Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro01410 Vaccinium macrocarpon HOM05D006456 ORTHO05D007588 8.5e-117 423.7 218 100.0
Rhsim12G0086900 Rhododendron simsii HOM05D006456 ORTHO05D007588 2.2e-96 355.9 221 84.2
CSS0027890 Camellia sinensis var. sinensis HOM05D006456 ORTHO05D007588 1.3e-80 303.5 222 71.6
Dinv31583 Davidia involucrata HOM05D006456 ORTHO05D007588 6.0e-70 268.1 221 63.8
GSVIVG01011822001 Vitis vinifera HOM05D006456 ORTHO05D007588 2.5e-68 262.7 219 65.3
TAR629G3159 Trochodendron aralioides HOM05D006456 ORTHO05D007588 9.6e-68 260.8 219 63.9
QL01p003354 Quercus lobata HOM05D006456 ORTHO05D007588 8.1e-67 257.7 224 62.5
CiPaw.06G016000 Carya illinoinensis HOM05D006456 ORTHO05D007588 1.1e-66 257.3 221 62.9
Prupe.1G318000 Prunus persica HOM05D006456 ORTHO05D007588 6.9e-66 254.6 221 61.5
Haze_00665 Corylus avellana HOM05D006456 ORTHO05D007588 4.5e-65 251.9 217 62.7
CiPaw.05G243600 Carya illinoinensis HOM05D006456 ORTHO05D007588 9.9e-65 250.8 224 61.6
Oeu027684.2 Olea europaea HOM05D006456 ORTHO05D007588 4.9e-64 248.4 226 61.5
Nn4g23975 Nelumbo nucifera HOM05D006456 ORTHO05D007588 8.4e-64 247.7 221 62.9
Oeu014300.2 Olea europaea HOM05D006456 ORTHO05D007588 1.9e-63 246.5 226 60.6
MD13G1034500 Malus domestica HOM05D006456 ORTHO05D007588 2.7e-62 242.7 219 59.8
CANSAT01G2803 Cannabis sativa HOM05D006456 ORTHO05D007588 7.9e-62 241.1 224 58.5
Nitab4.5_0001999g0020 Nicotiana tabacum HOM05D006456 ORTHO05D007588 7.9e-62 241.1 224 58.9
Solyc03g013030.3 Solanum lycopersicum HOM05D006456 ORTHO05D007588 2.3e-61 239.6 227 58.6
Sopen03g020360 Solanum pennellii HOM05D006456 ORTHO05D007588 3.0e-61 239.2 227 59.0
CAN.G99.9 Capsicum annuum HOM05D006456 ORTHO05D007588 3.9e-61 238.8 224 59.8
Manes.06G064100 Manihot esculenta HOM05D006456 ORTHO05D007588 1.1e-60 237.3 225 58.7
MD16G1036000 Malus domestica HOM05D006456 ORTHO05D007588 1.5e-60 236.9 215 60.5
Gohir.D05G316500 Gossypium hirsutum HOM05D006456 ORTHO05D007588 6.2e-59 231.5 222 57.7
Gorai.009G338700 Gossypium raimondii HOM05D006456 ORTHO05D007588 6.2e-59 231.5 222 57.7
Gohir.A05G315000 Gossypium hirsutum HOM05D006456 ORTHO05D007588 1.8e-58 229.9 222 57.7
Thecc.02G220100 Theobroma cacao HOM05D006456 ORTHO05D007588 3.1e-58 229.2 218 58.7
Duzib248G0017 Durio zibethinus HOM05D006456 ORTHO05D007588 4.0e-58 228.8 225 57.8
MSTRG.2210 Avicennia marina HOM05D006456 ORTHO05D007588 3.8e-56 222.2 226 55.3
TWI75G0343 Tripterygium wilfordii HOM05D006456 ORTHO05D007588 1.1e-55 220.7 221 55.2
Hund25025 Selenicereus undatus HOM05D006456 ORTHO05D007588 4.2e-55 218.8 222 54.5
ClCG05G022400 Citrullus lanatus HOM05D006456 ORTHO05D007588 1.6e-54 216.9 227 57.7
Glyma.10G269500 Glycine max HOM05D006456 ORTHO05D007588 2.7e-54 216.1 224 54.5
Glyma.20G121600 Glycine max HOM05D006456 ORTHO05D007588 4.6e-54 215.3 223 55.6
Sc11g0003890 Simmondsia chinensis HOM05D006456 ORTHO05D007588 3.0e-53 212.6 268 47.8
SGA_v2.0_scaffold170G38812 Striga asiatica HOM05D006456 ORTHO05D007588 3.9e-53 212.2 241 52.3
Sed0027511 Sechium edule HOM05D006456 ORTHO05D007588 6.7e-53 211.5 228 56.6
Cc11_g09550 Coffea canephora HOM05D006456 ORTHO05D007588 1.1e-52 210.7 227 54.6
Lsat_1_v5_gn_3_56960 Lactuca sativa HOM05D006456 ORTHO05D007588 4.3e-52 208.8 224 54.9
DCAR_007270 Daucus carota HOM05D006456 ORTHO05D007588 5.6e-52 208.4 221 53.8
CsaV3_5G034690 Cucumis sativus L. HOM05D006456 ORTHO05D007588 1.3e-51 207.2 225 56.0
Aa31sc140G50 Aethionema arabicum HOM05D006456 ORTHO05D007588 3.7e-51 205.7 226 53.1
MELO3C012283.2 Cucumis melo HOM05D006456 ORTHO05D007588 1.4e-50 203.8 227 55.1
HanXRQChr15g0477811 Helianthus annuus HOM05D006456 ORTHO05D007588 2.4e-50 203.0 220 52.7
FAN17G0635 Fragaria x ananassa HOM05D006456 ORTHO05D007588 2.0e-49 199.9 221 53.8
FAN12G2031 Fragaria x ananassa HOM05D006456 ORTHO05D007588 2.6e-49 199.5 227 52.4
FvH4_4g26560 Fragaria vesca HOM05D006456 ORTHO05D007588 3.4e-49 199.1 220 51.4
Aqoxy3G00186 Aquilegia oxysepala HOM05D006456 ORTHO05D007588 5.8e-49 198.4 218 54.6
AT1G68185 Arabidopsis thaliana HOM05D006456 ORTHO05D007588 7.6e-49 198.0 222 51.8
PGR119G2311 Punica granatum HOM05D006456 ORTHO05D007588 1.3e-48 197.2 228 49.1
FAN12G0878 Fragaria x ananassa HOM05D006456 ORTHO05D007588 1.7e-48 196.8 227 52.0
Phvul.007G033000 Phaseolus vulgaris HOM05D006456 ORTHO05D007588 1.7e-48 196.8 215 52.1
FAN07G1047 Fragaria x ananassa HOM05D006456 ORTHO05D008764 2.2e-48 196.4 227 52.4
FAN22G1705 Fragaria x ananassa HOM05D006456 ORTHO05D007588 2.2e-48 196.4 227 51.5
Lj5g0005162 Lotus japonicus HOM05D006456 ORTHO05D007588 2.9e-48 196.1 220 51.4
C06p37830 Brassica napus HOM05D006456 ORTHO05D007588 4.9e-48 195.3 224 52.2
Lalb_Chr17g0338791 Lupinus albus HOM05D006456 ORTHO05D007588 6.5e-48 194.9 221 49.3
Potri.010G118900 Populus trichocarpa HOM05D006456 ORTHO05D007588 6.5e-48 194.9 231 52.8
Atru.chr11.273 Acer truncatum HOM05D006456 ORTHO05D007588 1.1e-47 194.1 226 52.2
BcaC08g45988 Brassica carinata HOM05D006456 ORTHO05D007588 1.1e-47 194.1 226 51.3
unitig_52.g17127 Utricularia gibba HOM05D006456 ORTHO05D007588 1.1e-47 194.1 229 51.5
BcaB03g15404 Brassica carinata HOM05D006456 ORTHO05D007588 4.2e-47 192.2 215 52.6
THA.LOC104801669 Tarenaya hassleriana HOM05D006456 ORTHO05D007588 3.5e-46 189.1 223 49.8
CDE07G1334 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 4.6e-46 188.7 217 49.8
Lalb_Chr10g0096361 Lupinus albus HOM05D006456 ORTHO05D007588 4.6e-46 188.7 222 49.1
PSO017G1436 Papaver somniferum HOM05D006456 ORTHO05D007588 4.6e-46 188.7 217 55.8
MBI16_g14292_MAGBIO Magnolia biondii HOM05D006456 ORTHO05D007588 6.0e-46 188.3 222 49.1
PSO478G4574 Papaver somniferum HOM05D006456 ORTHO05D007588 7.9e-46 188.0 218 54.6
A07p32110 Brassica napus HOM05D006456 ORTHO05D007588 1.0e-45 187.6 225 49.8
ECA246G1061 Erigeron canadensis HOM05D006456 ORTHO05D007588 1.0e-45 187.6 219 52.1
Carub.0002s1467 Capsella rubella HOM05D006456 ORTHO05D007588 1.8e-45 186.8 223 51.6
Ca_11124_v3 Cicer arietinum L. HOM05D006456 ORTHO05D007588 1.8e-45 186.8 223 51.1
Peaxi162Scf00520g00114 Petunia axillaris HOM05D006456 ORTHO05D007588 3.0e-45 186.0 180 58.3
Cpa.g.sc65.75 Carica papaya HOM05D006456 ORTHO05D007588 5.1e-45 185.3 198 54.5
PGSC0003DMG400010378 Solanum tuberosum HOM05D006456 ORTHO05D007588 5.1e-45 185.3 188 55.9
CARHR060870 Cardamine hirsuta HOM05D006456 ORTHO05D007588 1.1e-44 184.1 219 52.5
Thhalv10019127m.g Eutrema salsugineum HOM05D006456 ORTHO05D007588 1.1e-44 184.1 219 51.1
Medtr1g109370 Medicago truncatula HOM05D006456 ORTHO05D007588 1.1e-44 184.1 225 51.1
arahy.Tifrunner.gnm1.ann1.UW2YW6 Arachis hypogaea HOM05D006456 ORTHO05D007588 1.5e-44 183.7 217 53.0
TPR.G4830 Trifolium pratense HOM05D006456 ORTHO05D007588 2.5e-44 183.0 231 47.6
AL2G27020 Arabidopsis lyrata HOM05D006456 ORTHO05D007588 4.3e-44 182.2 219 49.3
Ciclev10016584m.g Citrus clementina HOM05D006456 ORTHO05D007588 5.7e-44 181.8 227 51.1
Psat6g223800 Pisum sativum HOM05D006456 ORTHO05D007588 7.4e-44 181.4 225 49.8
HanXRQChr17g0556631 Helianthus annuus HOM05D006456 ORTHO05D007588 1.3e-43 180.6 222 45.9
Sp5g23190 Schrenkiella parvula HOM05D006456 ORTHO05D007588 4.8e-43 178.7 239 47.7
Atru.chr11.288 Acer truncatum HOM05D006456 ORTHO05D007588 1.2e-41 174.1 225 48.0
AUR62002792 Chenopodium quinoa HOM05D006456 ORTHO05D007588 1.2e-41 174.1 226 49.1
RcHm_v2.0_Chr4g0434211 Rosa chinensis HOM05D006456 ORTHO05D007588 3.8e-40 169.1 219 47.9
ATR0053G055 Amborella trichopoda HOM05D006456 ORTHO05D007588 5.0e-40 168.7 219 45.2
Sed0026587 Sechium edule HOM05D006456 ORTHO05D007588 3.2e-39 166.0 166 60.2
Ah.02g128170 Amaranthus hybridus HOM05D006456 ORTHO05D007588 5.5e-39 165.2 226 44.2
AUR62014103 Chenopodium quinoa HOM05D006456 ORTHO05D007588 6.1e-38 161.8 225 45.8
Nitab4.5_0012897g0010 Nicotiana tabacum HOM05D006456 ORTHO05D007588 1.3e-37 160.6 176 54.0
CsaV3_5G006740 Cucumis sativus L. HOM05D006456 ORTHO05D007588 1.9e-36 156.8 236 48.7
Lj6P752T19 Lonicera japonica HOM05D006456 ORTHO05D007588 1.9e-36 156.8 127 65.4
EL10Ac6g14282 Beta vulgaris HOM05D006456 ORTHO05D007588 1.4e-34 150.6 221 40.7
arahy.Tifrunner.gnm1.ann1.WCM1NC Arachis hypogaea HOM05D006456 ORTHO05D007588 1.8e-34 150.2 236 46.6
Sabra10G0089400 Salix brachista HOM05D006456 ORTHO05D007588 1.8e-34 150.2 324 37.7
HPP92_004876 Vanilla planifolia HOM05D006456 ORTHO05D007588 4.1e-34 149.1 228 44.7
HPP92_004850 Vanilla planifolia HOM05D006456 ORTHO05D007588 9.1e-34 147.9 228 44.7
VMungo0720G1166 Vigna mungo HOM05D006456 ORTHO05D007588 4.5e-33 145.6 215 43.7
Migut.E00381 Erythranthe guttata HOM05D006456 ORTHO05D007588 2.1e-30 136.7 129 56.6
Eucgr.G02230 Eucalyptus grandis HOM05D006456 ORTHO05D007588 2.7e-30 136.3 133 57.9
Zm00001eb357890 Zea mays HOM05D006456 ORTHO05D007588 3.6e-30 136.0 220 42.7
Os01g0607300 Oryza sativa ssp. japonica HOM05D006456 ORTHO05D007588 2.8e-27 126.3 220 38.2
BolC6t38884H Brassica oleracea HOM05D006456 ORTHO05D007588 3.4e-25 119.4 112 57.1
HanXRQChr17g0556611 Helianthus annuus HOM05D006456 ORTHO05D007588 2.2e-24 116.7 128 50.8
BraA07t30839Z Brassica rapa HOM05D006456 ORTHO05D007588 1.1e-23 114.4 112 56.2
Actinidia31998 Actinidia chinensis HOM05D006456 ORTHO05D007588 3.2e-23 112.8 82 68.3
CDE06G0604 Ceratophyllum demersum HOM05D006456 ORTHO05D007588 1.3e-19 100.9 109 52.3
Pp3c2_12120 Physcomitrium patens HOM05D006456 ORTHO05D007588 1.0e-16 91.3 234 29.5
Mapoly0066s0083 Marchantia polymorpha HOM05D006456 ORTHO05D007588 3.8e-16 89.4 224 33.0
SHI16262 Sapria himalayana HOM05D006456 ORTHO05D007588 5.5e-15 85.5 196 36.2
COL.COLO4_36793 Corchorus olitorius HOM05D006456 ORTHO05D007588 9.4e-15 84.7 53 73.6
BolC6t38885H Brassica oleracea HOM05D006456 ORTHO05D007588 4.0e-13 79.3 97 48.5
Pp3c14_19600 Physcomitrium patens HOM05D006456 ORTHO05D007588 6.7e-13 78.6 239 28.9
BraA07t30840Z Brassica rapa HOM05D006456 ORTHO05D007588 3.3e-12 76.3 91 47.3
SHI16259 Sapria himalayana HOM05D006456 ORTHO05D007588 7.7e-09 65.1 49 65.3
CBR_g17172 Chara braunii HOM05D006456 ORTHO05D007588 3.8e-08 62.8 80 41.2
SEGI_26799 Sequoiadendron giganteum HOM05D006456 ORTHO05D007588 3.2e-07 59.7 99 37.4
Actinidia38361 Actinidia chinensis HOM05D000279 ORTHO05D000957 5.5e-07 58.9 38 65.8
Thhalv10015519m.g Eutrema salsugineum HOM05D000984 ORTHO05D001096 5.5e-07 58.9 78 41.0


User provided reference genes

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