Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro01370 Vaccinium macrocarpon HOM05D000414 ORTHO05D000276 1.7e-26 121.7 52 100.0
TAR371G0732 Trochodendron aralioides HOM05D000414 ORTHO05D000276 3.7e-18 94.0 49 83.7
Cpa.g.sc1.197 Carica papaya HOM05D000414 ORTHO05D000276 2.0e-16 88.2 49 77.6
CiPaw.16G004400 Carya illinoinensis HOM05D000414 ORTHO05D000276 2.0e-08 61.6 120 33.3
Dinv04486 Davidia involucrata HOM05D000414 ORTHO05D000276 2.7e-08 61.2 120 34.2
Cfa018615 Carpinus fangiana HOM05D000414 ORTHO05D000276 7.7e-08 59.7 120 33.3
Haze_17454 Corylus avellana HOM05D000414 ORTHO05D000276 1.3e-07 58.9 120 33.3
Duzib251G0813 Durio zibethinus HOM05D000414 ORTHO05D000276 1.3e-07 58.9 120 31.7
MBI12_g02431_MAGBIO Magnolia biondii HOM05D000414 ORTHO05D000276 1.3e-07 58.9 120 28.3
Oeu042051.1 Olea europaea HOM05D000414 ORTHO05D000276 1.3e-07 58.9 118 33.1
Nn4g23785 Nelumbo nucifera HOM05D000414 ORTHO05D000276 2.9e-07 57.8 120 33.3
Aqoxy3G03938 Aquilegia oxysepala HOM05D000414 ORTHO05D000276 5.0e-07 57.0 48 50.0
Aa31sc179G20 Aethionema arabicum HOM05D000414 ORTHO05D000276 6.5e-07 56.6 23 100.0
Ciclev10033938m.g Citrus clementina HOM05D000414 ORTHO05D000276 6.5e-07 56.6 23 100.0
Potri.010G127700 Populus trichocarpa HOM05D000414 ORTHO05D000276 6.5e-07 56.6 23 100.0
Sabra10G0097100 Salix brachista HOM05D000414 ORTHO05D000276 6.5e-07 56.6 23 100.0
AL2G27530 Arabidopsis lyrata HOM05D000414 ORTHO05D000276 8.5e-07 56.2 23 95.7
AT1G68610 Arabidopsis thaliana HOM05D000414 ORTHO05D000276 8.5e-07 56.2 23 95.7
Carub.0002s1515 Capsella rubella HOM05D000414 ORTHO05D000276 8.5e-07 56.2 23 95.7
Migut.L01086 Erythranthe guttata HOM05D000414 ORTHO05D000276 8.5e-07 56.2 23 95.7
Thhalv10019246m.g Eutrema salsugineum HOM05D000414 ORTHO05D000276 8.5e-07 56.2 23 95.7
PGR119G2002 Punica granatum HOM05D000414 ORTHO05D000276 8.5e-07 56.2 23 95.7
Solyc07g020965.1 Solanum lycopersicum HOM05D000414 ORTHO05D000276 8.5e-07 56.2 39 51.3
THA.LOC104804875 Tarenaya hassleriana HOM05D000414 ORTHO05D000276 8.5e-07 56.2 23 95.7
CSS0043237 Camellia sinensis var. sinensis HOM05D000414 ORTHO05D000276 1.9e-06 55.1 23 95.7
CARHR061410 Cardamine hirsuta HOM05D000414 ORTHO05D000276 1.9e-06 55.1 23 95.7
Cpa.g.sc2.230 Carica papaya HOM05D000414 ORTHO05D000276 1.9e-06 55.1 23 95.7
Prupe.1G307600 Prunus persica HOM05D000414 ORTHO05D000276 1.9e-06 55.1 23 95.7
Cpa.g.sc2.225 Carica papaya HOM05D000414 ORTHO05D000276 2.5e-06 54.7 23 91.3
Cpa.g.sc2.228 Carica papaya HOM05D000414 ORTHO05D000276 2.5e-06 54.7 23 91.3
AUR62036165 Chenopodium quinoa HOM05D000414 ORTHO05D000276 2.5e-06 54.7 23 91.3
QL01p044414 Quercus lobata HOM05D000414 ORTHO05D000276 2.5e-06 54.7 23 91.3
SGA_v2.0_scaffold124G33564 Striga asiatica HOM05D000414 ORTHO05D000276 2.5e-06 54.7 23 91.3
Eucgr.G02339 Eucalyptus grandis HOM05D000414 ORTHO05D000276 3.2e-06 54.3 37 59.5
Sp5g23710 Schrenkiella parvula HOM05D000414 ORTHO05D000276 3.2e-06 54.3 23 95.7
Thecc.02G358400 Theobroma cacao HOM05D000414 ORTHO05D000276 4.2e-06 53.9 23 91.3
TWI75G1806 Tripterygium wilfordii HOM05D000414 ORTHO05D000276 4.2e-06 53.9 23 91.3
BcaB03g15835 Brassica carinata HOM05D000414 ORTHO05D000276 5.5e-06 53.5 23 91.3
BcaC08g46312 Brassica carinata HOM05D000414 ORTHO05D000276 5.5e-06 53.5 23 91.3
BcaC08g46313 Brassica carinata HOM05D000414 ORTHO05D000276 5.5e-06 53.5 23 91.3
A07p35050 Brassica napus HOM05D000414 ORTHO05D000276 5.5e-06 53.5 23 91.3
C06p41220 Brassica napus HOM05D000414 ORTHO05D000276 5.5e-06 53.5 23 91.3
BolC6t39303H Brassica oleracea HOM05D000414 ORTHO05D000276 5.5e-06 53.5 23 91.3
Manes.06G070600 Manihot esculenta HOM05D000414 ORTHO05D000276 5.5e-06 53.5 23 87.0
Os03g0830400 Oryza sativa ssp. japonica HOM05D000414 ORTHO05D000276 5.5e-06 53.5 23 82.6
Os06g0266266 Oryza sativa ssp. japonica HOM05D000414 ORTHO05D000276 5.5e-06 53.5 23 87.0
HPP92_015004 Vanilla planifolia HOM05D000414 ORTHO05D000276 5.5e-06 53.5 23 87.0
Os03g0830200 Oryza sativa ssp. japonica HOM05D000414 ORTHO05D000276 7.2e-06 53.1 23 82.6
RcHm_v2.0_Chr4g0435581 Rosa chinensis HOM05D000414 ORTHO05D000276 7.2e-06 53.1 23 87.0
TWI74G0829 Tripterygium wilfordii HOM05D000414 ORTHO05D000276 7.2e-06 53.1 23 87.0
TWI74G0955 Tripterygium wilfordii HOM05D000414 ORTHO05D000276 7.2e-06 53.1 23 87.0
Zm00001eb211260 Zea mays HOM05D000414 ORTHO05D000276 7.2e-06 53.1 23 82.6
CSS0033448 Camellia sinensis var. sinensis HOM05D000414 ORTHO05D000276 9.5e-06 52.8 23 82.6
Glyma.05G236300 Glycine max HOM05D000414 ORTHO05D000276 9.5e-06 52.8 23 82.6
Gohir.D01G141800 Gossypium hirsutum HOM05D000414 ORTHO05D000276 9.5e-06 52.8 23 87.0
Gorai.002G174700 Gossypium raimondii HOM05D000414 ORTHO05D000276 9.5e-06 52.8 23 87.0
Lj4g0015327 Lotus japonicus HOM05D000414 ORTHO05D000276 9.5e-06 52.8 23 82.6
Zm00001eb063530 Zea mays HOM05D000414 ORTHO05D000276 9.5e-06 52.8 23 82.6


User provided reference genes

Program Settings