Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro01118 Vaccinium macrocarpon HOM05D005452 ORTHO05D006618 9.8e-62 240.0 122 100.0
vmacro06707 Vaccinium macrocarpon HOM05D005452 ORTHO05D006618 9.6e-33 143.7 79 89.9
CSS0031935 Camellia sinensis var. sinensis HOM05D005452 ORTHO05D006618 3.5e-27 125.2 83 75.9
Rhsim12G0039600 Rhododendron simsii HOM05D005452 ORTHO05D006618 3.5e-27 125.2 79 78.5
Actinidia08127 Actinidia chinensis HOM05D005452 ORTHO05D006618 5.1e-26 121.3 86 75.6
Actinidia01359 Actinidia chinensis HOM05D005452 ORTHO05D006618 6.2e-24 114.4 83 72.3
Peaxi162Scf00128g00434 Petunia axillaris HOM05D005452 ORTHO05D006618 1.5e-22 109.8 80 71.2
Oeu056705.1 Olea europaea HOM05D005452 ORTHO05D006618 3.4e-22 108.6 82 68.3
GSVIVG01003295001 Vitis vinifera HOM05D005452 ORTHO05D006618 4.4e-22 108.2 85 69.4
Sc04g0009650 Simmondsia chinensis HOM05D005452 ORTHO05D006618 7.6e-22 107.5 76 69.7
TAR629G2696 Trochodendron aralioides HOM05D005452 ORTHO05D006618 1.3e-21 106.7 85 68.2
Nitab4.5_0004217g0010 Nicotiana tabacum HOM05D001410 ORTHO05D006618 1.7e-21 106.3 119 52.1
Sopen10g023920 Solanum pennellii HOM05D005452 ORTHO05D006618 2.2e-21 105.9 72 72.2
Dinv15209 Davidia involucrata HOM05D005452 ORTHO05D006618 2.9e-21 105.5 82 68.3
TAR371G0357 Trochodendron aralioides HOM05D005452 ORTHO05D006618 2.9e-21 105.5 85 67.1
Hma1.2p1_0079F.1_g041110 Hydrangea macrophylla HOM05D005452 ORTHO05D006618 4.9e-21 104.8 79 69.6
CiPaw.05G172100 Carya illinoinensis HOM05D005452 ORTHO05D006618 8.4e-21 104.0 87 63.2
Solyc10g054060.2 Solanum lycopersicum HOM05D005452 ORTHO05D006618 1.4e-20 103.2 72 70.8
MELO3C030920.2 Cucumis melo HOM05D005452 ORTHO05D006618 1.9e-20 102.8 79 67.1
Nitab4.5_0002322g0150 Nicotiana tabacum HOM05D001410 ORTHO05D006618 1.9e-20 102.8 85 63.5
AUR62005503 Chenopodium quinoa HOM05D005452 ORTHO05D006618 2.4e-20 102.4 76 65.8
CsaV3_3G032030 Cucumis sativus L. HOM05D005452 ORTHO05D006618 2.4e-20 102.4 79 67.1
Nitab4.5_0000524g0050 Nicotiana tabacum HOM05D005452 ORTHO05D006618 3.2e-20 102.1 115 51.3
AUR62024237 Chenopodium quinoa HOM05D005452 ORTHO05D006618 4.2e-20 101.7 76 64.5
DCAR_003344 Daucus carota HOM05D005452 ORTHO05D006618 9.3e-20 100.5 79 62.0
Duzib268G1139 Durio zibethinus HOM05D005452 ORTHO05D006618 9.3e-20 100.5 86 60.5
Thecc.02G263300 Theobroma cacao HOM05D005452 ORTHO05D006618 2.1e-19 99.4 87 63.2
Lsat_1_v5_gn_4_85301 Lactuca sativa HOM05D005452 ORTHO05D006618 2.7e-19 99.0 85 62.4
Lj3C54T6 Lonicera japonica HOM05D005452 ORTHO05D006618 2.7e-19 99.0 82 63.4
Lsat_1_v5_gn_8_152800 Lactuca sativa HOM05D005452 ORTHO05D006618 3.5e-19 98.6 85 61.2
Hund25399 Selenicereus undatus HOM05D005452 ORTHO05D006618 3.5e-19 98.6 64 76.6
Atru.chr11.2163 Acer truncatum HOM05D005452 ORTHO05D006618 4.6e-19 98.2 91 61.5
ClCG10G012250 Citrullus lanatus HOM05D005452 ORTHO05D006618 4.6e-19 98.2 79 64.6
CANSAT11G1680 Cannabis sativa HOM05D005452 ORTHO05D006618 7.9e-19 97.4 79 67.1
CAN.G128.103 Capsicum annuum HOM05D005452 ORTHO05D000001 7.9e-19 97.4 82 64.6
PGR102G3216 Punica granatum HOM05D005452 ORTHO05D006618 7.9e-19 97.4 86 64.0
Sed0011581 Sechium edule HOM05D005452 ORTHO05D006618 7.9e-19 97.4 83 63.9
EL10Ac5g10516 Beta vulgaris HOM05D005452 ORTHO05D006618 1.0e-18 97.1 76 59.2
QL03p056962 Quercus lobata HOM05D005452 ORTHO05D006618 1.3e-18 96.7 89 58.4
Gorai.009G233700 Gossypium raimondii HOM05D005452 ORTHO05D006618 1.7e-18 96.3 86 65.1
Cc01_g03580 Coffea canephora HOM05D005452 ORTHO05D006618 2.3e-18 95.9 80 63.8
Gohir.A05G223400 Gossypium hirsutum HOM05D005452 ORTHO05D006618 2.3e-18 95.9 86 64.0
HanXRQChr12g0371911 Helianthus annuus HOM05D005452 ORTHO05D006618 3.0e-18 95.5 85 62.4
COL.COLO4_23485 Corchorus olitorius HOM05D005452 ORTHO05D006618 5.1e-18 94.7 89 62.9
Prupe.5G046400 Prunus persica HOM05D005452 ORTHO05D006618 5.1e-18 94.7 89 60.7
Hund06040 Selenicereus undatus HOM05D005452 ORTHO05D006618 5.1e-18 94.7 83 63.9
Cpa.g.c31584 Carica papaya HOM05D005452 ORTHO05D006618 8.7e-18 94.0 86 62.8
Ciclev10033123m.g Citrus clementina HOM05D005452 ORTHO05D006618 8.7e-18 94.0 88 61.4
Manes.13G021600 Manihot esculenta HOM05D005452 ORTHO05D006618 8.7e-18 94.0 90 61.1
CiPaw.04G056800 Carya illinoinensis HOM05D005452 ORTHO05D006618 1.1e-17 93.6 58 82.8
THA.LOC104824009 Tarenaya hassleriana HOM05D005452 ORTHO05D006618 1.1e-17 93.6 82 59.8
C07p35420 Brassica napus HOM05D005452 ORTHO05D006618 1.5e-17 93.2 79 62.0
BolC7t44066H Brassica oleracea HOM05D005452 ORTHO05D006618 1.5e-17 93.2 79 62.0
FvH4_5g21170 Fragaria vesca HOM05D005452 ORTHO05D006618 1.5e-17 93.2 85 62.4
FAN04G1087 Fragaria x ananassa HOM05D005452 ORTHO05D006618 1.5e-17 93.2 85 62.4
Oeu049174.1 Olea europaea HOM05D005452 ORTHO05D006618 1.5e-17 93.2 82 62.2
Peaxi162Scf00067g00116 Petunia axillaris HOM05D005452 ORTHO05D006618 1.5e-17 93.2 76 65.8
A06p42060 Brassica napus HOM05D005452 ORTHO05D006618 1.9e-17 92.8 79 62.0
BraA06t27123Z Brassica rapa HOM05D005452 ORTHO05D006618 1.9e-17 92.8 79 62.0
FAN18G0628 Fragaria x ananassa HOM05D005452 ORTHO05D006618 2.5e-17 92.4 85 62.4
THA.LOC104805276 Tarenaya hassleriana HOM05D005452 ORTHO05D006618 2.5e-17 92.4 82 59.8
FAN08G2976 Fragaria x ananassa HOM05D005452 ORTHO05D006618 3.3e-17 92.0 85 61.2
Thhalv10005186m.g Eutrema salsugineum HOM05D005452 ORTHO05D006618 4.3e-17 91.7 82 59.8
SGA_v2.0_scaffold293G47424 Striga asiatica HOM05D005452 ORTHO05D006618 4.3e-17 91.7 73 63.0
FAN13G0782 Fragaria x ananassa HOM05D005452 ORTHO05D006618 5.6e-17 91.3 85 61.2
Sp2g15510 Schrenkiella parvula HOM05D005452 ORTHO05D006618 7.3e-17 90.9 82 61.0
BcaB07g30231 Brassica carinata HOM05D005452 ORTHO05D006618 9.6e-17 90.5 79 60.8
BcaC03g17336 Brassica carinata HOM05D005452 ORTHO05D006618 9.6e-17 90.5 79 60.8
A02p34530 Brassica napus HOM05D005452 ORTHO05D006618 9.6e-17 90.5 79 60.8
C02p52850 Brassica napus HOM05D005452 ORTHO05D006618 9.6e-17 90.5 79 60.8
BraA02t08463Z Brassica rapa HOM05D005452 ORTHO05D006618 9.6e-17 90.5 79 60.8
Haze_12270 Corylus avellana HOM05D004112 ORTHO05D004739 9.6e-17 90.5 118 44.1
Thhalv10005184m.g Eutrema salsugineum HOM05D005452 ORTHO05D006618 9.6e-17 90.5 82 58.5
Lalb_Chr03g0040661 Lupinus albus HOM05D005452 ORTHO05D006618 9.6e-17 90.5 91 58.2
ECA233G5110 Erigeron canadensis HOM05D005452 ORTHO05D006618 1.3e-16 90.1 87 59.8
Carub.0005s0428 Capsella rubella HOM05D005452 ORTHO05D006618 1.6e-16 89.7 82 59.8
Lalb_Chr01g0021741 Lupinus albus HOM05D005452 ORTHO05D006618 2.1e-16 89.4 91 56.0
Eucgr.B03269 Eucalyptus grandis HOM05D005452 ORTHO05D006618 2.8e-16 89.0 83 62.7
SHI03748 Sapria himalayana HOM05D005452 ORTHO05D006618 2.8e-16 89.0 87 57.5
RcHm_v2.0_Chr7g0208311 Rosa chinensis HOM05D005452 ORTHO05D006618 3.6e-16 88.6 87 62.1
Migut.K00615 Erythranthe guttata HOM05D005452 ORTHO05D006618 4.8e-16 88.2 64 71.9
Nn1g08774 Nelumbo nucifera HOM05D005452 ORTHO05D006618 4.8e-16 88.2 68 63.2
unitig_22.g6942 Utricularia gibba HOM05D005452 ORTHO05D006618 4.8e-16 88.2 66 66.7
Cfa009234 Carpinus fangiana HOM05D005452 ORTHO05D006618 6.2e-16 87.8 89 56.2
Aa31LG2G6150 Aethionema arabicum HOM05D005452 ORTHO05D006618 8.1e-16 87.4 82 54.9
ATR0691G211 Amborella trichopoda HOM05D005452 ORTHO05D006618 1.4e-15 86.7 83 55.4
Sabra10G0020400 Salix brachista HOM05D004112 ORTHO05D004739 1.4e-15 86.7 91 53.8
BolC2t11364H Brassica oleracea HOM05D005452 ORTHO05D006618 1.8e-15 86.3 79 58.2
CARHR147370 Cardamine hirsuta HOM05D005452 ORTHO05D006618 2.4e-15 85.9 83 59.0
TWI36G1628 Tripterygium wilfordii HOM05D005452 ORTHO05D006618 2.4e-15 85.9 88 55.7
AT3G26360 Arabidopsis thaliana HOM05D005452 ORTHO05D006618 3.1e-15 85.5 82 58.5
SGA_v2.0_scaffold12G06036 Striga asiatica HOM05D005452 ORTHO05D006618 3.1e-15 85.5 62 69.4
TPR.G32914 Trifolium pratense HOM05D005452 ORTHO05D006618 4.0e-15 85.1 89 56.2
Gohir.D05G226100 Gossypium hirsutum HOM05D005452 ORTHO05D006618 5.3e-15 84.7 53 79.2
MD06G1040200 Malus domestica HOM05D005452 ORTHO05D006618 5.3e-15 84.7 91 50.5
MD09G1284200 Malus domestica HOM05D005452 ORTHO05D006618 5.3e-15 84.7 56 73.2
VMungo1080G1735 Vigna mungo HOM05D005452 ORTHO05D006618 1.2e-14 83.6 91 52.7
AL5G15130 Arabidopsis lyrata HOM05D005452 ORTHO05D006618 1.5e-14 83.2 82 56.1
TWI18G1019 Tripterygium wilfordii HOM05D005452 ORTHO05D006618 1.5e-14 83.2 88 53.4
PSO017G6805 Papaver somniferum HOM05D005452 ORTHO05D006618 2.0e-14 82.8 90 53.3
PSO210G2974 Papaver somniferum HOM05D005452 ORTHO05D006618 2.0e-14 82.8 90 53.3
Potri.010G048600 Populus trichocarpa HOM05D005452 ORTHO05D006618 2.0e-14 82.8 61 68.9
SalBow6G0301 Salvia bowleyana HOM05D005452 ORTHO05D006618 2.0e-14 82.8 65 66.2
SalBow6G0335 Salvia bowleyana HOM05D005452 ORTHO05D006618 2.0e-14 82.8 65 66.2
SalBow6G1267 Salvia bowleyana HOM05D005452 ORTHO05D006618 2.0e-14 82.8 65 66.2
SalBow6G2856 Salvia bowleyana HOM05D005452 ORTHO05D006618 2.0e-14 82.8 65 66.2
SalBow6G4340 Salvia bowleyana HOM05D005452 ORTHO05D006618 2.0e-14 82.8 65 66.2
Lj4g0014743 Lotus japonicus HOM05D005452 ORTHO05D006618 3.4e-14 82.0 91 53.8
Psat5g193600 Pisum sativum HOM05D005452 ORTHO05D006618 4.5e-14 81.6 85 55.3
SalBow6G3385 Salvia bowleyana HOM05D005452 ORTHO05D006618 4.5e-14 81.6 65 64.6
SalBow6G4107 Salvia bowleyana HOM05D005452 ORTHO05D006618 4.5e-14 81.6 63 66.7
SalBow6G4977 Salvia bowleyana HOM05D005452 ORTHO05D006618 4.5e-14 81.6 63 66.7
Glyma.09G244200 Glycine max HOM05D005452 ORTHO05D006618 5.8e-14 81.3 88 55.7
Glyma.18G249300 Glycine max HOM05D005452 ORTHO05D006618 5.8e-14 81.3 88 55.7
VMungo1383G1569 Vigna mungo HOM05D005452 ORTHO05D006618 7.6e-14 80.9 91 52.7
MD02G1109400 Malus domestica HOM05D005452 ORTHO05D006618 1.3e-13 80.1 56 67.9
SalBow6G6484 Salvia bowleyana HOM05D005452 ORTHO05D006618 1.3e-13 80.1 65 64.6
Lj5g0027337 Lotus japonicus HOM05D005452 ORTHO05D006618 1.7e-13 79.7 61 67.2
MBI15_g04991_MAGBIO Magnolia biondii HOM05D005452 ORTHO05D006618 1.7e-13 79.7 61 67.2
Phvul.008G048300 Phaseolus vulgaris HOM05D005452 ORTHO05D006618 2.2e-13 79.3 91 51.6
SalBow6G5661 Salvia bowleyana HOM05D005452 ORTHO05D006618 3.8e-13 78.6 65 64.6
Aqoxy3G01257 Aquilegia oxysepala HOM05D005452 ORTHO05D006618 4.9e-13 78.2 84 52.4
Ca_14963_v3 Cicer arietinum L. HOM05D005452 ORTHO05D006618 6.4e-13 77.8 61 67.2
HPP92_017381 Vanilla planifolia HOM05D005452 ORTHO05D006618 8.4e-13 77.4 59 67.8
CDE10G1265 Ceratophyllum demersum HOM05D005452 ORTHO05D006618 1.1e-12 77.0 85 48.2
Medtr3g464760 Medicago truncatula HOM05D005452 ORTHO05D006618 1.1e-12 77.0 61 65.6
Lj4g0021307 Lotus japonicus HOM05D005452 ORTHO05D006618 2.4e-12 75.9 85 54.1
Zm00001eb217020 Zea mays HOM05D005452 ORTHO05D006618 9.3e-12 73.9 72 54.2
Zm00001eb053730 Zea mays HOM05D005452 ORTHO05D006618 6.0e-11 71.2 78 47.4
Os03g0694700 Oryza sativa ssp. japonica HOM05D005452 ORTHO05D006618 1.8e-10 69.7 84 50.0
MD04G1159200 Malus domestica HOM05D005452 ORTHO05D006618 3.3e-09 65.5 56 60.7
SEGI_39778 Sequoiadendron giganteum HOM05D005452 ORTHO05D006618 3.3e-09 65.5 72 51.4
SEGI_27388 Sequoiadendron giganteum HOM05D005452 ORTHO05D006618 9.6e-09 63.9 54 59.3
MD12G1125700 Malus domestica HOM05D005452 ORTHO05D006618 1.6e-08 63.2 56 58.9
SalBow6G2133 Salvia bowleyana HOM05D009895 ORTHO05D006618 2.8e-08 62.4 77 45.5
Zm00001eb217070 Zea mays HOM05D000876 ORTHO05D000285 4.8e-08 61.6 73 47.9
Nitab4.5_0001978g0030 Nicotiana tabacum HOM05D005452 ORTHO05D006618 6.2e-08 61.2 52 65.4
MBI15_g11303_MAGBIO Magnolia biondii HOM05D005452 ORTHO05D006618 1.0e-05 53.9 64 53.1
SalBow6G0426 Salvia bowleyana HOM05D005452 ORTHO05D006618 1.0e-05 53.9 44 61.4


User provided reference genes

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