Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro01331 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 1.1e-52 209.5 97 100.0
vmacro05591 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 1.8e-50 202.2 92 100.0
vmacro23425 Vaccinium macrocarpon HOM05D005988 ORTHO05D007392 1.8e-50 202.2 92 100.0
Rhsim04G0162300 Rhododendron simsii HOM05D005988 ORTHO05D007392 8.9e-50 199.9 95 95.8
Rhsim12G0099600 Rhododendron simsii HOM05D005988 ORTHO05D007392 3.4e-49 198.0 97 93.8
CSS0025775 Camellia sinensis var. sinensis HOM05D005988 ORTHO05D007392 6.0e-46 187.2 95 89.5
Hma1.2p1_0065F.1_g035500 Hydrangea macrophylla HOM05D005988 ORTHO05D007392 6.2e-43 177.2 95 84.2
Gohir.A03G126200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 1.1e-42 176.4 92 87.0
Cc11_g16890 Coffea canephora HOM05D005988 ORTHO05D007392 4.0e-42 174.5 96 83.3
PGR102G1123 Punica granatum HOM05D005988 ORTHO05D007392 5.2e-42 174.1 85 89.4
Gohir.D02G149200 Gossypium hirsutum HOM05D005988 ORTHO05D007392 9.0e-42 173.3 92 84.8
Gorai.005G167100 Gossypium raimondii HOM05D005988 ORTHO05D007392 9.0e-42 173.3 92 84.8
Manes.13G012300 Manihot esculenta HOM05D005988 ORTHO05D007392 1.5e-41 172.6 90 86.7
Nitab4.5_0006506g0010 Nicotiana tabacum HOM05D005988 ORTHO05D007392 3.4e-41 171.4 97 82.5
Nn4g22324 Nelumbo nucifera HOM05D005988 ORTHO05D007392 7.6e-41 170.2 84 88.1
Nitab4.5_0005361g0020 Nicotiana tabacum HOM05D005988 ORTHO05D007392 7.6e-41 170.2 97 81.4
Cfa009369 Carpinus fangiana HOM05D005988 ORTHO05D007392 1.3e-40 169.5 84 89.3
Haze_12418 Corylus avellana HOM05D005988 ORTHO05D007392 1.3e-40 169.5 84 89.3
Thecc.02G210500 Theobroma cacao HOM05D005988 ORTHO05D007392 1.3e-40 169.5 92 82.6
Manes.12G011400 Manihot esculenta HOM05D005988 ORTHO05D007392 1.7e-40 169.1 90 84.4
THA.LOC109117182 Tarenaya hassleriana HOM05D005988 ORTHO05D007392 2.2e-40 168.7 95 78.9
COL.COLO4_20400 Corchorus olitorius HOM05D005988 ORTHO05D007392 2.9e-40 168.3 93 81.7
Atru.chr11.2323 Acer truncatum HOM05D005988 ORTHO05D007392 3.8e-40 167.9 97 79.4
DCAR_031202 Daucus carota HOM05D005988 ORTHO05D007392 3.8e-40 167.9 87 82.8
Potri.001G055400 Populus trichocarpa HOM05D005988 ORTHO05D007392 3.8e-40 167.9 90 84.4
CiPaw.05G109900 Carya illinoinensis HOM05D005988 ORTHO05D007392 6.4e-40 167.2 84 86.9
Potri.003G173000 Populus trichocarpa HOM05D005988 ORTHO05D007392 1.1e-39 166.4 89 85.4
Sabra01G0040000 Salix brachista HOM05D005988 ORTHO05D007392 1.1e-39 166.4 90 83.3
Cpa.g.sc43.58 Carica papaya HOM05D005988 ORTHO05D007392 1.4e-39 166.0 84 88.1
MELO3C011867.2 Cucumis melo HOM05D005988 ORTHO05D007392 1.4e-39 166.0 85 84.7
MBI01_g01248_MAGBIO Magnolia biondii HOM05D005988 ORTHO05D007392 1.4e-39 166.0 85 84.7
Sabra03G0126500 Salix brachista HOM05D005988 ORTHO05D007392 1.4e-39 166.0 89 84.3
CANSAT01G3258 Cannabis sativa HOM05D005988 ORTHO05D007392 3.2e-39 164.9 84 85.7
PSO017G5437 Papaver somniferum HOM05D005988 ORTHO05D007392 3.2e-39 164.9 85 82.4
CsaV3_5G030290 Cucumis sativus L. HOM05D005988 ORTHO05D007392 5.4e-39 164.1 85 82.4
Prupe.1G225900 Prunus persica HOM05D005988 ORTHO05D007392 7.1e-39 163.7 96 78.1
CDE06G1110 Ceratophyllum demersum HOM05D005988 ORTHO05D007392 9.3e-39 163.3 85 82.4
ClCG11G013680 Citrullus lanatus HOM05D005988 ORTHO05D007392 1.6e-38 162.5 85 82.4
Eucgr.B03491 Eucalyptus grandis HOM05D005988 ORTHO05D007392 2.1e-38 162.2 86 83.7
Sed0026530 Sechium edule HOM05D005988 ORTHO05D007392 2.1e-38 162.2 85 84.7
GSVIVG01010482001 Vitis vinifera HOM05D005988 ORTHO05D007392 2.1e-38 162.2 88 79.5
RcHm_v2.0_Chr4g0430261 Rosa chinensis HOM05D005988 ORTHO05D007392 2.7e-38 161.8 84 84.5
BcaB03g15204 Brassica carinata HOM05D005988 ORTHO05D007392 3.5e-38 161.4 95 75.8
Duzib251G0426 Durio zibethinus HOM05D005988 ORTHO05D007392 3.5e-38 161.4 92 81.5
ECA233G0411 Erigeron canadensis HOM05D005988 ORTHO05D007392 3.5e-38 161.4 97 77.3
Actinidia08072 Actinidia chinensis HOM05D005988 ORTHO05D007392 4.6e-38 161.0 97 78.4
Duzib251G0424 Durio zibethinus HOM05D005988 ORTHO05D007392 4.6e-38 161.0 92 80.4
PGSC0003DMG400017679 Solanum tuberosum HOM05D005988 ORTHO05D007392 4.6e-38 161.0 86 83.7
CAN.G875.9 Capsicum annuum HOM05D005988 ORTHO05D007392 7.8e-38 160.2 93 78.5
Lalb_Chr07g0187141 Lupinus albus HOM05D005988 ORTHO05D007392 7.8e-38 160.2 88 77.3
Hund13388 Selenicereus undatus HOM05D005988 ORTHO05D007392 7.8e-38 160.2 87 80.5
Aa31sc377G10 Aethionema arabicum HOM05D005988 ORTHO05D007392 1.0e-37 159.8 97 75.3
CARHR059890 Cardamine hirsuta HOM05D005988 ORTHO05D007392 1.0e-37 159.8 95 75.8
Glyma.05G147302 Glycine max HOM05D005988 ORTHO05D007392 1.0e-37 159.8 84 82.1
Lalb_Chr13g0294321 Lupinus albus HOM05D005988 ORTHO05D007392 1.3e-37 159.5 88 77.3
Aqoxy3G00796 Aquilegia oxysepala HOM05D005988 ORTHO05D007392 1.7e-37 159.1 85 81.2
Ca_18034_v3 Cicer arietinum L. HOM05D005988 ORTHO05D007392 1.7e-37 159.1 84 82.1
Glyma.08G104300 Glycine max HOM05D005988 ORTHO05D007392 1.7e-37 159.1 84 81.0
Phvul.L002046 Phaseolus vulgaris HOM05D005988 ORTHO05D007392 1.7e-37 159.1 84 82.1
AT1G67350 Arabidopsis thaliana HOM05D005988 ORTHO05D007392 2.3e-37 158.7 95 74.7
C06p42910 Brassica napus HOM05D005988 ORTHO05D007392 2.3e-37 158.7 93 76.3
Solyc04g045620.3 Solanum lycopersicum HOM05D005988 ORTHO05D007392 2.3e-37 158.7 83 84.3
Sopen04g017580 Solanum pennellii HOM05D005988 ORTHO05D007392 2.3e-37 158.7 83 84.3
FvH4_4g23770 Fragaria vesca HOM05D005988 ORTHO05D007392 3.9e-37 157.9 83 83.1
FAN07G1208 Fragaria x ananassa HOM05D005988 ORTHO05D007392 3.9e-37 157.9 83 83.1
FAN12G0190 Fragaria x ananassa HOM05D005988 ORTHO05D007392 3.9e-37 157.9 83 83.1
FAN17G2984 Fragaria x ananassa HOM05D005988 ORTHO05D007392 3.9e-37 157.9 83 83.1
EL10Ac2g02768 Beta vulgaris HOM05D005988 ORTHO05D007392 5.1e-37 157.5 85 80.0
BcaB05g24271 Brassica carinata HOM05D005988 ORTHO05D007392 5.1e-37 157.5 93 75.3
BcaB05g24277 Brassica carinata HOM05D005988 ORTHO05D007392 5.1e-37 157.5 93 75.3
BcaC08g46168 Brassica carinata HOM05D005988 ORTHO05D007392 5.1e-37 157.5 93 75.3
AUR62034347 Chenopodium quinoa HOM05D005988 ORTHO05D007392 5.1e-37 157.5 84 81.0
TPR.G34164 Trifolium pratense HOM05D005988 ORTHO05D007392 5.1e-37 157.5 84 81.0
AL2G25900 Arabidopsis lyrata HOM05D005988 ORTHO05D007392 8.7e-37 156.8 95 73.7
Psat0s2314g0040 Pisum sativum HOM05D005988 ORTHO05D007392 8.7e-37 156.8 84 79.8
ATR0582G290 Amborella trichopoda HOM05D005988 ORTHO05D007392 1.1e-36 156.4 85 80.0
A07p33950 Brassica napus HOM05D005988 ORTHO05D007392 1.1e-36 156.4 93 74.2
Carub.0002s1364 Capsella rubella HOM05D005988 ORTHO05D007392 1.1e-36 156.4 95 73.7
HanXRQChr12g0372221 Helianthus annuus HOM05D005988 ORTHO05D007392 1.1e-36 156.4 90 76.7
Sp5g22300 Schrenkiella parvula HOM05D005988 ORTHO05D007392 1.1e-36 156.4 91 75.8
Sc15g0005560 Simmondsia chinensis HOM05D005988 ORTHO05D007392 1.1e-36 156.4 88 77.3
Sc15g0005760 Simmondsia chinensis HOM05D005988 ORTHO05D007392 1.1e-36 156.4 88 77.3
arahy.Tifrunner.gnm1.ann1.XY4E2W Arachis hypogaea HOM05D005988 ORTHO05D007392 1.9e-36 155.6 84 79.8
arahy.Tifrunner.gnm1.ann1.5IUK3V Arachis hypogaea HOM05D005988 ORTHO05D007392 2.5e-36 155.2 84 79.8
arahy.Tifrunner.gnm1.ann1.CH2TLP Arachis hypogaea HOM05D005988 ORTHO05D007392 2.5e-36 155.2 84 79.8
arahy.Tifrunner.gnm1.ann1.NCU5C9 Arachis hypogaea HOM05D005988 ORTHO05D007392 2.5e-36 155.2 84 79.8
AUR62022358 Chenopodium quinoa HOM05D005988 ORTHO05D007392 2.5e-36 155.2 83 80.7
Thhalv10019308m.g Eutrema salsugineum HOM05D005988 ORTHO05D007392 2.5e-36 155.2 85 80.0
BcaC03g14837 Brassica carinata HOM05D005988 ORTHO05D007392 3.3e-36 154.8 85 80.0
A02p14180 Brassica napus HOM05D005988 ORTHO05D007392 3.3e-36 154.8 85 80.0
C02p22980 Brassica napus HOM05D005988 ORTHO05D007392 3.3e-36 154.8 85 80.0
BraA02t06481Z Brassica rapa HOM05D005988 ORTHO05D007392 3.3e-36 154.8 85 80.0
Nitab4.5_0000060g0090 Nicotiana tabacum HOM05D005988 ORTHO05D007392 4.3e-36 154.5 81 84.0
MD16G1119100 Malus domestica HOM05D005988 ORTHO05D007392 9.6e-36 153.3 80 83.8
TPR.G17077 Trifolium pratense HOM05D005988 ORTHO05D007392 9.6e-36 153.3 84 78.6
Lj4g0004056 Lotus japonicus HOM05D005988 ORTHO05D007392 2.1e-35 152.1 84 77.4
Peaxi162Scf00038g00014 Petunia axillaris HOM05D005988 ORTHO05D007392 2.8e-35 151.8 94 75.5
Ah.10g030080 Amaranthus hybridus HOM05D005988 ORTHO05D007392 3.6e-35 151.4 81 80.2
FAN22G1192 Fragaria x ananassa HOM05D005988 ORTHO05D007392 1.1e-34 149.8 79 82.3
Medtr8g080630 Medicago truncatula HOM05D005988 ORTHO05D007392 1.1e-34 149.8 83 77.1
QL03p052764 Quercus lobata HOM05D005988 ORTHO05D007392 3.1e-34 148.3 84 78.6
SalBow8G0976 Salvia bowleyana HOM05D005988 ORTHO05D007392 4.5e-33 144.4 85 75.3
HPP92_012485 Vanilla planifolia HOM05D005988 ORTHO05D007392 9.9e-33 143.3 83 79.5
Migut.E00018 Erythranthe guttata HOM05D005988 ORTHO05D007392 1.7e-32 142.5 97 72.2
Os03g0685900 Oryza sativa ssp. japonica HOM05D005988 ORTHO05D007392 2.9e-32 141.7 83 73.5
SGA_v2.0_scaffold144G35838 Striga asiatica HOM05D005988 ORTHO05D007392 1.4e-31 139.4 86 72.1
Zm00001eb290200 Zea mays HOM05D005988 ORTHO05D007392 5.4e-31 137.5 83 72.3
DCAR_024095 Daucus carota HOM05D005988 ORTHO05D007392 7.1e-31 137.1 81 71.6
unitig_62.g23652 Utricularia gibba HOM05D005988 ORTHO05D007392 9.3e-31 136.7 93 65.6
MD13G1118900 Malus domestica HOM05D005988 ORTHO05D007392 2.1e-30 135.6 69 85.5
Zm00001eb422590 Zea mays HOM05D005988 ORTHO05D007392 6.0e-30 134.0 83 71.1
TWI75G1041 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 1.0e-29 133.3 84 72.6
Lsat_1_v5_gn_7_95720 Lactuca sativa HOM05D005988 ORTHO05D007392 1.9e-28 129.0 70 75.7
TWI18G1296 Tripterygium wilfordii HOM05D005988 ORTHO05D007392 1.6e-27 125.9 84 66.7
Lalb_Chr23g0278031 Lupinus albus HOM05D005988 ORTHO05D007392 6.2e-27 124.0 84 67.9
Lalb_Chr23g0278041 Lupinus albus HOM05D005988 ORTHO05D007392 1.1e-26 123.2 84 67.9
Migut.G00897 Erythranthe guttata HOM05D005988 ORTHO05D007392 6.4e-24 114.0 70 74.3
Migut.O00848 Erythranthe guttata HOM05D005988 ORTHO05D007392 6.4e-24 114.0 70 74.3
Nitab4.5_0001404g0080 Nicotiana tabacum HOM05D005988 ORTHO05D007392 1.8e-21 105.9 63 73.0
CBR_g8533 Chara braunii HOM05D005988 ORTHO05D007392 8.7e-21 103.6 91 50.5
Pp3c3_5450 Physcomitrium patens HOM05D005988 ORTHO05D007392 3.7e-19 98.2 82 50.0
Mapoly0011s0010 Marchantia polymorpha HOM05D005988 ORTHO05D007392 4.0e-18 94.7 78 53.8
SMO356G0160 Selaginella moellendorffii HOM05D005988 ORTHO05D007392 3.2e-15 85.1 85 43.5
AagrBONN_evm.TU.Sc2ySwM_117.535 Anthoceros agrestis HOM05D005988 ORTHO05D007392 5.5e-15 84.3 78 47.4
TAR629G1917 Trochodendron aralioides HOM05D000133 ORTHO05D002928 7.1e-15 84.0 42 78.6
Actinidia30649 Actinidia chinensis HOM05D005988 ORTHO05D007392 3.1e-10 68.6 41 78.0
BcaB05g24274 Brassica carinata HOM05D005988 ORTHO05D007392 6.9e-10 67.4 87 48.3
arahy.Tifrunner.gnm1.ann1.BFR0IC Arachis hypogaea HOM05D005988 ORTHO05D007392 2.5e-07 58.9 56 48.2
Zm00001eb053260 Zea mays HOM05D005988 ORTHO05D007392 2.1e-06 55.8 36 69.4
Zm00001eb053240 Zea mays HOM05D005988 ORTHO05D007392 3.6e-06 55.1 36 66.7


User provided reference genes

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