Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro01154 Vaccinium macrocarpon HOM05D001273 ORTHO05D000023 5.9e-95 350.9 182 100.0
Dinv24821 Davidia involucrata HOM05D001273 ORTHO05D000023 1.1e-16 90.9 118 56.8
COL.COLO4_24212 Corchorus olitorius HOM05D001273 ORTHO05D000023 2.4e-16 89.7 117 54.7
MD13G1094700 Malus domestica HOM05D001273 ORTHO05D000023 2.4e-16 89.7 121 54.5
Manes.13G028000 Manihot esculenta HOM05D001273 ORTHO05D000023 9.3e-16 87.8 120 53.3
arahy.Tifrunner.gnm1.ann1.EFZ9HZ Arachis hypogaea HOM05D001273 ORTHO05D000023 1.6e-15 87.0 108 57.4
Prupe.1G250700 Prunus persica HOM05D001273 ORTHO05D000023 2.1e-15 86.7 120 51.7
PGR119G1021 Punica granatum HOM05D001273 ORTHO05D000023 3.5e-15 85.9 125 53.6
arahy.Tifrunner.gnm1.ann1.GGT1GB Arachis hypogaea HOM05D001273 ORTHO05D000023 7.9e-15 84.7 105 58.1
Lj6A808T42 Lonicera japonica HOM05D001273 ORTHO05D000023 7.9e-15 84.7 118 55.9
Actinidia12412 Actinidia chinensis HOM05D001273 ORTHO05D002703 1.8e-14 83.6 119 58.8
CANSAT01G0845 Cannabis sativa HOM05D001273 ORTHO05D000023 1.8e-14 83.6 122 52.5
FvH4_4g32880 Fragaria vesca HOM05D001273 ORTHO05D000023 6.7e-14 81.6 126 49.2
FAN12G3814 Fragaria x ananassa HOM05D001273 ORTHO05D000023 6.7e-14 81.6 126 49.2
Cfa009177 Carpinus fangiana HOM05D001273 ORTHO05D000023 1.5e-13 80.5 121 50.4
Manes.12G026300 Manihot esculenta HOM05D001273 ORTHO05D000023 1.5e-13 80.5 118 50.0
Haze_12211 Corylus avellana HOM05D001273 ORTHO05D000023 3.3e-13 79.3 121 49.6
Ah.02g130070 Amaranthus hybridus HOM05D001273 ORTHO05D000023 4.3e-13 79.0 133 48.1
Peaxi162Scf00086g01321 Petunia axillaris HOM05D001273 ORTHO05D000023 4.3e-13 79.0 126 49.2
Actinidia40496 Actinidia chinensis HOM05D001273 ORTHO05D000023 9.6e-13 77.8 119 54.6
Duzib251G0822 Durio zibethinus HOM05D001273 ORTHO05D000023 2.1e-12 76.6 117 52.1
Phvul.003G062100 Phaseolus vulgaris HOM05D001273 ORTHO05D000023 2.8e-12 76.3 124 50.8
Sabra10G0024900 Salix brachista HOM05D001273 ORTHO05D000023 3.6e-12 75.9 125 52.0
THA.LOC104822974 Tarenaya hassleriana HOM05D001273 ORTHO05D000023 3.6e-12 75.9 128 47.7
CsaV3_5G031420 Cucumis sativus L. HOM05D001273 ORTHO05D000023 8.1e-12 74.7 117 47.9
Actinidia08152 Actinidia chinensis HOM05D001273 ORTHO05D000023 2.4e-11 73.2 123 51.2
Cpa.g.sc69.74 Carica papaya HOM05D002061 ORTHO05D000023 2.4e-11 73.2 125 47.2
Hma1.2p1_0160F.1_g071080 Hydrangea macrophylla HOM05D001273 ORTHO05D000023 2.4e-11 73.2 126 48.4
Nn3g21887 Nelumbo nucifera HOM05D001273 ORTHO05D000023 2.4e-11 73.2 126 46.0
BcaB07g32335 Brassica carinata HOM05D001273 ORTHO05D000023 3.1e-11 72.8 118 47.5
HanXRQChr17g0539501 Helianthus annuus HOM05D001273 ORTHO05D000023 4.0e-11 72.4 114 50.9
Nitab4.5_0000329g0160 Nicotiana tabacum HOM05D001273 ORTHO05D000023 4.0e-11 72.4 125 44.8
Nitab4.5_0001819g0050 Nicotiana tabacum HOM05D001273 ORTHO05D000023 5.3e-11 72.0 124 46.0
Aa31LG7G7430 Aethionema arabicum HOM05D001273 ORTHO05D000023 6.9e-11 71.6 123 48.8
MELO3C011982.2 Cucumis melo HOM05D001273 ORTHO05D000023 6.9e-11 71.6 117 47.0
FAN22G0134 Fragaria x ananassa HOM05D001273 ORTHO05D000023 6.9e-11 71.6 119 46.2
Thhalv10007246m.g Eutrema salsugineum HOM05D001273 ORTHO05D000023 1.2e-10 70.9 123 46.3
CARHR023840 Cardamine hirsuta HOM05D001273 ORTHO05D000023 2.0e-10 70.1 123 46.3
FAN07G0004 Fragaria x ananassa HOM05D001273 ORTHO05D000023 2.0e-10 70.1 117 46.2
Carub.0001s2298 Capsella rubella HOM05D001273 ORTHO05D000023 2.6e-10 69.7 126 47.6
Sp1g20840 Schrenkiella parvula HOM05D001273 ORTHO05D000023 3.4e-10 69.3 125 45.6
Atru.chr1.3797 Acer truncatum HOM05D001273 ORTHO05D000023 7.6e-10 68.2 125 44.8
AT1G23400 Arabidopsis thaliana HOM05D001273 ORTHO05D000023 9.9e-10 67.8 125 48.8
ATR0796G079 Amborella trichopoda HOM05D001273 ORTHO05D000023 1.3e-09 67.4 119 45.4
Solyc11g066300.3 Solanum lycopersicum HOM05D001273 ORTHO05D000023 1.7e-09 67.0 119 46.2
Sopen11g026040 Solanum pennellii HOM05D001273 ORTHO05D000023 1.7e-09 67.0 119 46.2
GSVIVG01013770001 Vitis vinifera HOM05D001273 ORTHO05D000023 1.7e-09 67.0 118 49.2
PGSC0003DMG401000410 Solanum tuberosum HOM05D001273 ORTHO05D000023 2.2e-09 66.6 119 46.2
MSTRG.13361 Avicennia marina HOM05D001273 ORTHO05D000023 6.4e-09 65.1 131 44.3
SalBow8G1051 Salvia bowleyana HOM05D001273 ORTHO05D000023 6.4e-09 65.1 123 45.5
CDE09G0710 Ceratophyllum demersum HOM05D001273 ORTHO05D000023 8.4e-09 64.7 119 47.9
AUR62005411 Chenopodium quinoa HOM05D001273 ORTHO05D000023 1.4e-08 63.9 128 45.3
Aqoxy5G02781 Aquilegia oxysepala HOM05D001273 ORTHO05D000023 4.2e-08 62.4 114 46.5
unitig_62.g23667 Utricularia gibba HOM05D001273 ORTHO05D000023 4.2e-08 62.4 88 48.9
DCAR_024456 Daucus carota HOM05D001273 ORTHO05D000023 5.5e-08 62.0 116 43.1
TPR.G24819 Trifolium pratense HOM05D001273 ORTHO05D000023 1.6e-07 60.5 83 51.8
AL1G37190 Arabidopsis lyrata HOM05D001273 ORTHO05D000023 3.5e-07 59.3 95 45.3
Medtr8g069825 Medicago truncatula HOM05D001273 ORTHO05D000023 7.9e-07 58.2 37 78.4
Thecc.02G254400 Theobroma cacao HOM05D001273 ORTHO05D000023 1.0e-06 57.8 114 45.6
BraA09t39618Z Brassica rapa HOM05D001273 ORTHO05D000023 1.3e-06 57.4 118 42.4
CSS0021949 Camellia sinensis var. sinensis HOM05D001273 ORTHO05D000023 1.8e-06 57.0 118 48.3
Potri.010G042500 Populus trichocarpa HOM05D001273 ORTHO05D000023 3.0e-06 56.2 126 45.2
Sed0022733 Sechium edule HOM05D001273 ORTHO05D000023 3.0e-06 56.2 128 43.8


User provided reference genes

Program Settings