda HOM05D006436 ORTHO05D008011 1.2e-44 183.7 174 78.7
FAN18G0548 Fragaria x ananassa HOM05D006436 ORTHO05D008011 2.7e-44 182.6 197 51.3
CANSAT80G1957 Cannabis sativa HOM05D006436 ORTHO05D008011 3.5e-44 182.2 174 78.7
Sed0003659 Sechium edule HOM05D006436 ORTHO05D008011 4.6e-44 181.8 174 79.3
Carub.0007s3243 Capsella rubella HOM05D006436 ORTHO05D008011 6.0e-44 181.4 176 75.6
HPP92_004857 Vanilla planifolia HOM05D006436 ORTHO05D008011 6.0e-44 181.4 174 78.2
BcaB03g13643 Brassica carinata HOM05D006436 ORTHO05D008011 6.6e-43 177.9 176 76.7
Migut.A01047 Erythranthe guttata HOM05D006436 ORTHO05D008011 6.6e-43 177.9 174 77.0
Zm00001eb188680 Zea mays HOM05D006436 ORTHO05D008011 8.6e-43 177.6 174 76.4
BcaC01g04932 Brassica carinata HOM05D006436 ORTHO05D008011 4.3e-42 175.3 175 76.6
Os11g0546200 Oryza sativa ssp. japonica HOM05D006436 ORTHO05D008011 5.6e-42 174.9 174 73.6
PSO063G3804 Papaver somniferum HOM05D006436 ORTHO05D008011 9.5e-42 174.1 173 75.1
BraA03t11880Z Brassica rapa HOM05D006436 ORTHO05D008011 1.6e-41 173.3 176 54.5
Cfa007759 Carpinus fangiana HOM05D006436 ORTHO05D008011 2.1e-41 172.9 174 54.6
unitig_61.g26181 Utricularia gibba HOM05D006436 ORTHO05D008011 3.6e-41 172.2 191 48.7
C03p31970 Brassica napus HOM05D006436 ORTHO05D008011 6.2e-41 171.4 176 54.0
BolC3t15539H Brassica oleracea HOM05D006436 ORTHO05D008011 6.2e-41 171.4 176 54.0
Sc15g0000210 Simmondsia chinensis HOM05D006436 ORTHO05D008011 3.1e-40 169.1 175 52.6
Sabra16G0133900 Salix brachista HOM05D006436 ORTHO05D008011 4.0e-40 168.7 247 42.5
FvH4_5g26310 Fragaria vesca HOM05D006436 ORTHO05D008011 9.9e-39 164.1 179 50.8
COL.COLO4_18608 Corchorus olitorius HOM05D006436 ORTHO05D008011 2.2e-38 162.9 154 81.2
SGA_v2.0_scaffold24G10269 Striga asiatica HOM05D006436 ORTHO05D008011 1.1e-37 160.6 204 59.3
SalBow6G7138 Salvia bowleyana HOM05D006436 ORTHO05D008011 1.4e-37 160.2 174 75.3
Dinv28234 Davidia involucrata HOM05D006436 ORTHO05D008011 4.1e-37 158.7 145 85.5
Aa31LG5G11620 Aethionema arabicum HOM05D006436 ORTHO05D008011 7.8e-36 154.5 192 68.2
FAN13G2473 Fragaria x ananassa HOM05D006436 ORTHO05D008011 1.7e-35 153.3 170 50.0
Nitab4.5_0000574g0240 Nicotiana tabacum HOM05D006436 ORTHO05D008011 1.7e-35 153.3 84 83.3
Hund24464 Selenicereus undatus HOM05D006436 ORTHO05D008011 8.6e-35 151.0 175 46.3
SMO347G0032 Selaginella moellendorffii HOM05D006436 ORTHO05D008011 5.6e-34 148.3 174 43.1
SEGI_01802 Sequoiadendron giganteum HOM05D006436 ORTHO05D008011 8.1e-33 144.4 84 79.8
Cc00_g04020 Coffea canephora HOM05D006436 ORTHO05D008011 1.4e-32 143.7 173 49.7
Duzib168G0581 Durio zibethinus HOM05D006436 ORTHO05D008011 1.4e-32 143.7 84 82.1
Mapoly0028s0068 Marchantia polymorpha HOM05D006436 ORTHO05D008011 6.8e-32 141.4 174 44.3
AUR62026126 Chenopodium quinoa HOM05D006436 ORTHO05D008011 1.2e-31 140.6 85 77.6
EL10Ac5g11211 Beta vulgaris HOM05D006436 ORTHO05D008011 2.6e-31 139.4 84 78.6
AUR62026125 Chenopodium quinoa HOM05D003339 ORTHO05D003847 4.4e-31 138.7 85 76.5
DCAR_006063 Daucus carota HOM05D006436 ORTHO05D008011 4.4e-31 138.7 138 79.0
PGSC0003DMG400023565 Solanum tuberosum HOM05D006436 ORTHO05D008011 7.6e-31 137.9 174 47.1
AUR62028451 Chenopodium quinoa HOM05D003339 ORTHO05D003847 2.2e-30 136.3 84 76.2
Ah.14g085550 Amaranthus hybridus HOM05D000477 ORTHO05D000338 6.4e-30 134.8 83 78.3
AUR62028452 Chenopodium quinoa HOM05D006436 ORTHO05D008011 2.4e-29 132.9 83 77.1
Nitab4.5_0012165g0010 Nicotiana tabacum HOM05D006436 ORTHO05D008011 5.4e-29 131.7 138 79.0
CDE11G1230 Ceratophyllum demersum HOM05D006436 ORTHO05D008011 9.2e-29 131.0 138 66.7
ClCG01G008580 Citrullus lanatus HOM05D006436 ORTHO05D008011 7.8e-28 127.9 138 77.5
CSS0035006 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 6.6e-27 124.8 123 74.8
AagrBONN_evm.TU.Sc2ySwM_368.3316 Anthoceros agrestis HOM05D006436 ORTHO05D008011 9.6e-26 120.9 84 66.7
CSS0025543 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 9.3e-21 104.4 165 41.2
arahy.Tifrunner.gnm1.ann1.8KE236 Arachis hypogaea HOM05D006436 ORTHO05D008011 6.0e-20 101.7 213 35.7
Haze_14313 Corylus avellana HOM05D006436 ORTHO05D008011 7.8e-20 101.3 119 48.7
Thhalv10028339m.g Eutrema salsugineum HOM05D006436 ORTHO05D008011 1.1e-18 97.4 126 43.7
Nn4g25693 Nelumbo nucifera HOM05D006436 ORTHO05D008011 2.1e-17 93.2 118 46.6
CBR_g12236 Chara braunii HOM05D006436 ORTHO05D008011 1.9e-10 70.1 114 35.1
Nitab4.5_0011078g0020 Nicotiana tabacum HOM05D006436 ORTHO05D008011 1.4e-08 63.9 36 80.6
QL03p022571 Quercus lobata HOM05D006436 ORTHO05D008011 1.8e-08 63.5 36 80.6
CAN.G935.5 Capsicum annuum HOM05D006436 ORTHO05D008011 2.0e-07 60.1 36 77.8
Thecc.05G304200 Theobroma cacao HOM05D006436 ORTHO05D008011 2.6e-07 59.7 42 69.0
Nitab4.5_0011078g0030 Nicotiana tabacum HOM05D006436 ORTHO05D008011 4.5e-07 58.9 36 72.2
CsaV3_1G031100 Cucumis sativus L. HOM05D006436 ORTHO05D008011 3.8e-06 55.8 42 61.9


User provided reference genes

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