Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00998 Vaccinium macrocarpon HOM05D005394 ORTHO05D006909 0.0e+00 1595.5 931 100.0
CSS0015023 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 6.1e-305 1050.8 944 68.5
CSS0042292 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 1.5e-303 1046.2 941 68.4
Dinv07076 Davidia involucrata HOM05D005394 ORTHO05D006909 9.7e-303 1043.5 875 68.5
TAR626G0164 Trochodendron aralioides HOM05D005394 ORTHO05D006909 1.7e-294 1016.1 939 61.2
GSVIVG01020852001 Vitis vinifera HOM05D005394 ORTHO05D006909 8.3e-294 1013.8 927 64.4
Thecc.04G175300 Theobroma cacao HOM05D005394 ORTHO05D006909 3.5e-292 1008.4 928 64.0
Aqoxy1G01759 Aquilegia oxysepala HOM05D005394 ORTHO05D006909 1.4e-288 996.5 931 60.9
PSO675G3098 Papaver somniferum HOM05D005394 ORTHO05D006909 2.3e-288 995.7 961 60.6
Nn8g41245 Nelumbo nucifera HOM05D005394 ORTHO05D006909 6.8e-288 994.2 933 62.1
Psat0s1569g0040 Pisum sativum HOM05D005394 ORTHO05D006909 2.6e-287 992.3 928 60.6
Sopen10g003630 Solanum pennellii HOM05D005394 ORTHO05D006909 2.6e-287 992.3 942 61.9
Potri.005G203900 Populus trichocarpa HOM05D005394 ORTHO05D006909 3.4e-287 991.9 928 62.8
Ca_06271_v3 Cicer arietinum L. HOM05D005394 ORTHO05D006909 9.8e-287 990.3 928 61.0
PSO541G2917 Papaver somniferum HOM05D005394 ORTHO05D006909 1.3e-286 989.9 961 60.4
Solyc10g007720.4 Solanum lycopersicum HOM05D005394 ORTHO05D006909 1.7e-286 989.6 942 61.5
CiPaw.03G191600 Carya illinoinensis HOM05D005394 ORTHO05D006909 3.7e-286 988.4 855 69.8
MD09G1149900 Malus domestica HOM05D005394 ORTHO05D006909 8.3e-286 987.3 913 61.9
Medtr5g091250 Medicago truncatula HOM05D005394 ORTHO05D006909 1.8e-285 986.1 928 60.3
Prupe.3G175300 Prunus persica HOM05D005394 ORTHO05D006909 2.4e-285 985.7 922 60.6
Sabra05G0154700 Salix brachista HOM05D005394 ORTHO05D006909 2.4e-285 985.7 928 60.3
PGSC0003DMG400021243 Solanum tuberosum HOM05D005394 ORTHO05D006909 4.1e-285 984.9 942 61.6
CANSAT64G3008 Cannabis sativa HOM05D005394 ORTHO05D006909 7.0e-285 984.2 929 63.8
Peaxi162Scf00035g02520 Petunia axillaris HOM05D005394 ORTHO05D006909 7.0e-285 984.2 929 62.9
Nitab4.5_0003104g0050 Nicotiana tabacum HOM05D005394 ORTHO05D006909 1.6e-284 983.0 935 63.2
Ciclev10030699m.g Citrus clementina HOM05D005394 ORTHO05D006909 2.0e-284 982.6 932 60.8
Gohir.A10G140600 Gossypium hirsutum HOM05D005394 ORTHO05D006909 2.0e-284 982.6 932 63.2
Cfa023066 Carpinus fangiana HOM05D005394 ORTHO05D006909 2.7e-284 982.2 855 66.5
Atru.BG.36.p Acer truncatum HOM05D005394 ORTHO05D006909 1.7e-283 979.5 865 63.1
CsaV3_6G013780 Cucumis sativus L. HOM05D005394 ORTHO05D006909 1.7e-283 979.5 919 61.7
Gorai.011G139100 Gossypium raimondii HOM05D005394 ORTHO05D006909 2.3e-283 979.2 932 63.3
Ah.01g001930 Amaranthus hybridus HOM05D005394 ORTHO05D006909 8.6e-283 977.2 925 65.2
COL.COLO4_10088 Corchorus olitorius HOM05D005394 ORTHO05D006909 1.1e-282 976.9 932 62.9
Gohir.D10G126100 Gossypium hirsutum HOM05D005394 ORTHO05D006909 2.5e-282 975.7 932 63.2
EL10Ac9g22847 Beta vulgaris HOM05D005394 ORTHO05D006909 5.5e-282 974.5 928 60.0
Sc06g0007690 Simmondsia chinensis HOM05D005394 ORTHO05D006909 9.5e-282 973.8 911 59.9
MBI16_g26174_MAGBIO Magnolia biondii HOM05D005394 ORTHO05D006909 3.6e-281 971.8 932 58.6
Nitab4.5_0002209g0020 Nicotiana tabacum HOM05D005394 ORTHO05D006909 6.1e-281 971.1 935 63.7
Lalb_Chr17g0348211 Lupinus albus HOM05D005394 ORTHO05D006909 8.0e-281 970.7 853 63.3
Phvul.008G193314 Phaseolus vulgaris HOM05D005394 ORTHO05D006909 8.0e-281 970.7 926 61.8
THA.LOC104825567 Tarenaya hassleriana HOM05D005394 ORTHO05D006909 3.0e-280 968.8 853 64.2
LjContig00049g0014840 Lotus japonicus HOM05D005394 ORTHO05D006909 4.0e-280 968.4 926 64.1
MD17G1137000 Malus domestica HOM05D005394 ORTHO05D006909 1.2e-279 966.8 920 63.6
DCAR_009812 Daucus carota HOM05D005394 ORTHO05D006909 2.0e-279 966.1 927 60.6
Potri.002G058300 Populus trichocarpa HOM05D005394 ORTHO05D006909 2.0e-279 966.1 922 63.6
Sed0013102 Sechium edule HOM05D005394 ORTHO05D006909 2.0e-279 966.1 940 62.2
MELO3C019674.2 Cucumis melo HOM05D005394 ORTHO05D006909 5.7e-279 964.5 944 61.3
RcHm_v2.0_Chr2g0151781 Rosa chinensis HOM05D005394 ORTHO05D006909 5.7e-279 964.5 916 59.6
VMungo0647G2040 Vigna mungo HOM05D005394 ORTHO05D006909 7.5e-279 964.1 926 61.7
ClCG02G018460 Citrullus lanatus HOM05D005394 ORTHO05D006909 9.8e-279 963.8 949 59.7
arahy.Tifrunner.gnm1.ann1.3I6JR3 Arachis hypogaea HOM05D005394 ORTHO05D006909 2.9e-278 962.2 939 60.0
FvH4_6g38530 Fragaria vesca HOM05D005394 ORTHO05D006909 3.7e-278 961.8 916 58.8
FAN14G2062 Fragaria x ananassa HOM05D005394 ORTHO05D006909 3.7e-278 961.8 916 58.8
HanXRQChr16g0503181 Helianthus annuus HOM05D005394 ORTHO05D006909 4.9e-278 961.4 935 60.1
Lsat_1_v5_gn_8_142320 Lactuca sativa HOM05D005394 ORTHO05D006909 4.9e-278 961.4 872 63.6
Sed0020842 Sechium edule HOM05D005394 ORTHO05D006909 6.3e-278 961.1 920 59.7
Glyma.14G029500 Glycine max HOM05D005394 ORTHO05D006909 1.4e-277 959.9 928 62.1
Manes.01G130300 Manihot esculenta HOM05D005394 ORTHO05D006909 1.4e-277 959.9 856 64.3
Glyma.02G286300 Glycine max HOM05D005394 ORTHO05D006909 9.2e-277 957.2 926 63.3
Cc05_g09680 Coffea canephora HOM05D005394 ORTHO05D006909 1.2e-276 956.8 937 62.4
HanXRQChr09g0276121 Helianthus annuus HOM05D005394 ORTHO05D006909 1.2e-276 956.8 935 61.0
Manes.02G088100 Manihot esculenta HOM05D005394 ORTHO05D006909 2.7e-276 955.7 934 61.5
FAN05G5751 Fragaria x ananassa HOM05D005394 ORTHO05D006909 3.5e-276 955.3 916 58.5
arahy.Tifrunner.gnm1.ann1.C2BK4Q Arachis hypogaea HOM05D005394 ORTHO05D006909 5.9e-276 954.5 952 59.2
FAN02G2503 Fragaria x ananassa HOM05D005394 ORTHO05D006909 1.0e-275 953.7 916 58.5
FAN09G4660 Fragaria x ananassa HOM05D005394 ORTHO05D006909 1.3e-275 953.4 916 58.4
TWI14G0801 Tripterygium wilfordii HOM05D005394 ORTHO05D006909 2.9e-275 952.2 923 59.8
Oeu020932.1 Olea europaea HOM05D005394 ORTHO05D006909 3.9e-275 951.8 863 64.9
HanXRQChr17g0559821 Helianthus annuus HOM05D005394 ORTHO05D006909 6.6e-275 951.0 867 62.6
Duzib212G0967 Durio zibethinus HOM05D005394 ORTHO05D006909 9.5e-274 947.2 924 61.6
QL08p044839 Quercus lobata HOM05D005394 ORTHO05D006909 2.1e-273 946.0 965 62.9
PGR042G0197 Punica granatum HOM05D005394 ORTHO05D006909 2.8e-273 945.7 934 62.1
Aa31sc829G10 Aethionema arabicum HOM05D005394 ORTHO05D006909 6.2e-273 944.5 932 58.9
AUR62015139 Chenopodium quinoa HOM05D005394 ORTHO05D006909 1.8e-272 943.0 746 68.0
MSTRG.15035 Avicennia marina HOM05D005394 ORTHO05D006909 3.1e-272 942.2 951 59.2
AUR62017599 Chenopodium quinoa HOM05D005394 ORTHO05D006909 9.8e-271 937.2 746 67.6
C06p42040 Brassica napus HOM05D005394 ORTHO05D006909 1.6e-268 929.9 919 58.8
A07p34470 Brassica napus HOM05D005394 ORTHO05D006909 4.6e-268 928.3 922 58.2
Haze_13523 Corylus avellana HOM05D005394 ORTHO05D006909 4.6e-268 928.3 964 56.7
BolC6t39222H Brassica oleracea HOM05D005394 ORTHO05D006909 3.0e-267 925.6 918 58.6
BcaC08g46216 Brassica carinata HOM05D005394 ORTHO05D006909 6.6e-267 924.5 917 58.3
Sp5g22930 Schrenkiella parvula HOM05D005394 ORTHO05D006909 1.9e-266 922.9 926 58.9
Eucgr.A02013 Eucalyptus grandis HOM05D005394 ORTHO05D006909 2.1e-265 919.5 756 64.2
AL2G26730 Arabidopsis lyrata HOM05D005394 ORTHO05D006909 6.8e-264 914.4 924 58.1
BcaB03g15148 Brassica carinata HOM05D005394 ORTHO05D006909 2.0e-263 912.9 756 63.6
CDE02G3161 Ceratophyllum demersum HOM05D005394 ORTHO05D006909 2.6e-263 912.5 934 57.7
Carub.0002s1442 Capsella rubella HOM05D005394 ORTHO05D006909 1.3e-262 910.2 923 57.7
AT1G67930 Arabidopsis thaliana HOM05D005394 ORTHO05D006909 6.4e-262 907.9 924 58.0
BolC6t38908H Brassica oleracea HOM05D005394 ORTHO05D006909 8.3e-262 907.5 918 58.4
BraA07t31074Z Brassica rapa HOM05D005394 ORTHO05D006909 8.3e-262 907.5 760 63.4
unitig_46.g18287 Utricularia gibba HOM05D005394 ORTHO05D006909 5.4e-261 904.8 932 57.2
BcaB03g15386 Brassica carinata HOM05D005394 ORTHO05D006909 6.0e-260 901.4 853 60.0
BcaC08g46016 Brassica carinata HOM05D005394 ORTHO05D006909 1.7e-259 899.8 918 58.3
C06p38110 Brassica napus HOM05D005394 ORTHO05D006909 1.7e-259 899.8 918 58.3
CARHR060570 Cardamine hirsuta HOM05D005394 ORTHO05D006909 3.0e-259 899.0 925 56.9
Lj1A601G23 Lonicera japonica HOM05D005394 ORTHO05D006909 1.9e-258 896.3 733 67.3
SGA_v2.0_scaffold4G02121 Striga asiatica HOM05D005394 ORTHO05D006909 2.1e-257 892.9 1021 54.8
Rhsim12G0008000 Rhododendron simsii HOM05D005394 ORTHO05D006909 8.9e-256 887.5 936 61.8
Sabra02G0047500 Salix brachista HOM05D005394 ORTHO05D006909 5.8e-255 884.8 923 55.8
Migut.E01770 Erythranthe guttata HOM05D005394 ORTHO05D006909 1.1e-253 880.6 924 57.7
Thhalv10018283m.g Eutrema salsugineum HOM05D005394 ORTHO05D006909 1.1e-253 880.6 722 64.7
ATR0605G001 Amborella trichopoda HOM05D005394 ORTHO05D006909 1.3e-251 873.6 929 58.2
ECA233G4606 Erigeron canadensis HOM05D005394 ORTHO05D006909 3.4e-247 859.0 840 62.1
CAN.G2018.3 Capsicum annuum HOM05D005394 ORTHO05D006909 1.0e-243 847.4 665 68.6
Zm00001eb286850 Zea mays HOM05D005394 ORTHO05D006909 1.4e-240 837.0 926 58.0
HPP92_002195 Vanilla planifolia HOM05D005394 ORTHO05D006909 3.1e-240 835.9 912 51.4
SHI02103 Sapria himalayana HOM05D005394 ORTHO05D006909 5.3e-232 808.5 934 50.9
SEGI_12117 Sequoiadendron giganteum HOM05D005394 ORTHO05D006909 4.5e-231 805.4 929 50.5
Mapoly0082s0010 Marchantia polymorpha HOM05D005394 ORTHO05D006909 8.4e-222 774.6 863 50.3
Actinidia25071 Actinidia chinensis HOM05D005394 ORTHO05D006909 6.3e-209 731.9 950 51.4
Pp3c10_16550 Physcomitrium patens HOM05D005394 ORTHO05D006909 6.3e-209 731.9 863 47.5
Pp3c14_13420 Physcomitrium patens HOM05D005394 ORTHO05D006909 5.3e-208 728.8 862 47.4
SMO266G0070 Selaginella moellendorffii HOM05D005394 ORTHO05D006909 1.2e-199 701.0 867 45.9
CBR_g53704 Chara braunii HOM05D005394 ORTHO05D006909 3.3e-194 682.9 875 44.5
Cpa.g.sc2.203 Carica papaya HOM05D005394 ORTHO05D006909 6.5e-182 642.1 522 67.2
Actinidia12539 Actinidia chinensis HOM05D005394 ORTHO05D006909 3.6e-156 556.6 541 60.6
Oeu033979.1 Olea europaea HOM05D005394 ORTHO05D006909 3.1e-147 526.9 560 55.7
Atru.chr6.2063 Acer truncatum HOM05D005394 ORTHO05D006909 2.8e-124 450.7 321 73.2
CDE09G0652 Ceratophyllum demersum HOM05D005394 ORTHO05D006909 6.9e-123 446.0 313 72.2
MBI10_g36389_MAGBIO Magnolia biondii HOM05D005394 ORTHO05D006909 1.0e-118 432.2 286 77.3
Cre17.g721900 Chlamydomonas reinhardtii HOM05D005394 ORTHO05D006909 1.6e-100 371.7 737 32.8
PRCOL_00001583 Prasinoderma coloniale HOM05D005394 ORTHO05D006909 8.5e-97 359.4 716 32.0
MBI10_g36386_MAGBIO Magnolia biondii HOM05D005394 ORTHO05D006909 1.8e-86 325.1 392 49.0
Cpa.g.sc2.200 Carica papaya HOM05D005394 ORTHO05D006909 1.8e-78 298.5 374 56.1
MCO08G047 Micromonas commoda HOM05D005394 ORTHO05D006909 9.4e-72 276.2 777 29.3
Actinidia12538 Actinidia chinensis HOM05D005394 ORTHO05D006909 1.7e-60 238.8 259 57.1
CSS0027861 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 6.3e-60 236.9 206 63.6
DCAR_032393 Daucus carota HOM05D005394 ORTHO05D011132 2.9e-49 201.4 140 75.7
BcaB01g03482 Brassica carinata HOM05D005394 ORTHO05D006909 3.0e-46 191.4 131 73.3
Haze_13526 Corylus avellana HOM05D005394 ORTHO05D006909 3.0e-46 191.4 196 60.2
HanXRQChr14g0428721 Helianthus annuus HOM05D005394 ORTHO05D006909 2.6e-45 188.3 125 77.6
CSS0006481 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 3.7e-44 184.5 142 73.2
CSS0003150 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 8.0e-39 166.8 154 58.4
CSS0047075 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 1.8e-38 165.6 154 58.4
CSS0027532 Camellia sinensis var. sinensis HOM05D005394 ORTHO05D006909 1.1e-35 156.4 160 57.5
unitig_748.g8066 Utricularia gibba HOM05D005394 ORTHO05D006909 1.5e-32 146.0 121 66.1
BcaB01g03481 Brassica carinata HOM05D005394 ORTHO05D006909 1.5e-16 92.8 71 67.6
Actinidia12535 Actinidia chinensis HOM05D005394 ORTHO05D055987 9.9e-13 80.1 61 70.5
vmacro08922 Vaccinium macrocarpon HOM05D002560 ORTHO05D003782 1.9e-11 75.9 46 71.7


User provided reference genes

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