Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 7.2e-220 766.9 383 100.0
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 1.3e-139 500.4 384 69.5
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 4.1e-138 495.4 382 67.5
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 1.4e-135 486.9 384 68.0
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 1.9e-135 486.5 372 68.5
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 7.2e-135 484.6 388 68.3
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 2.2e-131 473.0 397 64.5
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 5.9e-129 464.9 383 64.2
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 7.7e-129 464.5 385 64.2
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 5.0e-128 461.8 385 63.6
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 4.2e-127 458.8 379 64.6
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 4.2e-127 458.8 385 63.1
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 7.2e-127 458.0 385 62.9
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 7.2e-127 458.0 394 63.2
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 4.7e-126 455.3 394 62.7
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 6.1e-126 454.9 385 62.3
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 7.9e-126 454.5 383 62.1
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 1.8e-125 453.4 383 61.4
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 6.7e-125 451.4 384 63.0
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 6.7e-125 451.4 383 62.4
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 1.5e-124 450.3 395 62.0
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 6.3e-123 444.9 381 62.7
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 6.3e-123 444.9 337 67.7
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 1.1e-122 444.1 383 63.2
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 1.1e-122 444.1 381 62.7
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 1.8e-122 443.4 379 61.7
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 1.8e-122 443.4 384 62.5
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 3.1e-122 442.6 384 61.2
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 5.3e-122 441.8 379 63.1
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 2.0e-121 439.9 383 62.4
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 2.6e-121 439.5 373 62.7
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 3.5e-121 439.1 364 63.7
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 1.0e-120 437.6 384 62.8
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 1.7e-120 436.8 332 67.8
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 3.8e-120 435.6 371 62.8
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 8.5e-120 434.5 389 59.4
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 1.1e-119 434.1 320 69.4
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 1.1e-119 434.1 315 70.2
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 1.1e-119 434.1 320 68.1
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 5.5e-119 431.8 389 60.4
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 1.2e-118 430.6 382 59.9
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 2.1e-118 429.9 335 64.5
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 2.1e-118 429.9 318 68.2
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 2.7e-118 429.5 384 59.1
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 6.1e-118 428.3 384 59.9
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 8.0e-118 427.9 389 59.9
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 2.3e-117 426.4 318 66.7
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 1.1e-116 424.1 363 63.1
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 1.5e-116 423.7 385 60.0
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 1.3e-115 420.6 363 62.5
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 1.3e-115 420.6 383 58.0
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 2.2e-115 419.9 387 59.7
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 3.7e-115 419.1 361 60.7
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 3.7e-115 419.1 389 58.4
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 6.3e-115 418.3 373 59.5
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 8.2e-115 417.9 332 65.1
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 1.4e-114 417.2 320 65.3
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 2.4e-114 416.4 388 58.5
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 4.1e-114 415.6 383 58.0
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 9.1e-114 414.5 383 57.7
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 1.2e-113 414.1 318 64.5
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 2.0e-113 413.3 348 63.5
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 2.7e-113 412.9 387 58.1
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 4.5e-113 412.1 383 57.4
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 6.5e-112 408.3 287 72.5
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 6.5e-112 408.3 337 65.0
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 1.9e-111 406.8 387 57.1
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 1.9e-111 406.8 385 57.1
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 1.9e-111 406.8 335 64.2
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 1.9e-111 406.8 383 57.4
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 2.5e-111 406.4 410 55.9
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 4.2e-111 405.6 384 56.8
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 5.5e-111 405.2 384 57.0
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 7.2e-111 404.8 384 56.5
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 9.4e-111 404.4 385 59.2
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 1.2e-110 404.1 342 61.7
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 1.2e-110 404.1 314 63.7
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 2.1e-110 403.3 349 60.2
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 2.7e-110 402.9 372 57.5
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 2.7e-110 402.9 324 65.1
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 4.7e-110 402.1 317 63.4
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 8.8e-109 397.9 324 63.6
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 1.5e-108 397.1 317 63.4
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 4.4e-108 395.6 317 63.4
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 9.8e-108 394.4 388 55.4
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 2.2e-107 393.3 326 62.6
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 1.7e-99 367.1 353 55.0
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 1.1e-98 364.4 384 53.9
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 1.8e-98 363.6 384 52.9
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 1.2e-97 360.9 379 54.6
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 3.5e-97 359.4 291 61.2
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 9.5e-95 351.3 383 52.0
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 3.2e-90 336.3 376 52.4
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 4.9e-83 312.4 303 50.2
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 4.6e-81 305.8 356 50.8
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 2.1e-78 297.0 389 48.6
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 4.7e-78 295.8 289 51.6
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 6.8e-77 292.0 303 51.8
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 2.2e-75 287.0 283 50.9
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 5.1e-72 275.8 314 44.9
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 1.9e-71 273.9 310 50.0
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 3.7e-67 259.6 203 62.6
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 4.7e-62 242.7 193 65.8
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 4.7e-62 242.7 279 50.2
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 6.8e-61 238.8 134 85.1
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 3.8e-59 233.0 134 82.8
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 2.3e-56 223.8 134 77.6
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 1.3e-46 191.4 301 36.5
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 1.1e-45 188.3 141 59.6
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 1.1e-42 178.3 98 85.7
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 7.9e-41 172.2 312 37.5
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 1.4e-26 124.8 347 25.9
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 2.7e-25 120.6 300 30.7
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 1.3e-24 118.2 327 29.1
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 1.2e-17 95.1 99 50.5
Actinidia38386 Actinidia chinensis HOM05D004993 ORTHO05D008532 2.3e-16 90.9 100 51.0
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 3.3e-15 87.0 75 54.7


User provided reference genes

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