Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro01467 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 8.3e-28 127.1 109 100.0
Rhsim11G0084300 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.0e-18 95.9 109 78.9
Rhsim11G0084400 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.7e-18 95.5 109 75.2
Rhsim11G0084700 Rhododendron simsii HOM05D002879 ORTHO05D002930 5.0e-17 91.3 109 73.4
Rhsim11G0084500 Rhododendron simsii HOM05D002879 ORTHO05D002930 8.6e-17 90.5 109 59.6
Rhsim11G0084800 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.3e-14 82.4 66 72.7
Rhsim11G0084600 Rhododendron simsii HOM05D002879 ORTHO05D002930 4.0e-14 81.6 66 72.7
Actinidia29536 Actinidia chinensis HOM05D002879 ORTHO05D002930 3.5e-10 68.6 60 51.7
AUR62040595 Chenopodium quinoa HOM05D002879 ORTHO05D002930 4.6e-10 68.2 61 54.1
CAN.G264.1 Capsicum annuum HOM05D002879 ORTHO05D002930 1.0e-09 67.0 45 66.7
AUR62026685 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.0e-09 67.0 66 50.0
EL10Ac1g01576 Beta vulgaris HOM05D002879 ORTHO05D002930 1.7e-09 66.2 62 54.8
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 1.7e-09 66.2 46 60.9
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.7e-09 66.2 45 64.4
Ah.05g168050 Amaranthus hybridus HOM05D002879 ORTHO05D002930 2.3e-09 65.9 46 67.4
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 2.3e-09 65.9 45 64.4
Solyc04g071580.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 3.0e-09 65.5 45 64.4
vmacro23421 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 3.0e-09 65.5 48 60.4
Haze_17772 Corylus avellana HOM05D002879 ORTHO05D002930 3.9e-09 65.1 61 49.2
PGSC0003DMG400024093 Solanum tuberosum HOM05D002879 ORTHO05D002930 3.9e-09 65.1 45 64.4
Solyc04g071610.4 Solanum lycopersicum HOM05D002879 ORTHO05D002930 6.6e-09 64.3 45 60.0
Sopen04g027590 Solanum pennellii HOM05D002879 ORTHO05D002930 6.6e-09 64.3 45 60.0
CAN.G264.3 Capsicum annuum HOM05D002879 ORTHO05D002930 8.6e-09 63.9 45 60.0
Rhsim11G0084100 Rhododendron simsii HOM05D000132 ORTHO05D000058 1.1e-08 63.5 45 75.6
Sopen04g027560 Solanum pennellii HOM05D002879 ORTHO05D002930 1.1e-08 63.5 45 62.2
PGSC0003DMG400006662 Solanum tuberosum HOM05D002879 ORTHO05D002930 1.5e-08 63.2 45 60.0
Peaxi162Scf00599g00009 Petunia axillaris HOM05D002879 ORTHO05D002930 1.9e-08 62.8 45 57.8
CAN.G264.2 Capsicum annuum HOM05D002879 ORTHO05D002930 2.5e-08 62.4 45 57.8
Migut.C00983 Erythranthe guttata HOM05D002879 ORTHO05D002930 2.5e-08 62.4 43 65.1
PGSC0003DMG400006663 Solanum tuberosum HOM05D002879 ORTHO05D002930 2.5e-08 62.4 66 43.9
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 2.5e-08 62.4 43 67.4
Migut.N01983 Erythranthe guttata HOM05D002879 ORTHO05D002930 3.3e-08 62.0 43 65.1
Solyc04g071600.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 4.3e-08 61.6 66 43.9
Nitab4.5_0001187g0070 Nicotiana tabacum HOM05D002879 ORTHO05D002930 5.6e-08 61.2 45 55.6
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 5.6e-08 61.2 44 63.6
Migut.I00192 Erythranthe guttata HOM05D002879 ORTHO05D002930 7.3e-08 60.8 43 62.8
Potri.005G193901 Populus trichocarpa HOM05D002879 ORTHO05D002930 7.3e-08 60.8 65 47.7
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 9.5e-08 60.5 44 61.4
Nitab4.5_0002764g0050 Nicotiana tabacum HOM05D002879 ORTHO05D002930 9.5e-08 60.5 45 55.6
Peaxi162Scf00599g00115 Petunia axillaris HOM05D002879 ORTHO05D002930 9.5e-08 60.5 45 55.6
Solyc04g071590.3 Solanum lycopersicum HOM05D002879 ORTHO05D002930 9.5e-08 60.5 45 57.8
Sopen04g027570 Solanum pennellii HOM05D002879 ORTHO05D002930 9.5e-08 60.5 45 57.8
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 9.5e-08 60.5 44 63.6
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 9.5e-08 60.5 44 63.6
Actinidia29538 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.2e-07 60.1 45 60.0
MBI09_g23868_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 1.2e-07 60.1 59 50.8
Actinidia04759 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.6e-07 59.7 44 63.6
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 1.6e-07 59.7 44 59.1
Hund26690 Selenicereus undatus HOM05D002879 ORTHO05D002930 2.1e-07 59.3 43 58.1
Peaxi162Scf01294g00118 Petunia axillaris HOM05D002879 ORTHO05D002930 2.8e-07 58.9 43 62.8
PGSC0003DMG400006661 Solanum tuberosum HOM05D002879 ORTHO05D002930 2.8e-07 58.9 43 60.5
Migut.C00982 Erythranthe guttata HOM05D002879 ORTHO05D002930 3.6e-07 58.5 43 60.5
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 3.6e-07 58.5 44 59.1
Os02g0543000 Oryza sativa ssp. japonica HOM05D002879 ORTHO05D002930 3.6e-07 58.5 43 60.5
Sopen04g027580 Solanum pennellii HOM05D002879 ORTHO05D002930 4.7e-07 58.2 64 43.8
arahy.Tifrunner.gnm1.ann1.4DJY3R Arachis hypogaea HOM05D002879 ORTHO05D002930 6.2e-07 57.8 44 59.1
arahy.Tifrunner.gnm1.ann1.MV46JJ Arachis hypogaea HOM05D002879 ORTHO05D002930 6.2e-07 57.8 44 59.1
EL10Ac1g01570 Beta vulgaris HOM05D002879 ORTHO05D002930 6.2e-07 57.8 43 58.1
CSS0043717 Camellia sinensis var. sinensis HOM05D002879 ORTHO05D002930 6.2e-07 57.8 43 62.8
vmacro01468 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 6.2e-07 57.8 51 54.9
Rhsim11G0085000 Rhododendron simsii HOM05D002879 ORTHO05D002930 8.0e-07 57.4 44 59.1
MBI09_g20569_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 1.1e-06 57.0 60 55.0
MBI09_g23867_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 1.1e-06 57.0 60 55.0
Potri.005G193800 Populus trichocarpa HOM05D002879 ORTHO05D002930 1.1e-06 57.0 47 53.2
Rhsim11G0084900 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.1e-06 57.0 114 62.3
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 1.4e-06 56.6 44 56.8
EL10Ac1g01577 Beta vulgaris HOM05D002879 ORTHO05D002930 2.3e-06 55.8 44 54.5
Hund17173 Selenicereus undatus HOM05D002879 ORTHO05D002930 2.3e-06 55.8 62 46.8
vmacro01469 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.3e-06 55.8 43 60.5
Migut.N02014 Erythranthe guttata HOM05D002879 ORTHO05D002930 3.1e-06 55.5 40 62.5
Eucgr.E02063 Eucalyptus grandis HOM05D002879 ORTHO05D002930 4.0e-06 55.1 44 65.9
Zm00001eb131500 Zea mays HOM05D036376 ORTHO05D002930 5.2e-06 54.7 63 54.0
Ah.05g168060 Amaranthus hybridus HOM05D002879 ORTHO05D002930 6.8e-06 54.3 42 57.1
AUR62026683 Chenopodium quinoa HOM05D002879 ORTHO05D002930 6.8e-06 54.3 43 69.8
Lj5g0010855 Lotus japonicus HOM05D002879 ORTHO05D002930 6.8e-06 54.3 44 54.5
Rhsim11G0084200 Rhododendron simsii HOM05D002879 ORTHO05D002930 6.8e-06 54.3 43 58.1
Hund26910 Selenicereus undatus HOM05D002879 ORTHO05D002930 6.8e-06 54.3 44 56.8
Sc26g0002520 Simmondsia chinensis HOM05D002879 ORTHO05D002930 6.8e-06 54.3 43 55.8
Sc26g0002530 Simmondsia chinensis HOM05D002879 ORTHO05D002930 6.8e-06 54.3 43 55.8
FAN24G2761 Fragaria x ananassa HOM05D002879 ORTHO05D002930 8.9e-06 53.9 44 65.9


User provided reference genes

Program Settings