Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro01046 Vaccinium macrocarpon HOM05D005688 ORTHO05D006630 8.1e-205 716.8 363 100.0
Rhsim12G0023600 Rhododendron simsii HOM05D005688 ORTHO05D006630 4.1e-164 581.6 366 80.1
Hma1.2p1_0065F.1_g035040 Hydrangea macrophylla HOM05D005688 ORTHO05D006630 4.4e-150 535.0 366 74.9
Lj6A830T28 Lonicera japonica HOM05D005688 ORTHO05D006630 4.5e-147 525.0 370 73.2
CSS0038243 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 3.8e-146 521.9 370 71.4
Dinv17591 Davidia involucrata HOM05D005688 ORTHO05D006630 6.5e-146 521.2 367 72.5
CSS0036763 Camellia sinensis var. sinensis HOM05D005688 ORTHO05D006630 8.6e-146 520.8 369 72.9
Dinv11693 Davidia involucrata HOM05D005688 ORTHO05D006630 1.2e-144 516.9 366 73.2
Nitab4.5_0002277g0010 Nicotiana tabacum HOM05D005688 ORTHO05D006630 2.8e-144 515.8 374 70.6
Actinidia09624 Actinidia chinensis HOM05D005688 ORTHO05D006630 4.7e-144 515.0 365 71.0
Nitab4.5_0000251g0050 Nicotiana tabacum HOM05D005688 ORTHO05D006630 2.3e-143 512.7 376 69.7
Lsat_1_v5_gn_4_280 Lactuca sativa HOM05D005688 ORTHO05D006630 6.8e-143 511.1 372 70.7
Sopen05g011970 Solanum pennellii HOM05D005688 ORTHO05D006630 7.5e-142 507.7 373 70.2
PGSC0003DMG400010801 Solanum tuberosum HOM05D005688 ORTHO05D006630 7.5e-142 507.7 373 70.2
Haze_12451 Corylus avellana HOM05D005688 ORTHO05D006630 1.7e-141 506.5 376 70.2
Solyc05g015980.3 Solanum lycopersicum HOM05D005688 ORTHO05D006630 3.7e-141 505.4 373 70.0
Cfa009390 Carpinus fangiana HOM05D005688 ORTHO05D006630 1.8e-140 503.1 376 69.9
Manes.12G008200 Manihot esculenta HOM05D005688 ORTHO05D006630 2.0e-139 499.6 376 69.4
Prupe.1G222300 Prunus persica HOM05D005688 ORTHO05D006630 2.0e-139 499.6 377 68.2
DCAR_024659 Daucus carota HOM05D005688 ORTHO05D006630 4.5e-139 498.4 363 70.0
FvH4_4g23370 Fragaria vesca HOM05D005688 ORTHO05D006630 1.3e-138 496.9 380 66.8
FAN12G1631 Fragaria x ananassa HOM05D005688 ORTHO05D006630 1.3e-138 496.9 380 66.8
FAN07G0693 Fragaria x ananassa HOM05D005688 ORTHO05D006630 2.9e-138 495.7 381 66.9
TAR629G3099 Trochodendron aralioides HOM05D005688 ORTHO05D006630 3.8e-138 495.4 371 68.7
MD16G1123300 Malus domestica HOM05D005688 ORTHO05D006630 8.6e-138 494.2 376 68.4
FAN17G3098 Fragaria x ananassa HOM05D005688 ORTHO05D006630 4.3e-137 491.9 381 66.4
Potri.001G059700 Populus trichocarpa HOM05D005688 ORTHO05D006630 4.3e-137 491.9 372 68.5
HanXRQChr17g0568911 Helianthus annuus HOM05D005688 ORTHO05D006630 5.6e-137 491.5 368 68.5
RcHm_v2.0_Chr4g0429761 Rosa chinensis HOM05D005688 ORTHO05D006630 3.6e-136 488.8 380 66.8
SalBow2G0527 Salvia bowleyana HOM05D005688 ORTHO05D006630 3.6e-136 488.8 363 69.4
Duzib251G0174 Durio zibethinus HOM05D005688 ORTHO05D006630 6.1e-136 488.0 375 67.5
Ciclev10032000m.g Citrus clementina HOM05D005688 ORTHO05D006630 8.0e-136 487.6 376 66.8
Peaxi162Scf00128g01523 Petunia axillaris HOM05D005688 ORTHO05D006630 2.3e-135 486.1 378 67.5
MSTRG.481 Avicennia marina HOM05D005688 ORTHO05D006630 3.0e-135 485.7 362 68.0
THA.LOC104810209 Tarenaya hassleriana HOM05D005688 ORTHO05D006630 3.0e-135 485.7 378 67.7
Migut.E00005 Erythranthe guttata HOM05D005688 ORTHO05D006630 8.9e-135 484.2 371 67.1
Thecc.02G201300 Theobroma cacao HOM05D005688 ORTHO05D006630 8.9e-135 484.2 377 67.1
TWI75G1512 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 8.9e-135 484.2 380 66.6
CANSAT80G0816 Cannabis sativa HOM05D005688 ORTHO05D006630 1.2e-134 483.8 370 67.3
arahy.Tifrunner.gnm1.ann1.97E8EB Arachis hypogaea HOM05D005688 ORTHO05D006630 2.0e-134 483.0 386 69.7
arahy.Tifrunner.gnm1.ann1.N9VQT0 Arachis hypogaea HOM05D005688 ORTHO05D006630 2.0e-134 483.0 386 69.7
CiPaw.05G106800 Carya illinoinensis HOM05D005688 ORTHO05D006630 2.0e-134 483.0 379 66.5
Phvul.008G017000 Phaseolus vulgaris HOM05D005688 ORTHO05D006630 2.0e-134 483.0 376 67.0
ECA234G1377 Erigeron canadensis HOM05D005688 ORTHO05D006630 3.4e-134 482.3 366 67.5
QL03p051598 Quercus lobata HOM05D005688 ORTHO05D006630 5.8e-134 481.5 385 65.5
Potri.003G168300 Populus trichocarpa HOM05D005688 ORTHO05D006630 7.5e-134 481.1 373 67.3
Lj1g0000862 Lotus japonicus HOM05D005688 ORTHO05D006630 1.3e-133 480.3 380 69.5
Lalb_Chr10g0092021 Lupinus albus HOM05D005688 ORTHO05D006630 1.3e-133 480.3 381 65.9
TWI36G1544 Tripterygium wilfordii HOM05D005688 ORTHO05D006630 2.2e-133 479.6 380 66.6
Glyma.18G284500 Glycine max HOM05D005688 ORTHO05D006630 4.9e-133 478.4 379 68.9
Sc04g0010310 Simmondsia chinensis HOM05D005688 ORTHO05D006630 4.9e-133 478.4 372 68.0
Gohir.A04G100300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 2.4e-132 476.1 374 65.5
Lalb_Chr17g0336391 Lupinus albus HOM05D005688 ORTHO05D006630 2.4e-132 476.1 371 65.5
Ca_07133_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 3.2e-132 475.7 381 65.6
Ca_28122_v3 Cicer arietinum L. HOM05D005688 ORTHO05D006630 3.2e-132 475.7 381 65.6
Glyma.02G097000 Glycine max HOM05D005688 ORTHO05D006630 5.4e-132 474.9 379 69.9
Actinidia39795 Actinidia chinensis HOM05D005688 ORTHO05D006630 7.0e-132 474.6 344 70.3
Gohir.D04G139300 Gossypium hirsutum HOM05D005688 ORTHO05D006630 7.0e-132 474.6 374 65.5
TAR371G0171 Trochodendron aralioides HOM05D005688 ORTHO05D006630 7.0e-132 474.6 371 67.7
C09p63990 Brassica napus HOM05D000918 ORTHO05D006630 1.2e-131 473.8 377 63.1
MELO3C017746.2 Cucumis melo HOM05D005688 ORTHO05D006630 1.2e-131 473.8 380 65.8
Gorai.012G124400 Gossypium raimondii HOM05D005688 ORTHO05D006630 1.2e-131 473.8 374 65.8
PGR102G0765 Punica granatum HOM05D005688 ORTHO05D006630 1.2e-131 473.8 374 65.2
CARHR200370 Cardamine hirsuta HOM05D005688 ORTHO05D006630 2.0e-131 473.0 384 63.0
BolC9t59237H Brassica oleracea HOM05D005688 ORTHO05D006630 2.7e-131 472.6 381 63.0
BraA10t44572Z Brassica rapa HOM05D005688 ORTHO05D006630 3.5e-131 472.2 383 62.7
AL6G23700 Arabidopsis lyrata HOM05D005688 ORTHO05D006630 6.0e-131 471.5 384 62.8
BraA03t09920Z Brassica rapa HOM05D000918 ORTHO05D006630 7.8e-131 471.1 384 62.5
CsaV3_4G002970 Cucumis sativus L. HOM05D005688 ORTHO05D006630 1.0e-130 470.7 382 65.4
Hund06107 Selenicereus undatus HOM05D005688 ORTHO05D006630 2.3e-130 469.5 377 66.6
C03p06760 Brassica napus HOM05D000918 ORTHO05D006630 5.0e-130 468.4 384 62.2
BolC3t13183H Brassica oleracea HOM05D000918 ORTHO05D006630 5.0e-130 468.4 384 62.2
Carub.0006s1127 Capsella rubella HOM05D005688 ORTHO05D006630 1.1e-129 467.2 383 62.4
A03p05810 Brassica napus HOM05D000918 ORTHO05D000791 1.9e-129 466.5 384 61.7
Medtr7g022390 Medicago truncatula HOM05D005688 ORTHO05D006630 1.9e-129 466.5 385 63.9
Aa31LG3G14570 Aethionema arabicum HOM05D005688 ORTHO05D006630 2.5e-129 466.1 382 62.8
COL.COLO4_27347 Corchorus olitorius HOM05D005688 ORTHO05D006630 7.3e-129 464.5 381 66.4
Sp6g30880 Schrenkiella parvula HOM05D005688 ORTHO05D006630 9.5e-129 464.2 388 62.4
AT5G13100 Arabidopsis thaliana HOM05D005688 ORTHO05D006630 1.2e-128 463.8 384 61.5
A10p25100 Brassica napus HOM05D000918 ORTHO05D006630 1.2e-128 463.8 376 61.7
Thhalv10013944m.g Eutrema salsugineum HOM05D005688 ORTHO05D006630 1.2e-128 463.8 385 62.6
Duzib248G1308 Durio zibethinus HOM05D005688 ORTHO05D006630 8.0e-128 461.1 377 64.7
Sed0014060 Sechium edule HOM05D005688 ORTHO05D006630 1.2e-126 457.2 379 63.6
MBI07_g18747_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 7.5e-126 454.5 373 63.0
Aqoxy3G01629 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 2.9e-125 452.6 369 64.2
Sabra03G0123400 Salix brachista HOM05D005688 ORTHO05D006630 3.7e-125 452.2 455 55.8
Nn3g16394 Nelumbo nucifera HOM05D005688 ORTHO05D006630 4.9e-125 451.8 370 64.1
Eucgr.B03525 Eucalyptus grandis HOM05D005688 ORTHO05D006630 6.4e-125 451.4 382 62.3
TPR.G2946 Trifolium pratense HOM05D005688 ORTHO05D006630 1.4e-124 450.3 370 62.7
CAN.G163.3 Capsicum annuum HOM05D005688 ORTHO05D006630 2.7e-123 446.0 347 65.7
PSO017G1106 Papaver somniferum HOM05D005688 ORTHO05D006630 3.0e-122 442.6 387 61.0
AUR62028899 Chenopodium quinoa HOM05D005688 ORTHO05D006630 5.0e-122 441.8 374 62.0
PSO478G0501 Papaver somniferum HOM05D005688 ORTHO05D006630 6.6e-122 441.4 390 60.8
unitig_26.g10416 Utricularia gibba HOM05D005688 ORTHO05D006630 7.3e-121 438.0 376 61.4
EL10Ac6g13540 Beta vulgaris HOM05D005688 ORTHO05D006630 1.6e-120 436.8 378 61.1
BcaB01g05377 Brassica carinata HOM05D005688 ORTHO05D006630 1.1e-119 434.1 385 59.0
CDE05G3530 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 1.5e-118 430.3 370 61.1
CDE05G2516 Ceratophyllum demersum HOM05D005688 ORTHO05D006630 2.2e-117 426.4 370 60.8
Sed0011472 Sechium edule HOM05D005688 ORTHO05D006630 4.9e-117 425.2 343 64.4
Sabra01G0042800 Salix brachista HOM05D005688 ORTHO05D006630 3.2e-116 422.5 342 67.0
ClCG07G015390 Citrullus lanatus HOM05D005688 ORTHO05D006630 4.1e-116 422.2 348 64.7
Psat3g187080 Pisum sativum HOM05D005688 ORTHO05D006630 1.1e-113 414.1 352 62.5
ATR0582G145 Amborella trichopoda HOM05D005688 ORTHO05D006630 3.6e-112 409.1 368 59.2
Zm00001eb127020 Zea mays HOM05D005688 ORTHO05D006630 3.4e-110 402.5 380 55.5
Ah.03g135940 Amaranthus hybridus HOM05D005688 ORTHO05D006630 2.9e-109 399.4 383 57.2
Os01g0102500 Oryza sativa ssp. japonica HOM05D005688 ORTHO05D006630 1.6e-107 393.7 364 56.3
CiPaw.06G105500 Carya illinoinensis HOM05D005688 ORTHO05D006630 5.8e-102 375.2 307 64.8
SEGI_34677 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 9.9e-102 374.4 344 56.1
Ah.02g130750 Amaranthus hybridus HOM05D005688 ORTHO05D006630 2.9e-101 372.9 372 55.4
SEGI_28374 Sequoiadendron giganteum HOM05D005688 ORTHO05D006630 3.8e-101 372.5 325 57.8
HPP92_011533 Vanilla planifolia HOM05D005688 ORTHO05D006630 1.6e-99 367.1 342 57.9
Manes.13G008600 Manihot esculenta HOM05D005688 ORTHO05D006630 1.0e-98 364.4 307 64.5
BcaC04g19152 Brassica carinata HOM05D005688 ORTHO05D006630 8.7e-98 361.3 377 55.7
Cc11_g17240 Coffea canephora HOM05D005688 ORTHO05D006630 4.3e-97 359.0 204 82.8
AUR62005654 Chenopodium quinoa HOM05D005688 ORTHO05D006630 5.6e-97 358.6 248 73.0
Cpa.g.sc99.54 Carica papaya HOM05D005688 ORTHO05D006630 8.1e-96 354.8 204 83.3
Mapoly0015s0197 Marchantia polymorpha HOM05D005688 ORTHO05D006630 1.1e-95 354.4 365 52.6
Atru.chr11.2370 Acer truncatum HOM05D005688 ORTHO05D006630 9.0e-95 351.3 308 61.7
HPP92_011539 Vanilla planifolia HOM05D005688 ORTHO05D006630 9.9e-94 347.8 372 51.6
GSVIVG01000906001 Vitis vinifera HOM05D005688 ORTHO05D006630 2.2e-93 346.7 204 80.9
MBI04_g07882_MAGBIO Magnolia biondii HOM05D005688 ORTHO05D006630 7.1e-92 341.7 363 49.0
ATR0579G080 Amborella trichopoda HOM05D005688 ORTHO05D006630 1.6e-91 340.5 331 52.3
AagrBONN_evm.TU.Sc2ySwM_340.298 Anthoceros agrestis HOM05D005688 ORTHO05D006630 3.0e-90 336.3 326 54.0
CBR_g40425 Chara braunii HOM05D005688 ORTHO05D006630 1.9e-89 333.6 311 56.9
SMO367G0614 Selaginella moellendorffii HOM05D005688 ORTHO05D006630 1.3e-85 320.9 325 49.8
unitig_8.g2899 Utricularia gibba HOM05D005688 ORTHO05D006630 7.7e-70 268.5 153 81.7
Actinidia30626 Actinidia chinensis HOM05D001095 ORTHO05D000976 1.1e-65 254.6 216 63.4
Actinidia08051 Actinidia chinensis HOM05D005688 ORTHO05D006630 1.7e-64 250.8 126 92.1
Oeu012651.1 Olea europaea HOM05D005688 ORTHO05D006630 1.2e-54 218.0 215 54.0
Nn4g22254 Nelumbo nucifera HOM05D005688 ORTHO05D006630 4.5e-46 189.5 100 86.0
unitig_8.g2900 Utricularia gibba HOM05D005688 ORTHO05D006630 2.5e-44 183.7 187 55.1
Actinidia34019 Actinidia chinensis HOM05D005688 ORTHO05D006630 3.2e-44 183.3 91 89.0
Actinidia08052 Actinidia chinensis HOM05D005688 ORTHO05D006630 1.2e-33 148.3 166 54.2
GSVIVG01010535001 Vitis vinifera HOM05D005688 ORTHO05D006630 4.1e-31 139.8 104 70.2
Cpa.g.sc99.53 Carica papaya HOM05D005688 ORTHO05D006630 5.4e-31 139.4 150 54.0
BcaB03g14943 Brassica carinata HOM05D005688 ORTHO05D006630 1.2e-27 128.3 73 76.7
BcaB07g33260 Brassica carinata HOM05D005688 ORTHO05D006630 2.8e-27 127.1 73 75.3
Aqoxy1G03766 Aquilegia oxysepala HOM05D005688 ORTHO05D006630 2.6e-25 120.6 160 46.9
VMungo1215G2942 Vigna mungo HOM05D005688 ORTHO05D006630 1.3e-24 118.2 98 62.2
VMungo1383G3355 Vigna mungo HOM05D005688 ORTHO05D006630 4.9e-24 116.3 244 37.7
QL06p005212 Quercus lobata HOM05D005688 ORTHO05D006630 3.9e-13 80.1 43 83.7
Ah.02g130760 Amaranthus hybridus HOM05D005688 ORTHO05D006630 4.7e-11 73.2 128 35.2


User provided reference genes

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