Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro01081 Vaccinium macrocarpon HOM05D005632 ORTHO05D006870 8.6e-38 159.8 81 100.0
Peaxi162Scf00128g00929 Petunia axillaris HOM05D005632 ORTHO05D006870 2.9e-25 118.2 73 82.2
MBI08_g36441_MAGBIO Magnolia biondii HOM05D005632 ORTHO05D006870 1.8e-24 115.5 71 84.5
MBI11_g46744_MAGBIO Magnolia biondii HOM05D005632 ORTHO05D006870 2.4e-24 115.2 69 87.0
Cfa009318 Carpinus fangiana HOM05D005632 ORTHO05D006870 3.2e-24 114.8 70 84.3
Hma1.2p1_1340F.1_g276780 Hydrangea macrophylla HOM05D005632 ORTHO05D006870 3.2e-24 114.8 65 89.2
DCAR_031183 Daucus carota HOM05D005632 ORTHO05D006870 1.2e-23 112.8 70 82.9
HanXRQChr08g0207511 Helianthus annuus HOM05D005632 ORTHO05D006870 5.9e-23 110.5 73 78.1
Peaxi162Scf00797g00115 Petunia axillaris HOM05D005632 ORTHO05D006870 1.7e-22 109.0 69 81.2
MSTRG.522 Avicennia marina HOM05D005632 ORTHO05D006870 3.0e-22 108.2 67 83.6
Haze_12372 Corylus avellana HOM05D005632 ORTHO05D006870 3.0e-22 108.2 65 83.1
BcaB03g15184 Brassica carinata HOM05D005632 ORTHO05D006870 1.5e-21 105.9 67 82.1
QL03p054693 Quercus lobata HOM05D005632 ORTHO05D006870 1.5e-21 105.9 65 80.0
EL10Ac6g13443 Beta vulgaris HOM05D005632 ORTHO05D006870 1.9e-21 105.5 65 83.1
Gohir.A01G155800 Gossypium hirsutum HOM05D005632 ORTHO05D006870 4.3e-21 104.4 65 80.0
AUR62005576 Chenopodium quinoa HOM05D005632 ORTHO05D006870 1.2e-20 102.8 61 85.2
Migut.E00242 Erythranthe guttata HOM05D005632 ORTHO05D006870 1.6e-20 102.4 72 72.2
Dinv10990 Davidia involucrata HOM05D005632 ORTHO05D006870 2.8e-20 101.7 57 91.2
Rhsim12G0029700 Rhododendron simsii HOM05D005632 ORTHO05D006870 3.6e-20 101.3 67 80.6
CiPaw.05G114600 Carya illinoinensis HOM05D005632 ORTHO05D006870 5.2e-19 97.4 73 72.6
Lj4g0009016 Lotus japonicus HOM05D005632 ORTHO05D006870 5.2e-19 97.4 75 66.7
Potri.010G056800 Populus trichocarpa HOM05D005632 ORTHO05D006870 3.4e-18 94.7 59 81.4
Glyma.05G145700 Glycine max HOM05D005632 ORTHO05D006870 5.8e-18 94.0 69 69.6
Hund06068 Selenicereus undatus HOM05D005632 ORTHO05D006870 7.5e-18 93.6 55 81.8
VMungo0251G3265 Vigna mungo HOM05D005632 ORTHO05D006870 1.7e-17 92.4 68 67.6
Glyma.08G102500 Glycine max HOM05D005632 ORTHO05D006870 2.2e-17 92.0 70 67.1
TWI36G0420 Tripterygium wilfordii HOM05D005632 ORTHO05D006870 1.1e-16 89.7 66 66.7
TWI36G0711 Tripterygium wilfordii HOM05D005632 ORTHO05D006870 1.1e-16 89.7 66 66.7
SalBow2G0748 Salvia bowleyana HOM05D005632 ORTHO05D006870 1.2e-15 86.3 75 65.3
MSTRG.13321 Avicennia marina HOM05D005632 ORTHO05D006870 4.6e-15 84.3 56 75.0
Lalb_Chr13g0294171 Lupinus albus HOM05D005632 ORTHO05D006870 4.6e-15 84.3 69 65.2
CSS0014265 Camellia sinensis var. sinensis HOM05D005632 ORTHO05D006870 8.6e-14 80.1 50 88.0
Potri.008G144300 Populus trichocarpa HOM05D002431 ORTHO05D002543 3.6e-12 74.7 67 58.2
VMungo0251G0662 Vigna mungo HOM05D002431 ORTHO05D002543 8.1e-12 73.6 66 57.6
TAR622G0018 Trochodendron aralioides HOM05D005632 ORTHO05D006870 1.8e-11 72.4 34 97.1
Sabra08G0136100 Salix brachista HOM05D005632 ORTHO05D006870 2.3e-11 72.0 73 54.8
TPR.G34762 Trifolium pratense HOM05D002431 ORTHO05D002543 2.3e-11 72.0 65 56.9
Glyma.08G090800 Glycine max HOM05D002431 ORTHO05D002543 5.2e-11 70.9 65 56.9
TAR374G0791 Trochodendron aralioides HOM05D005632 ORTHO05D006870 5.2e-11 70.9 34 94.1
Atru.chr11.1045 Acer truncatum HOM05D002431 ORTHO05D002543 6.8e-11 70.5 65 58.5
CAN.G282.81 Capsicum annuum HOM05D002431 ORTHO05D002543 6.8e-11 70.5 66 59.1
HanXRQChr08g0207501 Helianthus annuus HOM05D005632 ORTHO05D006870 6.8e-11 70.5 37 89.2
Dinv12783 Davidia involucrata HOM05D002431 ORTHO05D002543 8.9e-11 70.1 71 54.9
Psat7g086280 Pisum sativum HOM05D002431 ORTHO05D002543 8.9e-11 70.1 66 54.5
Phvul.002G186400 Phaseolus vulgaris HOM05D002431 ORTHO05D002543 1.5e-10 69.3 65 53.8
Sabra10G0070600 Salix brachista HOM05D002431 ORTHO05D002543 1.5e-10 69.3 62 56.5
Ca_18210_v3 Cicer arietinum L. HOM05D002431 ORTHO05D002543 2.0e-10 68.9 64 54.7
Lj4g0002360 Lotus japonicus HOM05D002431 ORTHO05D002543 2.0e-10 68.9 64 54.7
Sopen05g009890 Solanum pennellii HOM05D005632 ORTHO05D006870 2.0e-10 68.9 39 84.6
PGSC0003DMG400017445 Solanum tuberosum HOM05D005632 ORTHO05D006870 2.0e-10 68.9 39 84.6
AUR62017841 Chenopodium quinoa HOM05D002431 ORTHO05D002543 3.4e-10 68.2 62 54.8
TWI18G1462 Tripterygium wilfordii HOM05D005632 ORTHO05D006870 3.4e-10 68.2 40 77.5
Lj6C822T14 Lonicera japonica HOM05D005632 ORTHO05D006870 7.5e-10 67.0 36 91.7
Lalb_Chr12g0209221 Lupinus albus HOM05D002431 ORTHO05D002543 7.5e-10 67.0 65 52.3
AUR62024154 Chenopodium quinoa HOM05D005632 ORTHO05D006870 9.9e-10 66.6 35 82.9
Duzib248G1043 Durio zibethinus HOM05D005632 ORTHO05D006870 9.9e-10 66.6 34 88.2
Gohir.D01G154266 Gossypium hirsutum HOM05D005632 ORTHO05D006870 9.9e-10 66.6 34 85.3
Gorai.002G191000 Gossypium raimondii HOM05D005632 ORTHO05D006870 9.9e-10 66.6 34 85.3
Nn3g16536 Nelumbo nucifera HOM05D005632 ORTHO05D006870 9.9e-10 66.6 31 96.8
Oeu006354.3 Olea europaea HOM05D002431 ORTHO05D002543 9.9e-10 66.6 69 53.6
Gohir.A05G311200 Gossypium hirsutum HOM05D005632 ORTHO05D006870 1.3e-09 66.2 34 88.2
Lsat_1_v5_gn_8_149761 Lactuca sativa HOM05D005632 ORTHO05D006870 1.3e-09 66.2 37 83.8
MD13G1113300 Malus domestica HOM05D005632 ORTHO05D006870 1.7e-09 65.9 34 85.3
CANSAT01G1127 Cannabis sativa HOM05D005632 ORTHO05D006870 2.9e-09 65.1 31 96.8
CANSAT01G1284 Cannabis sativa HOM05D005632 ORTHO05D006870 2.9e-09 65.1 31 96.8
Dinv28152 Davidia involucrata HOM05D002431 ORTHO05D002543 2.9e-09 65.1 65 53.8
Sabra08G0109300 Salix brachista HOM05D002431 ORTHO05D002543 2.9e-09 65.1 65 52.3
ClCG11G000810 Citrullus lanatus HOM05D002431 ORTHO05D002543 3.7e-09 64.7 61 57.4
TWI77G0990 Tripterygium wilfordii HOM05D002431 ORTHO05D002543 3.7e-09 64.7 65 53.8
Thecc.02G274700 Theobroma cacao HOM05D005632 ORTHO05D006870 4.9e-09 64.3 32 90.6
Atru.chr11.2274 Acer truncatum HOM05D005632 ORTHO05D006870 6.4e-09 63.9 31 93.5
Cpa.g.sc43.34 Carica papaya HOM05D005632 ORTHO05D006870 6.4e-09 63.9 31 90.3
DCAR_030330 Daucus carota HOM05D002431 ORTHO05D002543 6.4e-09 63.9 64 51.6
Sc11g0000640 Simmondsia chinensis HOM05D005632 ORTHO05D006870 6.4e-09 63.9 34 85.3
Cc11_g03240 Coffea canephora HOM05D002431 ORTHO05D002543 8.3e-09 63.5 67 50.7
Actinidia30669 Actinidia chinensis HOM05D005632 ORTHO05D006870 1.1e-08 63.2 31 90.3
MELO3C010730.2 Cucumis melo HOM05D005632 ORTHO05D006870 1.1e-08 63.2 33 84.8
HanXRQChr12g0385931 Helianthus annuus HOM05D005632 ORTHO05D006870 1.1e-08 63.2 35 82.9
Lalb_Chr07g0188081 Lupinus albus HOM05D002431 ORTHO05D002543 1.1e-08 63.2 64 51.6
Medtr8g080180 Medicago truncatula HOM05D005632 ORTHO05D006870 1.1e-08 63.2 41 73.2
CiPaw.05G163000 Carya illinoinensis HOM05D002431 ORTHO05D002543 1.4e-08 62.8 65 50.8
Manes.13G016200 Manihot esculenta HOM05D005632 ORTHO05D006870 1.4e-08 62.8 30 93.3
QL03p041928 Quercus lobata HOM05D002431 ORTHO05D002543 1.4e-08 62.8 66 48.5
Potri.010G098000 Populus trichocarpa HOM05D002431 ORTHO05D002543 1.9e-08 62.4 59 54.2
Eucgr.J01777 Eucalyptus grandis HOM05D002431 ORTHO05D002543 2.4e-08 62.0 64 51.6
Gorai.009G333200 Gossypium raimondii HOM05D005632 ORTHO05D006870 2.4e-08 62.0 31 90.3
Peaxi162Scf00097g01811 Petunia axillaris HOM05D002431 ORTHO05D002543 2.4e-08 62.0 59 59.3
Dinv14805 Davidia involucrata HOM05D005632 ORTHO05D006870 3.2e-08 61.6 28 96.4
Gohir.D05G312000 Gossypium hirsutum HOM05D005632 ORTHO05D006870 3.2e-08 61.6 31 90.3
Oeu020312.1 Olea europaea HOM05D005632 ORTHO05D006870 3.2e-08 61.6 28 96.4
BcaC03g14853 Brassica carinata HOM05D005632 ORTHO05D006870 4.1e-08 61.2 36 80.6
A02p14350 Brassica napus HOM05D005632 ORTHO05D006870 4.1e-08 61.2 36 80.6
BraA02t06496Z Brassica rapa HOM05D005632 ORTHO05D006870 4.1e-08 61.2 36 80.6
CDE05G0828 Ceratophyllum demersum HOM05D002431 ORTHO05D002543 4.1e-08 61.2 65 52.3
Lsat_1_v5_gn_4_26141 Lactuca sativa HOM05D002431 ORTHO05D002543 4.1e-08 61.2 62 53.2
arahy.Tifrunner.gnm1.ann1.H5LZNT Arachis hypogaea HOM05D002431 ORTHO05D002543 5.4e-08 60.8 58 55.2
arahy.Tifrunner.gnm1.ann1.PUF5Z4 Arachis hypogaea HOM05D002431 ORTHO05D002543 5.4e-08 60.8 58 55.2
Duzib251G0024 Durio zibethinus HOM05D005632 ORTHO05D006870 5.4e-08 60.8 30 90.0
Nitab4.5_0000240g0120 Nicotiana tabacum HOM05D005632 ORTHO05D006870 5.4e-08 60.8 29 89.7
COL.COLO4_12811 Corchorus olitorius HOM05D005632 ORTHO05D006870 7.1e-08 60.5 31 87.1
MD16G1112600 Malus domestica HOM05D005632 ORTHO05D006870 7.1e-08 60.5 30 86.7
Prupe.1G232800 Prunus persica HOM05D005632 ORTHO05D006870 7.1e-08 60.5 30 86.7
BcaB05g24299 Brassica carinata HOM05D005632 ORTHO05D006870 9.2e-08 60.1 35 82.9
CDE05G1253 Ceratophyllum demersum HOM05D002431 ORTHO05D002543 9.2e-08 60.1 65 49.2
Sed0026720 Sechium edule HOM05D005632 ORTHO05D006870 9.2e-08 60.1 30 83.3
SGA_v2.0_scaffold223G42825 Striga asiatica HOM05D002431 ORTHO05D002543 9.2e-08 60.1 68 45.6
Cc11_g16640 Coffea canephora HOM05D005632 ORTHO05D006870 1.2e-07 59.7 28 89.3
Eucgr.B03464 Eucalyptus grandis HOM05D005632 ORTHO05D006870 1.2e-07 59.7 29 93.1
Sed0013249 Sechium edule HOM05D002431 ORTHO05D002543 1.2e-07 59.7 57 56.1
BolC2t08463H Brassica oleracea HOM05D005632 ORTHO05D006870 3.5e-07 58.2 36 77.8
CsaV3_5G012590 Cucumis sativus L. HOM05D002431 ORTHO05D002543 3.5e-07 58.2 57 54.4
CsaV3_5G012800 Cucumis sativus L. HOM05D002431 ORTHO05D002543 3.5e-07 58.2 57 54.4
HPP92_001245 Vanilla planifolia HOM05D005632 ORTHO05D006870 3.5e-07 58.2 34 76.5
HPP92_001261 Vanilla planifolia HOM05D005632 ORTHO05D006870 3.5e-07 58.2 34 76.5
THA.LOC104825517 Tarenaya hassleriana HOM05D005632 ORTHO05D006870 4.6e-07 57.8 29 89.7
GSVIVG01010242001 Vitis vinifera HOM05D002431 ORTHO05D002543 4.6e-07 57.8 72 45.8
FvH4_4g24210 Fragaria vesca HOM05D005632 ORTHO05D006870 6.0e-07 57.4 30 83.3
FAN12G4104 Fragaria x ananassa HOM05D005632 ORTHO05D006870 6.0e-07 57.4 30 83.3
FAN17G2842 Fragaria x ananassa HOM05D005632 ORTHO05D006870 6.0e-07 57.4 30 83.3
FAN22G2239 Fragaria x ananassa HOM05D005632 ORTHO05D006870 6.0e-07 57.4 30 83.3
PGR102G1157 Punica granatum HOM05D005632 ORTHO05D006870 6.0e-07 57.4 27 92.6
RcHm_v2.0_Chr4g0431051 Rosa chinensis HOM05D005632 ORTHO05D006870 6.0e-07 57.4 30 83.3
FAN07G2757 Fragaria x ananassa HOM05D005632 ORTHO05D006870 7.8e-07 57.0 30 83.3
Aa31sc48G70 Aethionema arabicum HOM05D005632 ORTHO05D006870 1.0e-06 56.6 29 82.8
Aqoxy5G03509 Aquilegia oxysepala HOM05D005632 ORTHO05D006870 1.0e-06 56.6 27 88.9
Solyc01g008180.3 Solanum lycopersicum HOM05D002431 ORTHO05D002543 1.0e-06 56.6 57 56.1
CsaV3_2G025340 Cucumis sativus L. HOM05D005632 ORTHO05D006870 1.3e-06 56.2 29 86.2
Sabra10G0048400 Salix brachista HOM05D005632 ORTHO05D006870 1.3e-06 56.2 27 92.6
Sopen01g003720 Solanum pennellii HOM05D002431 ORTHO05D002543 1.3e-06 56.2 55 58.2
TAR627G0788 Trochodendron aralioides HOM05D002431 ORTHO05D002543 1.3e-06 56.2 58 51.7
TAR382G0001 Trochodendron aralioides HOM05D002431 ORTHO05D002543 1.7e-06 55.8 64 50.0
Lalb_Chr07g0187331 Lupinus albus HOM05D005632 ORTHO05D006870 2.3e-06 55.5 35 77.1
THA.LOC104824101 Tarenaya hassleriana HOM05D002431 ORTHO05D002543 3.0e-06 55.1 58 51.7
Gohir.A01G145800 Gossypium hirsutum HOM05D002431 ORTHO05D002543 3.9e-06 54.7 65 49.2
PSO063G5034 Papaver somniferum HOM05D005632 ORTHO05D006870 3.9e-06 54.7 29 79.3
PSO782G1057 Papaver somniferum HOM05D005632 ORTHO05D006870 3.9e-06 54.7 29 79.3
Manes.10G068300 Manihot esculenta HOM05D002431 ORTHO05D002543 5.1e-06 54.3 64 48.4
Sed0020525 Sechium edule HOM05D005632 ORTHO05D006870 5.1e-06 54.3 35 74.3
Migut.K00701 Erythranthe guttata HOM05D005632 ORTHO05D006870 6.6e-06 53.9 28 89.3
Sp5g22610 Schrenkiella parvula HOM05D005632 ORTHO05D006870 6.6e-06 53.9 28 82.1
Phvul.002G175800 Phaseolus vulgaris HOM05D005632 ORTHO05D006870 8.6e-06 53.5 31 80.6


User provided reference genes

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