Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro01109 Vaccinium macrocarpon HOM05D003551 ORTHO05D004869 0.0e+00 1194.1 702 100.0
Rhsim12G0038300 Rhododendron simsii HOM05D003551 ORTHO05D004869 8.4e-283 976.9 844 69.9
Hma1.2p1_0079F.1_g041260 Hydrangea macrophylla HOM05D003551 ORTHO05D004869 1.1e-253 880.2 826 63.4
Dinv14754 Davidia involucrata HOM05D003551 ORTHO05D004869 1.0e-251 873.6 866 62.0
CSS0025446 Camellia sinensis var. sinensis HOM05D003551 ORTHO05D004869 5.7e-247 857.8 847 65.6
Prupe.1G240500 Prunus persica HOM05D003551 ORTHO05D004869 1.2e-236 823.5 815 59.5
COL.COLO4_23531 Corchorus olitorius HOM05D003551 ORTHO05D004869 1.7e-235 819.7 730 64.4
MD16G1105900 Malus domestica HOM05D003551 ORTHO05D004869 6.5e-235 817.8 829 58.0
GSVIVG01000585001 Vitis vinifera HOM05D003551 ORTHO05D004869 1.1e-234 817.0 741 65.7
Ciclev10030726m.g Citrus clementina HOM05D003551 ORTHO05D004869 1.6e-233 813.1 813 63.5
Manes.12G019500 Manihot esculenta HOM05D003551 ORTHO05D004869 1.2e-231 807.0 818 59.7
QL05p021165 Quercus lobata HOM05D003551 ORTHO05D004869 2.6e-231 805.8 821 59.1
CiPaw.06G064600 Carya illinoinensis HOM05D003551 ORTHO05D004869 5.7e-231 804.7 816 58.9
TWI36G0896 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 1.7e-230 803.1 806 60.8
Gohir.A12G268000 Gossypium hirsutum HOM05D003551 ORTHO05D004869 1.8e-229 799.7 814 58.4
Nitab4.5_0001290g0150 Nicotiana tabacum HOM05D003551 ORTHO05D004869 4.1e-229 798.5 836 56.1
Oeu028968.1 Olea europaea HOM05D003551 ORTHO05D004869 1.2e-228 797.0 807 61.1
Gorai.008G288600 Gossypium raimondii HOM05D003551 ORTHO05D004869 2.7e-228 795.8 814 58.6
Sabra08G0139300 Salix brachista HOM05D003551 ORTHO05D004869 4.5e-228 795.0 830 58.0
Cfa009260 Carpinus fangiana HOM05D003551 ORTHO05D004869 5.9e-228 794.7 746 67.4
Gohir.D12G268400 Gossypium hirsutum HOM05D003551 ORTHO05D004869 1.0e-227 793.9 814 58.6
Oeu014152.4 Olea europaea HOM05D003551 ORTHO05D004869 2.5e-226 789.3 754 63.8
PGSC0003DMG400004723 Solanum tuberosum HOM05D003551 ORTHO05D004869 4.3e-226 788.5 836 56.2
MSTRG.7955 Avicennia marina HOM05D003551 ORTHO05D004869 6.1e-225 784.6 817 62.3
Potri.008G182900 Populus trichocarpa HOM05D003551 ORTHO05D004869 8.0e-225 784.3 805 59.9
Eucgr.H02450 Eucalyptus grandis HOM05D003551 ORTHO05D004869 3.0e-224 782.3 841 56.4
ClCG03G002050 Citrullus lanatus HOM05D003551 ORTHO05D004869 5.2e-224 781.6 818 56.7
Haze_12293 Corylus avellana HOM05D003551 ORTHO05D004869 2.6e-223 779.2 751 67.1
Peaxi162Scf00062g00716 Petunia axillaris HOM05D003551 ORTHO05D004869 9.8e-223 777.3 758 59.8
CANSAT01G3182 Cannabis sativa HOM05D003551 ORTHO05D004869 2.9e-222 775.8 821 56.4
MELO3C022674.2 Cucumis melo HOM05D003551 ORTHO05D004869 4.9e-222 775.0 807 57.4
HanXRQChr08g0208471 Helianthus annuus HOM05D003551 ORTHO05D004869 6.4e-222 774.6 794 59.7
Glyma.11G244500 Glycine max HOM05D003551 ORTHO05D004869 1.1e-221 773.9 826 56.9
Cpa.g.sc33.80 Carica papaya HOM05D003551 ORTHO05D004869 1.4e-221 773.5 847 55.4
Aqoxy3G00657 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 2.4e-221 772.7 805 56.9
CsaV3_1G012700 Cucumis sativus L. HOM05D003551 ORTHO05D004869 3.2e-221 772.3 820 56.2
Phvul.001G256500 Phaseolus vulgaris HOM05D003551 ORTHO05D004869 4.1e-221 771.9 821 57.0
Lsat_1_v5_gn_8_153700 Lactuca sativa HOM05D003551 ORTHO05D004869 7.0e-221 771.2 776 64.7
PSO017G3678 Papaver somniferum HOM05D003551 ORTHO05D004869 7.0e-221 771.2 778 57.5
TWI75G1217 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 7.0e-221 771.2 787 61.4
Nitab4.5_0004725g0020 Nicotiana tabacum HOM05D003551 ORTHO05D004869 1.2e-220 770.4 836 54.9
Aqoxy3G01365 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 3.5e-220 768.8 805 56.8
Hund25033 Selenicereus undatus HOM05D003551 ORTHO05D004869 7.8e-220 767.7 810 60.6
PSO478G3924 Papaver somniferum HOM05D003551 ORTHO05D004869 1.3e-219 766.9 802 57.2
ECA240G1955 Erigeron canadensis HOM05D003551 ORTHO05D004869 3.9e-219 765.4 814 57.7
Sc04g0005980 Simmondsia chinensis HOM05D003551 ORTHO05D004869 6.6e-219 764.6 806 58.2
DCAR_007035 Daucus carota HOM05D003551 ORTHO05D004869 1.9e-218 763.1 836 60.8
VMungo0540G0742 Vigna mungo HOM05D003551 ORTHO05D004869 3.6e-217 758.8 820 57.6
Migut.K00634 Erythranthe guttata HOM05D003551 ORTHO05D004869 1.1e-216 757.3 795 57.2
Solyc12g099890.2 Solanum lycopersicum HOM05D003551 ORTHO05D004869 1.1e-216 757.3 824 55.8
MELO3C026845.2 Cucumis melo HOM05D003551 ORTHO05D004869 1.5e-215 753.4 817 55.3
SalBow2G2049 Salvia bowleyana HOM05D003551 ORTHO05D004869 5.8e-215 751.5 808 57.4
EL10Ac6g14297 Beta vulgaris HOM05D003551 ORTHO05D004869 4.9e-214 748.4 790 61.9
Sopen12g034510 Solanum pennellii HOM05D003551 ORTHO05D004869 1.4e-213 746.9 826 55.6
Ca_25128_v3 Cicer arietinum L. HOM05D003551 ORTHO05D004869 4.1e-213 745.3 818 56.8
Medtr3g086350 Medicago truncatula HOM05D003551 ORTHO05D004869 1.2e-212 743.8 815 56.0
Lj1g0001310 Lotus japonicus HOM05D003551 ORTHO05D004869 1.6e-212 743.4 805 55.5
Lalb_Chr23g0277731 Lupinus albus HOM05D003551 ORTHO05D004869 6.0e-212 741.5 805 58.1
Duzib268G0822 Durio zibethinus HOM05D003551 ORTHO05D004869 1.7e-211 740.0 815 55.8
Cc11_g16150 Coffea canephora HOM05D003551 ORTHO05D004869 2.5e-210 736.1 799 62.1
PGR119G0237 Punica granatum HOM05D003551 ORTHO05D004869 5.6e-210 734.9 830 55.1
Lsat_1_v5_gn_8_153780 Lactuca sativa HOM05D003551 ORTHO05D004869 7.3e-210 734.6 772 59.2
PSO017G4772 Papaver somniferum HOM05D003551 ORTHO05D004869 8.1e-209 731.1 789 55.5
Psat2g160640 Pisum sativum HOM05D003551 ORTHO05D004869 6.8e-208 728.0 821 54.9
CAN.G484.3 Capsicum annuum HOM05D003551 ORTHO05D004869 1.2e-207 727.2 797 56.3
RcHm_v2.0_Chr4g0432421 Rosa chinensis HOM05D003551 ORTHO05D004869 9.9e-207 724.2 804 55.5
Lj6C816T3 Lonicera japonica HOM05D003551 ORTHO05D004869 1.7e-206 723.4 691 66.7
PSO063G2135 Papaver somniferum HOM05D003551 ORTHO05D004869 8.3e-206 721.1 787 55.1
Sed0023493 Sechium edule HOM05D003551 ORTHO05D004869 8.3e-206 721.1 807 54.6
arahy.Tifrunner.gnm1.ann1.A5BQBU Arachis hypogaea HOM05D003551 ORTHO05D004869 1.2e-204 717.2 817 53.5
arahy.Tifrunner.gnm1.ann1.MWLQ6N Arachis hypogaea HOM05D003551 ORTHO05D004869 2.7e-204 716.1 810 54.3
FAN12G2593 Fragaria x ananassa HOM05D003551 ORTHO05D004869 2.7e-204 716.1 800 55.0
SGA_v2.0_scaffold92G28200 Striga asiatica HOM05D003551 ORTHO05D004869 2.7e-204 716.1 833 54.9
TWI34G1512 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 7.8e-204 714.5 763 57.3
FAN22G1040 Fragaria x ananassa HOM05D003551 ORTHO05D004869 3.0e-203 712.6 807 54.6
LjContig00312_ERROPOS870357g0004032 Lotus japonicus HOM05D003551 ORTHO05D004869 3.9e-203 712.2 803 54.8
THA.LOC104809236 Tarenaya hassleriana HOM05D003551 ORTHO05D004869 4.3e-202 708.8 827 56.6
Zm00001eb069620 Zea mays HOM05D003551 ORTHO05D004869 1.4e-200 703.7 838 51.1
HPP92_011125 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.3e-198 697.2 794 54.0
TPR.G5678 Trifolium pratense HOM05D003551 ORTHO05D004869 1.9e-197 693.3 823 54.3
AUR62014112 Chenopodium quinoa HOM05D003551 ORTHO05D004869 3.6e-193 679.1 796 52.4
FAN17G0358 Fragaria x ananassa HOM05D003551 ORTHO05D004869 1.1e-189 667.5 880 49.2
Aa31LG1G1640 Aethionema arabicum HOM05D003551 ORTHO05D004869 5.4e-189 665.2 811 52.2
Thecc.02G267000 Theobroma cacao HOM05D003551 ORTHO05D004869 1.3e-185 654.1 687 61.7
FvH4_4g25230 Fragaria vesca HOM05D003551 ORTHO05D004869 4.8e-185 652.1 750 53.6
SalBow5G3625 Salvia bowleyana HOM05D003551 ORTHO05D004869 3.8e-182 642.5 763 51.8
Thhalv10006828m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 8.4e-182 641.3 812 54.6
AL1G24840 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 6.7e-179 631.7 816 50.5
AT1G13160 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 4.0e-176 622.5 816 53.2
Thhalv10005577m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 7.1e-173 611.7 806 53.3
Sp1g11680 Schrenkiella parvula HOM05D003551 ORTHO05D004869 1.8e-171 607.1 818 52.4
C08p46730 Brassica napus HOM05D003551 ORTHO05D004869 2.8e-169 599.7 817 48.7
A09p63240 Brassica napus HOM05D003551 ORTHO05D004869 4.8e-169 599.0 820 48.3
BolC8t52212H Brassica oleracea HOM05D003551 ORTHO05D004869 1.4e-168 597.4 818 48.5
BraA09t41676Z Brassica rapa HOM05D003551 ORTHO05D004869 2.4e-168 596.7 820 48.2
Carub.0001s1289 Capsella rubella HOM05D003551 ORTHO05D004869 1.3e-166 590.9 816 52.0
Carub.0003s0103 Capsella rubella HOM05D003551 ORTHO05D004869 1.9e-165 587.0 811 49.9
Nn4g22519 Nelumbo nucifera HOM05D003551 ORTHO05D004869 1.6e-164 583.9 652 55.7
Aqoxy6G03052 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 4.6e-164 582.4 743 51.3
AUR62002805 Chenopodium quinoa HOM05D003551 ORTHO05D004869 7.4e-162 575.1 774 47.5
Os04g0630000 Oryza sativa ssp. japonica HOM05D003551 ORTHO05D004869 1.7e-153 547.4 543 59.3
CDE02G2789 Ceratophyllum demersum HOM05D003551 ORTHO05D004869 1.1e-152 544.7 811 45.7
arahy.Tifrunner.gnm1.ann1.5TZZ24 Arachis hypogaea HOM05D003551 ORTHO05D004869 5.3e-152 542.3 724 49.2
arahy.Tifrunner.gnm1.ann1.006XS9 Arachis hypogaea HOM05D003551 ORTHO05D004869 6.9e-152 542.0 724 49.4
arahy.Tifrunner.gnm1.ann1.X9TT4V Arachis hypogaea HOM05D003551 ORTHO05D004869 9.1e-152 541.6 724 49.2
CARHR068650 Cardamine hirsuta HOM05D003551 ORTHO05D004869 2.7e-148 530.0 792 47.3
AL7G20520 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 5.1e-147 525.8 920 42.2
SalBow5G3177 Salvia bowleyana HOM05D003551 ORTHO05D004869 8.2e-145 518.5 775 44.9
Mapoly0084s0017 Marchantia polymorpha HOM05D003551 ORTHO05D004869 1.3e-142 511.1 789 42.6
Pp3c21_560 Physcomitrium patens HOM05D003551 ORTHO05D004869 9.4e-141 505.0 824 42.5
TAR374G0642 Trochodendron aralioides HOM05D003551 ORTHO05D004869 7.0e-136 488.8 467 61.9
AT4G31520 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 9.1e-136 488.4 736 44.6
unitig_22.g6420 Utricularia gibba HOM05D003551 ORTHO05D004869 6.1e-132 475.7 506 57.1
SEGI_37161 Sequoiadendron giganteum HOM05D003551 ORTHO05D004869 6.3e-129 465.7 518 54.6
ATR0824G183 Amborella trichopoda HOM05D003551 ORTHO05D004869 1.6e-124 451.1 437 59.5
Actinidia01370 Actinidia chinensis HOM05D003551 ORTHO05D004869 9.8e-122 441.8 453 66.9
Pp3c21_561 Physcomitrium patens HOM05D003551 ORTHO05D004869 1.7e-118 431.0 694 43.4
CARHR013530 Cardamine hirsuta HOM05D003551 ORTHO05D004869 6.5e-118 429.1 521 50.9
AagrBONN_evm.TU.Sc2ySwM_344.4679 Anthoceros agrestis HOM05D003551 ORTHO05D004869 4.4e-114 416.4 725 39.6
Atru.chr11.1973 Acer truncatum HOM05D003551 ORTHO05D004869 2.7e-111 407.1 422 58.3
QL04p087069 Quercus lobata HOM05D003551 ORTHO05D004869 7.8e-111 405.6 509 51.9
SMO197G0095 Selaginella moellendorffii HOM05D003551 ORTHO05D004869 3.4e-106 390.2 719 37.4
CBR_g23824 Chara braunii HOM05D003551 ORTHO05D004869 7.0e-104 382.5 876 36.3
AUR62020542 Chenopodium quinoa HOM05D003551 ORTHO05D004869 2.1e-92 344.4 846 35.5
Medtr4g006000 Medicago truncatula HOM05D003551 ORTHO05D004869 1.7e-81 308.1 510 41.6
Atru.chr11.1974 Acer truncatum HOM05D003551 ORTHO05D004869 1.1e-77 295.4 349 52.1
MCO05G293 Micromonas commoda HOM05D003551 ORTHO05D004869 1.3e-73 282.0 728 35.7
PRCOL_00005223 Prasinoderma coloniale HOM05D003551 ORTHO05D004869 2.2e-73 281.2 809 32.1
TAR374G0468 Trochodendron aralioides HOM05D003551 ORTHO05D004869 1.6e-71 275.0 324 52.5
TPR.G18550 Trifolium pratense HOM05D003551 ORTHO05D004869 2.8e-68 264.2 517 35.6
Actinidia08115 Actinidia chinensis HOM05D003551 ORTHO05D004869 9.3e-64 249.2 204 69.6
AUR62015661 Chenopodium quinoa HOM05D003551 ORTHO05D004869 2.1e-63 248.1 534 42.5
FAN07G2018 Fragaria x ananassa HOM05D003551 ORTHO05D004869 6.0e-63 246.5 249 57.8
Cre06.g277050 Chlamydomonas reinhardtii HOM05D003551 ORTHO05D004869 1.0e-62 245.7 891 28.4
Medtr4g005970 Medicago truncatula HOM05D003551 ORTHO05D004869 5.6e-61 240.0 430 38.8
Sc04g0005970 Simmondsia chinensis HOM05D003551 ORTHO05D004869 2.1e-60 238.0 389 42.4
SHI17843 Sapria himalayana HOM05D003551 ORTHO05D000023 2.4e-59 234.6 455 36.7
ATR0824G018 Amborella trichopoda HOM05D003551 ORTHO05D004869 1.5e-58 231.9 355 45.1
Actinidia01371 Actinidia chinensis HOM05D002413 ORTHO05D002638 3.4e-58 230.7 200 70.0
HPP92_027088 Vanilla planifolia HOM05D003551 ORTHO05D004869 7.4e-53 213.0 370 42.4
Cfa023305 Carpinus fangiana HOM05D003551 ORTHO05D004869 8.2e-44 183.0 740 27.4
unitig_22.g6421 Utricularia gibba HOM05D003551 ORTHO05D004869 5.7e-37 160.2 138 59.4
HPP92_027649 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.7e-36 158.7 328 38.4
HPP92_028576 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.8e-36 157.1 308 40.6
Zm00001eb279220 Zea mays HOM05D003551 ORTHO05D004869 2.2e-33 148.3 131 64.1
Actinidia08116 Actinidia chinensis HOM05D003551 ORTHO05D004869 4.2e-32 144.1 141 61.0
HPP92_027653 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.1e-29 136.0 217 45.2
BcaB04g19498 Brassica carinata HOM05D003551 ORTHO05D004869 7.4e-29 133.3 137 52.6
HPP92_006539 Vanilla planifolia HOM05D003551 ORTHO05D004869 9.1e-27 126.3 130 55.4
HPP92_027078 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.6e-23 115.5 237 37.6
HPP92_026938 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.6e-23 114.4 293 34.8
HPP92_006576 Vanilla planifolia HOM05D003551 ORTHO05D004869 6.7e-22 110.2 99 61.6
arahy.Tifrunner.gnm1.ann1.LJ7GP5 Arachis hypogaea HOM05D003551 ORTHO05D004869 4.4e-21 107.5 102 62.7
HPP92_006855 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.7e-20 105.5 203 38.9
BcaB06g26385 Brassica carinata HOM05D003551 ORTHO05D016818 1.4e-19 102.4 83 60.2
HPP92_028550 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.1e-19 101.3 111 55.0
HPP92_028371 Vanilla planifolia HOM05D003551 ORTHO05D004869 7.0e-19 100.1 264 36.4
BcaB07g33803 Brassica carinata HOM05D003551 ORTHO05D032399 2.6e-18 98.2 84 59.5
HPP92_006872 Vanilla planifolia HOM05D003551 ORTHO05D016818 5.0e-17 94.0 84 57.1
HPP92_006538 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.2e-16 91.3 125 49.6
HPP92_006854 Vanilla planifolia HOM05D003551 ORTHO05D016818 3.2e-16 91.3 79 59.5
HPP92_027083 Vanilla planifolia HOM05D003551 ORTHO05D004869 5.2e-14 84.0 164 42.7
HPP92_026598 Vanilla planifolia HOM05D003551 ORTHO05D004869 8.8e-14 83.2 80 53.8
HPP92_027994 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.5e-13 82.4 197 36.5
Lsat_1_v5_gn_1_12340 Lactuca sativa HOM05D003551 ORTHO05D004869 4.8e-12 77.4 76 59.2
DCAR_030669 Daucus carota HOM05D001959 ORTHO05D006343 2.0e-10 72.0 57 70.2
Lj6A816T56 Lonicera japonica HOM05D003551 ORTHO05D004869 2.0e-10 72.0 51 76.5
HPP92_028370 Vanilla planifolia HOM05D003551 ORTHO05D016818 2.7e-10 71.6 71 53.5
ECA234G0329 Erigeron canadensis HOM05D000967 ORTHO05D000796 7.7e-10 70.1 95 44.2
Sed0014055 Sechium edule HOM05D003551 ORTHO05D004869 7.7e-10 70.1 64 54.7
HPP92_026825 Vanilla planifolia HOM05D003551 ORTHO05D004343 1.7e-09 68.9 290 31.0
DCAR_030665 Daucus carota HOM05D005171 ORTHO05D006343 6.5e-09 67.0 82 53.7
Migut.C01140 Erythranthe guttata HOM05D003551 ORTHO05D004869 6.5e-09 67.0 211 32.7
Lalb_Chr05g0228661 Lupinus albus HOM05D003551 ORTHO05D048508 1.1e-08 66.2 144 40.3
HPP92_026933 Vanilla planifolia HOM05D015067 ORTHO05D427257 5.5e-08 63.9 41 73.2
HPP92_006540 Vanilla planifolia HOM05D003551 ORTHO05D016818 7.2e-08 63.5 65 52.3
HPP92_028506 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.4e-06 59.3 38 78.9
HPP92_027652 Vanilla planifolia HOM05D003551 ORTHO05D016818 3.0e-06 58.2 57 56.1
arahy.Tifrunner.gnm1.ann1.C8ML0J Arachis hypogaea HOM05D003551 ORTHO05D004869 4.0e-06 57.8 55 58.2
Lsat_1_v5_gn_2_63120 Lactuca sativa HOM05D005044 ORTHO05D006799 4.0e-06 57.8 93 46.2
HPP92_006537 Vanilla planifolia HOM05D003551 ORTHO05D431158 4.0e-06 57.8 67 47.8


User provided reference genes

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