Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro01461 Vaccinium macrocarpon HOM05D005556 ORTHO05D006304 1.6e-126 456.1 222 100.0
vmacro05715 Vaccinium macrocarpon HOM05D005556 ORTHO05D006304 1.3e-24 117.5 116 61.2
vmacro01911 Vaccinium macrocarpon HOM05D005556 ORTHO05D006304 6.6e-24 115.2 152 50.0
CSS0007132 Camellia sinensis var. sinensis HOM05D005556 ORTHO05D006304 7.3e-23 111.7 158 45.6
CSS0048948 Camellia sinensis var. sinensis HOM05D005556 ORTHO05D006304 7.3e-23 111.7 158 45.6
Actinidia02420 Actinidia chinensis HOM05D005556 ORTHO05D006304 2.8e-22 109.8 156 47.4
Dinv09497 Davidia involucrata HOM05D005556 ORTHO05D006304 2.8e-22 109.8 165 46.1
Oeu059877.1 Olea europaea HOM05D005556 ORTHO05D006304 3.6e-22 109.4 158 44.9
Gohir.A12G031200 Gossypium hirsutum HOM05D005556 ORTHO05D006304 8.1e-22 108.2 114 56.1
Gohir.D12G041100 Gossypium hirsutum HOM05D005556 ORTHO05D006304 8.1e-22 108.2 158 46.8
Gorai.008G042900 Gossypium raimondii HOM05D005556 ORTHO05D006304 8.1e-22 108.2 158 46.8
GSVIVG01036958001 Vitis vinifera HOM05D005556 ORTHO05D006304 8.1e-22 108.2 114 55.3
Cc02_g20430 Coffea canephora HOM05D005556 ORTHO05D006304 2.4e-21 106.7 156 44.9
Hma1.2p1_0435F.1_g152480 Hydrangea macrophylla HOM05D005556 ORTHO05D006304 2.4e-21 106.7 157 45.9
FAN27G0195 Fragaria x ananassa HOM05D005556 ORTHO05D006304 3.1e-21 106.3 158 46.8
RcHm_v2.0_Chr6g0246091 Rosa chinensis HOM05D005556 ORTHO05D006304 3.1e-21 106.3 159 46.5
FAN15G0833 Fragaria x ananassa HOM05D005556 ORTHO05D006304 4.0e-21 105.9 158 44.3
FAN24G1262 Fragaria x ananassa HOM05D005556 ORTHO05D006304 4.0e-21 105.9 158 46.8
Prupe.8G157600 Prunus persica HOM05D005556 ORTHO05D006304 4.0e-21 105.9 158 46.8
COL.COLO4_17842 Corchorus olitorius HOM05D005556 ORTHO05D006304 5.2e-21 105.5 158 45.6
Ah.01g024290 Amaranthus hybridus HOM05D005556 ORTHO05D006304 6.9e-21 105.1 158 42.4
Potri.009G081300 Populus trichocarpa HOM05D005556 ORTHO05D006304 6.9e-21 105.1 114 56.1
Cfa004765 Carpinus fangiana HOM05D005556 ORTHO05D006304 8.9e-21 104.8 156 47.4
MD05G1113100 Malus domestica HOM05D005556 ORTHO05D006304 8.9e-21 104.8 158 46.2
Hund06487 Selenicereus undatus HOM05D005556 ORTHO05D006304 1.2e-20 104.4 158 42.4
Thecc.02G035400 Theobroma cacao HOM05D005556 ORTHO05D006304 1.2e-20 104.4 114 56.1
TWI23G1245 Tripterygium wilfordii HOM05D005556 ORTHO05D006304 1.2e-20 104.4 116 55.2
MELO3C018576.2 Cucumis melo HOM05D005556 ORTHO05D006304 1.5e-20 104.0 114 50.9
CsaV3_7G007220 Cucumis sativus L. HOM05D005556 ORTHO05D006304 1.5e-20 104.0 114 51.8
Lj5A224G46 Lonicera japonica HOM05D005556 ORTHO05D006304 1.5e-20 104.0 121 52.9
ClCG02G007540 Citrullus lanatus HOM05D005556 ORTHO05D006304 2.0e-20 103.6 114 53.5
Nn5g29135 Nelumbo nucifera HOM05D005556 ORTHO05D006304 2.6e-20 103.2 121 52.1
Manes.07G048500 Manihot esculenta HOM05D005556 ORTHO05D006304 3.4e-20 102.8 158 44.9
QL11p027090 Quercus lobata HOM05D005556 ORTHO05D006304 4.4e-20 102.4 113 55.8
Ciclev10028842m.g Citrus clementina HOM05D005556 ORTHO05D006304 5.8e-20 102.1 154 43.5
Duzib132G0943 Durio zibethinus HOM05D005556 ORTHO05D006304 5.8e-20 102.1 159 45.9
Medtr4g092750 Medicago truncatula HOM05D005556 ORTHO05D006304 5.8e-20 102.1 119 50.4
DCAR_021917 Daucus carota HOM05D005556 ORTHO05D006304 7.6e-20 101.7 156 46.2
ECA240G4430 Erigeron canadensis HOM05D005556 ORTHO05D006304 7.6e-20 101.7 114 51.8
FAN20G2516 Fragaria x ananassa HOM05D005556 ORTHO05D006304 7.6e-20 101.7 178 42.1
SGA_v2.0_scaffold342G49419 Striga asiatica HOM05D005556 ORTHO05D006304 7.6e-20 101.7 114 53.5
Migut.B00506 Erythranthe guttata HOM05D005556 ORTHO05D006304 9.9e-20 101.3 114 50.0
Eucgr.G01120 Eucalyptus grandis HOM05D005556 ORTHO05D006304 9.9e-20 101.3 119 53.8
Lj4g0008817 Lotus japonicus HOM05D005556 ORTHO05D006304 9.9e-20 101.3 117 50.4
Sabra16G0179600 Salix brachista HOM05D005556 ORTHO05D006304 9.9e-20 101.3 158 45.6
Carub.0007s0675 Capsella rubella HOM05D005556 ORTHO05D006304 1.3e-19 100.9 114 51.8
Peaxi162Scf00299g00339 Petunia axillaris HOM05D005556 ORTHO05D006304 1.3e-19 100.9 147 45.6
PGSC0003DMG400003102 Solanum tuberosum HOM05D005556 ORTHO05D006304 1.3e-19 100.9 158 42.4
TPR.G16873 Trifolium pratense HOM05D005556 ORTHO05D006304 1.3e-19 100.9 114 50.0
AUR62027065 Chenopodium quinoa HOM05D005556 ORTHO05D006304 2.2e-19 100.1 158 41.8
AUR62030906 Chenopodium quinoa HOM05D005556 ORTHO05D006304 2.2e-19 100.1 158 41.1
Potri.001G287100 Populus trichocarpa HOM05D005556 ORTHO05D006304 2.2e-19 100.1 114 53.5
Glyma.08G064100 Glycine max HOM05D005556 ORTHO05D006304 2.9e-19 99.8 112 51.8
TAR628G0311 Trochodendron aralioides HOM05D005556 ORTHO05D006304 2.9e-19 99.8 114 52.6
AT4G33670 Arabidopsis thaliana HOM05D005556 ORTHO05D006304 3.8e-19 99.4 114 50.0
A03p62160 Brassica napus HOM05D005556 ORTHO05D006304 3.8e-19 99.4 126 46.8
CANSAT25G0859 Cannabis sativa HOM05D005556 ORTHO05D006304 3.8e-19 99.4 114 55.3
CiPaw.06G161400 Carya illinoinensis HOM05D005556 ORTHO05D006304 3.8e-19 99.4 155 43.2
Haze_10362 Corylus avellana HOM05D005556 ORTHO05D006304 3.8e-19 99.4 150 42.7
PGR042G0433 Punica granatum HOM05D005556 ORTHO05D006304 3.8e-19 99.4 114 50.0
MSTRG.16652 Avicennia marina HOM05D005556 ORTHO05D006304 4.9e-19 99.0 114 51.8
Lalb_Chr09g0327041 Lupinus albus HOM05D005556 ORTHO05D006304 4.9e-19 99.0 112 52.7
Phvul.002G216600 Phaseolus vulgaris HOM05D005556 ORTHO05D006304 4.9e-19 99.0 112 49.1
Rhsim11G0145300 Rhododendron simsii HOM05D005556 ORTHO05D006304 4.9e-19 99.0 185 40.5
CAN.G504.63 Capsicum annuum HOM05D005556 ORTHO05D006304 8.4e-19 98.2 156 41.7
Thhalv10025723m.g Eutrema salsugineum HOM05D005556 ORTHO05D006304 8.4e-19 98.2 114 50.0
HanXRQChr09g0250811 Helianthus annuus HOM05D005556 ORTHO05D006304 8.4e-19 98.2 112 48.2
arahy.Tifrunner.gnm1.ann1.ASR1GR Arachis hypogaea HOM05D005556 ORTHO05D006304 1.1e-18 97.8 158 41.1
BraA03t15255Z Brassica rapa HOM05D005556 ORTHO05D006304 1.1e-18 97.8 114 49.1
CARHR241760 Cardamine hirsuta HOM05D005556 ORTHO05D006304 1.4e-18 97.4 114 52.6
Ca_18422_v3 Cicer arietinum L. HOM05D005556 ORTHO05D006304 1.4e-18 97.4 114 48.2
Nitab4.5_0012619g0020 Nicotiana tabacum HOM05D005556 ORTHO05D006304 1.4e-18 97.4 158 41.8
Solyc01g106450.3 Solanum lycopersicum HOM05D005556 ORTHO05D006304 1.4e-18 97.4 158 41.1
BcaNung02190 Brassica carinata HOM05D005556 ORTHO05D006304 1.9e-18 97.1 114 49.1
C07p59820 Brassica napus HOM05D005556 ORTHO05D006304 1.9e-18 97.1 114 48.2
BolC7t46427H Brassica oleracea HOM05D005556 ORTHO05D006304 1.9e-18 97.1 114 48.2
Ca_18437_v3 Cicer arietinum L. HOM05D005556 ORTHO05D006304 1.9e-18 97.1 131 47.3
Aqoxy6G00609 Aquilegia oxysepala HOM05D005556 ORTHO05D006304 2.4e-18 96.7 111 54.1
Nitab4.5_0001477g0210 Nicotiana tabacum HOM05D005556 ORTHO05D006304 2.4e-18 96.7 114 48.2
unitig_21.g20707 Utricularia gibba HOM05D005556 ORTHO05D006304 2.4e-18 96.7 158 40.5
VMungo0251G3662 Vigna mungo HOM05D005556 ORTHO05D006304 2.4e-18 96.7 112 49.1
arahy.Tifrunner.gnm1.ann1.GBZ5J5 Arachis hypogaea HOM05D005556 ORTHO05D006304 4.2e-18 95.9 158 40.5
MBI16_g35805_MAGBIO Magnolia biondii HOM05D005556 ORTHO05D006304 4.2e-18 95.9 158 42.4
EL10Ac9g22141 Beta vulgaris HOM05D005556 ORTHO05D006304 5.4e-18 95.5 158 44.3
Aa31sc730G30 Aethionema arabicum HOM05D005556 ORTHO05D006304 7.1e-18 95.1 126 45.2
Sp7g31400 Schrenkiella parvula HOM05D005556 ORTHO05D006304 9.3e-18 94.7 126 45.2
C03p86470 Brassica napus HOM05D005556 ORTHO05D006304 1.2e-17 94.4 155 40.0
BolC3t20939H Brassica oleracea HOM05D002023 ORTHO05D002049 1.2e-17 94.4 155 40.0
PSO210G4879 Papaver somniferum HOM05D005556 ORTHO05D006304 1.2e-17 94.4 114 52.6
COL.COLO4_17843 Corchorus olitorius HOM05D005556 ORTHO05D006304 2.1e-17 93.6 160 41.9
Sopen01g048820 Solanum pennellii HOM05D005556 ORTHO05D006304 2.7e-17 93.2 158 39.9
AL7G17810 Arabidopsis lyrata HOM05D005556 ORTHO05D006304 3.5e-17 92.8 114 47.4
Hma1.2p1_0435F.1_g152490 Hydrangea macrophylla HOM05D005556 ORTHO05D006304 4.6e-17 92.4 107 52.3
AUR62013157 Chenopodium quinoa HOM05D005556 ORTHO05D006304 1.0e-16 91.3 152 39.5
PSO761G0683 Papaver somniferum HOM05D005556 ORTHO05D006304 1.0e-16 91.3 114 50.9
THA.LOC104807192 Tarenaya hassleriana HOM05D005556 ORTHO05D006304 1.3e-16 90.9 160 41.9
BcaB03g12782 Brassica carinata HOM05D005556 ORTHO05D006304 1.7e-16 90.5 122 45.1
Os12g0482700 Oryza sativa ssp. japonica HOM05D005556 ORTHO05D006304 1.7e-16 90.5 158 39.9
BraA08t33702Z Brassica rapa HOM05D002023 ORTHO05D002049 2.3e-16 90.1 110 46.4
A08p17470 Brassica napus HOM05D005556 ORTHO05D006304 3.0e-16 89.7 114 43.9
Lsat_1_v5_gn_9_114260 Lactuca sativa HOM05D005556 ORTHO05D006304 3.0e-16 89.7 111 48.6
Zm00001eb408730 Zea mays HOM05D005556 ORTHO05D006304 1.5e-15 87.4 114 46.5
Sc08g0004230 Simmondsia chinensis HOM05D005556 ORTHO05D006304 3.3e-15 86.3 106 50.0
CDE04G2170 Ceratophyllum demersum HOM05D005556 ORTHO05D006304 2.8e-14 83.2 110 48.2
Thhalv10026635m.g Eutrema salsugineum HOM05D005556 ORTHO05D006304 2.8e-14 83.2 107 49.5
SMO164G0219 Selaginella moellendorffii HOM05D005556 ORTHO05D006304 1.1e-13 81.3 109 43.1
ATR0767G112 Amborella trichopoda HOM05D005556 ORTHO05D006304 4.5e-12 75.9 113 46.0
CDE06G0801 Ceratophyllum demersum HOM05D005556 ORTHO05D006304 7.6e-12 75.1 99 42.4
vmacro09856 Vaccinium macrocarpon HOM05D002353 ORTHO05D002461 7.6e-12 75.1 50 68.0
SMO164G0102 Selaginella moellendorffii HOM05D005556 ORTHO05D006304 1.3e-11 74.3 110 38.2
Pp3c7_4940 Physcomitrium patens HOM05D005556 ORTHO05D006304 8.4e-11 71.6 115 40.0
MD10G1115600 Malus domestica HOM05D005556 ORTHO05D006304 1.4e-10 70.9 107 44.9
Mapoly0002s0285 Marchantia polymorpha HOM05D005556 ORTHO05D006304 3.2e-10 69.7 114 40.4
Rhsim09G0196600 Rhododendron simsii HOM05D002353 ORTHO05D002461 9.3e-10 68.2 50 62.0
SHI04909 Sapria himalayana HOM05D005556 ORTHO05D006304 1.6e-09 67.4 100 45.0
HPP92_007724 Vanilla planifolia HOM05D005556 ORTHO05D006304 2.1e-09 67.0 146 38.4
Pp3c1_9660 Physcomitrium patens HOM05D005556 ORTHO05D006304 7.9e-09 65.1 113 37.2
vmacro05713 Vaccinium macrocarpon HOM05D064215 ORTHO05D426632 1.5e-07 60.8 30 80.0
Atru.BG.46.p Acer truncatum HOM05D005556 ORTHO05D006304 7.4e-07 58.5 71 47.9
Dinv16044 Davidia involucrata HOM05D005556 ORTHO05D006304 7.4e-07 58.5 72 48.6
vmacro20270 Vaccinium macrocarpon HOM05D005556 ORTHO05D006304 9.6e-07 58.2 27 92.6
AagrBONN_evm.TU.Sc2ySwM_228.863 Anthoceros agrestis HOM05D005556 ORTHO05D006304 1.3e-06 57.8 108 36.1
SalBow6G1008 Salvia bowleyana HOM05D005556 ORTHO05D006304 1.3e-06 57.8 89 46.1
CSS0001839 Camellia sinensis var. sinensis HOM05D002353 ORTHO05D002461 2.1e-06 57.0 45 57.8
Psat7g103600 Pisum sativum HOM05D005556 ORTHO05D006304 2.1e-06 57.0 27 88.9
Manes.10G090900 Manihot esculenta HOM05D005556 ORTHO05D006304 2.8e-06 56.6 27 88.9
Cpa.g.sc20.62 Carica papaya HOM05D005556 ORTHO05D006304 4.8e-06 55.8 125 36.8
FvH4_2g02330 Fragaria vesca HOM05D005556 ORTHO05D006304 4.8e-06 55.8 25 96.0
Sed0016178 Sechium edule HOM05D005556 ORTHO05D006304 4.8e-06 55.8 43 60.5
BcaC01g00970 Brassica carinata HOM05D005556 ORTHO05D006304 6.2e-06 55.5 44 61.4
SEGI_28357 Sequoiadendron giganteum HOM05D005556 ORTHO05D006304 6.2e-06 55.5 102 37.3


User provided reference genes

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