Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro01162 Vaccinium macrocarpon HOM05D006246 ORTHO05D007932 9.5e-27 123.6 56 100.0
Cc05_g03280 Coffea canephora HOM05D006246 ORTHO05D007932 3.7e-15 85.1 53 73.6
Ca_00010_v3 Cicer arietinum L. HOM05D006246 ORTHO05D007932 8.3e-15 84.0 57 73.7
Ca_00013_v3 Cicer arietinum L. HOM05D006246 ORTHO05D007932 8.3e-15 84.0 57 73.7
HPP92_026670 Vanilla planifolia HOM05D006246 ORTHO05D007932 1.4e-14 83.2 51 74.5
SHI11488 Sapria himalayana HOM05D006246 ORTHO05D007932 1.9e-14 82.8 52 67.3
Lalb_Chr01g0009371 Lupinus albus HOM05D006246 ORTHO05D007932 2.4e-14 82.4 52 75.0
Psat6g198440 Pisum sativum HOM05D006246 ORTHO05D007932 2.4e-14 82.4 53 73.6
Medtr1g101240 Medicago truncatula HOM05D006246 ORTHO05D007932 3.2e-14 82.0 40 90.0
Lalb_Chr03g0034581 Lupinus albus HOM05D006246 ORTHO05D007932 4.1e-14 81.6 52 73.1
Phvul.009G159900 Phaseolus vulgaris HOM05D006246 ORTHO05D007932 5.4e-14 81.3 37 97.3
THA.LOC104800880 Tarenaya hassleriana HOM05D006246 ORTHO05D007932 5.4e-14 81.3 41 85.4
TPR.G26967 Trifolium pratense HOM05D006246 ORTHO05D007932 5.4e-14 81.3 57 70.2
Medtr7g085440 Medicago truncatula HOM05D006246 ORTHO05D007932 9.2e-14 80.5 39 89.7
HanXRQChr11g0322351 Helianthus annuus HOM05D006246 ORTHO05D007932 1.2e-13 80.1 46 80.4
TPR.G20664 Trifolium pratense HOM05D006246 ORTHO05D007932 1.2e-13 80.1 52 71.2
Migut.C01275 Erythranthe guttata HOM05D006246 ORTHO05D007932 2.7e-13 79.0 41 82.9
Oeu021218.1 Olea europaea HOM05D006246 ORTHO05D007932 2.7e-13 79.0 56 69.6
CSS0014325 Camellia sinensis var. sinensis HOM05D006246 ORTHO05D007932 3.5e-13 78.6 35 97.1
DCAR_027686 Daucus carota HOM05D006246 ORTHO05D007932 6.0e-13 77.8 37 91.9
THA.LOC104826210 Tarenaya hassleriana HOM05D006246 ORTHO05D007932 6.0e-13 77.8 35 94.3
Glyma.04G204100 Glycine max HOM05D006246 ORTHO05D007932 7.8e-13 77.4 36 91.7
Glyma.06G161300 Glycine max HOM05D006246 ORTHO05D007932 7.8e-13 77.4 36 91.7
TWI23G1247 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 7.8e-13 77.4 36 91.7
Eucgr.I02713 Eucalyptus grandis HOM05D006246 ORTHO05D007932 1.0e-12 77.0 42 88.1
Sed0027909 Sechium edule HOM05D006246 ORTHO05D007932 1.0e-12 77.0 53 73.6
Ciclev10002937m.g Citrus clementina HOM05D006246 ORTHO05D007932 1.7e-12 76.3 37 89.2
Atru.chr13.2337 Acer truncatum HOM05D006246 ORTHO05D007932 2.3e-12 75.9 37 89.2
Atru.chr3.3065 Acer truncatum HOM05D006246 ORTHO05D007932 2.3e-12 75.9 37 89.2
BcaB02g10382 Brassica carinata HOM05D006246 ORTHO05D007932 3.9e-12 75.1 35 88.6
Cpa.g.sc49.43 Carica papaya HOM05D006246 ORTHO05D007932 3.9e-12 75.1 36 91.7
Sp4g13780 Schrenkiella parvula HOM05D006246 ORTHO05D007932 3.9e-12 75.1 36 86.1
Actinidia30538 Actinidia chinensis HOM05D006246 ORTHO05D007932 5.0e-12 74.7 34 97.1
arahy.Tifrunner.gnm1.ann1.V9PSGM Arachis hypogaea HOM05D006246 ORTHO05D007932 5.0e-12 74.7 52 69.2
CDE02G3719 Ceratophyllum demersum HOM05D006246 ORTHO05D007932 5.0e-12 74.7 44 77.3
Cfa012983 Carpinus fangiana HOM05D006246 ORTHO05D007932 6.6e-12 74.3 34 91.2
FvH4_5g18370 Fragaria vesca HOM05D006246 ORTHO05D007932 6.6e-12 74.3 34 91.2
FAN08G0289 Fragaria x ananassa HOM05D006246 ORTHO05D007932 6.6e-12 74.3 34 91.2
FAN13G0403 Fragaria x ananassa HOM05D006246 ORTHO05D007932 6.6e-12 74.3 34 91.2
FAN18G0928 Fragaria x ananassa HOM05D006246 ORTHO05D007932 6.6e-12 74.3 34 91.2
Sed0011737 Sechium edule HOM05D006246 ORTHO05D007932 6.6e-12 74.3 34 91.2
Lj5g0026305 Lotus japonicus HOM05D006246 ORTHO05D007932 1.1e-11 73.6 33 93.9
SalBow8G1996 Salvia bowleyana HOM05D006246 ORTHO05D007932 1.1e-11 73.6 34 91.2
SGA_v2.0_scaffold118G32544 Striga asiatica HOM05D006246 ORTHO05D007932 1.1e-11 73.6 34 91.2
SGA_v2.0_scaffold24G10594 Striga asiatica HOM05D006246 ORTHO05D007932 1.1e-11 73.6 34 91.2
Aa31LG5G5660 Aethionema arabicum HOM05D006246 ORTHO05D007932 1.5e-11 73.2 34 88.2
BcaC02g11223 Brassica carinata HOM05D006246 ORTHO05D007932 1.5e-11 73.2 34 88.2
BolC4t23440H Brassica oleracea HOM05D006246 ORTHO05D007932 1.5e-11 73.2 34 88.2
Thhalv10017462m.g Eutrema salsugineum HOM05D006246 ORTHO05D007932 1.5e-11 73.2 34 88.2
Sc23g0001630 Simmondsia chinensis HOM05D006246 ORTHO05D007932 1.5e-11 73.2 53 69.8
MD06G1239400 Malus domestica HOM05D006246 ORTHO05D007932 1.9e-11 72.8 34 88.2
TWI14G1413 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 1.9e-11 72.8 45 75.6
Ah.05g178740 Amaranthus hybridus HOM05D006246 ORTHO05D007932 2.5e-11 72.4 41 75.6
Haze_21346 Corylus avellana HOM05D006246 ORTHO05D007932 2.5e-11 72.4 33 90.9
Haze_21352 Corylus avellana HOM05D006246 ORTHO05D007932 2.5e-11 72.4 33 90.9
Nitab4.5_0001579g0010 Nicotiana tabacum HOM05D006246 ORTHO05D007932 2.5e-11 72.4 58 60.3
PSO170G6052 Papaver somniferum HOM05D006246 ORTHO05D007932 2.5e-11 72.4 34 91.2
PSO782G0303 Papaver somniferum HOM05D006246 ORTHO05D007932 2.5e-11 72.4 34 91.2
Sp1g40730 Schrenkiella parvula HOM05D006246 ORTHO05D007932 3.3e-11 72.0 36 83.3
Aqoxy7G03540 Aquilegia oxysepala HOM05D006246 ORTHO05D007932 4.3e-11 71.6 33 93.9
Carub.0004s1261 Capsella rubella HOM05D006246 ORTHO05D007932 5.6e-11 71.2 33 87.9
CARHR124920 Cardamine hirsuta HOM05D006246 ORTHO05D007932 5.6e-11 71.2 33 87.9
CDE09G0543 Ceratophyllum demersum HOM05D000196 ORTHO05D000279 5.6e-11 71.2 67 55.2
Sabra07G0084000 Salix brachista HOM05D006246 ORTHO05D007932 5.6e-11 71.2 34 88.2
TWI59G0384 Tripterygium wilfordii HOM05D006246 ORTHO05D007932 5.6e-11 71.2 34 88.2
TAR636G3186 Trochodendron aralioides HOM05D006246 ORTHO05D007932 5.6e-11 71.2 55 65.5
Actinidia08157 Actinidia chinensis HOM05D006246 ORTHO05D007932 7.3e-11 70.9 63 58.7
Carub.0002s2226 Capsella rubella HOM05D006246 ORTHO05D007932 1.2e-10 70.1 33 84.8
QL02p028696 Quercus lobata HOM05D006246 ORTHO05D007932 1.2e-10 70.1 33 87.9
Gorai.009G310900 Gossypium raimondii HOM05D006246 ORTHO05D007932 1.6e-10 69.7 34 85.3
Os05g0270400 Oryza sativa ssp. japonica HOM05D006246 ORTHO05D007932 1.6e-10 69.7 37 86.5
A05p14300 Brassica napus HOM05D006246 ORTHO05D007932 2.1e-10 69.3 32 87.5
A05p14510 Brassica napus HOM05D006246 ORTHO05D007932 2.1e-10 69.3 34 82.4
Zm00001eb059790 Zea mays HOM05D006246 ORTHO05D007932 2.1e-10 69.3 68 54.4
COL.COLO4_29720 Corchorus olitorius HOM05D006246 ORTHO05D007932 3.6e-10 68.6 33 87.9
Duzib114G0955 Durio zibethinus HOM05D006246 ORTHO05D007932 3.6e-10 68.6 34 82.4
Migut.N03358 Erythranthe guttata HOM05D006246 ORTHO05D007932 3.6e-10 68.6 32 87.5
Os04g0295000 Oryza sativa ssp. japonica HOM05D006246 ORTHO05D007932 3.6e-10 68.6 37 83.8
Potri.007G101900 Populus trichocarpa HOM05D006246 ORTHO05D007932 3.6e-10 68.6 32 90.6
Duzib106G0997 Durio zibethinus HOM05D006246 ORTHO05D007932 4.7e-10 68.2 33 84.8
Thecc.03G070200 Theobroma cacao HOM05D006246 ORTHO05D007932 4.7e-10 68.2 33 84.8
Gohir.A05G293700 Gossypium hirsutum HOM05D006246 ORTHO05D007932 6.2e-10 67.8 33 84.8
Gohir.D05G294400 Gossypium hirsutum HOM05D006246 ORTHO05D007932 6.2e-10 67.8 33 84.8
Potri.005G067400 Populus trichocarpa HOM05D006246 ORTHO05D007932 6.2e-10 67.8 57 61.4
MBI03_g07695_MAGBIO Magnolia biondii HOM05D006246 ORTHO05D007932 8.1e-10 67.4 31 90.3
CAN.G1647.5 Capsicum annuum HOM05D006246 ORTHO05D007932 1.1e-09 67.0 34 82.4
Duzib128G0188 Durio zibethinus HOM05D006246 ORTHO05D007932 1.8e-09 66.2 32 84.4
BraA05t20382Z Brassica rapa HOM05D006246 ORTHO05D007932 3.1e-09 65.5 33 78.8
Nitab4.5_0000365g0140 Nicotiana tabacum HOM05D006246 ORTHO05D007932 4.0e-09 65.1 32 87.5
Gohir.A05G410500 Gossypium hirsutum HOM05D006246 ORTHO05D007932 5.2e-09 64.7 31 87.1
AagrBONN_evm.TU.Sc2ySwM_344.1565 Anthoceros agrestis HOM05D006246 ORTHO05D007932 8.9e-09 63.9 56 58.9
Sabra05G0055400 Salix brachista HOM05D006246 ORTHO05D007932 8.9e-09 63.9 58 58.6
FAN04G2944 Fragaria x ananassa HOM05D006246 ORTHO05D007932 4.9e-07 58.2 31 80.6
Sc26g0000490 Simmondsia chinensis HOM05D006246 ORTHO05D007932 8.3e-07 57.4 54 63.0
Mapoly0071s0091 Marchantia polymorpha HOM05D006246 ORTHO05D007932 1.1e-06 57.0 54 51.9
PRCOL_00001132 Prasinoderma coloniale HOM05D006246 ORTHO05D007932 1.4e-06 56.6 39 64.1
CARHR068770 Cardamine hirsuta HOM05D006246 ORTHO05D007932 5.4e-06 54.7 38 63.2
ATR1136G009 Amborella trichopoda HOM05D006246 ORTHO05D007932 9.2e-06 53.9 51 52.9


User provided reference genes

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