Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00942 Vaccinium macrocarpon HOM05D001705 ORTHO05D008928 1.8e-63 245.7 120 100.0
Rhsim12G0002800 Rhododendron simsii HOM05D001705 ORTHO05D008928 6.7e-47 190.7 110 86.4
Actinidia29374 Actinidia chinensis HOM05D001705 ORTHO05D008928 1.4e-39 166.4 108 77.8
CSS0011722 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 6.7e-39 164.1 109 78.0
CSS0025148 Camellia sinensis var. sinensis HOM05D006697 ORTHO05D008161 2.0e-38 162.5 114 74.6
Dinv22114 Davidia involucrata HOM05D001705 ORTHO05D008928 5.7e-38 161.0 106 77.4
Dinv37409 Davidia involucrata HOM05D001705 ORTHO05D008928 2.2e-37 159.1 106 75.5
Haze_13961 Corylus avellana HOM05D001705 ORTHO05D008953 5.9e-35 151.0 107 70.1
Prupe.8G006600 Prunus persica HOM05D001705 ORTHO05D008928 7.7e-35 150.6 106 71.7
QL07p047839 Quercus lobata HOM05D001705 ORTHO05D008928 1.3e-34 149.8 105 70.5
QL07p031108 Quercus lobata HOM05D001705 ORTHO05D008928 2.2e-34 149.1 105 70.5
Atru.chr3.1320 Acer truncatum HOM05D001705 ORTHO05D008928 5.0e-34 147.9 106 71.7
Cfa008073 Carpinus fangiana HOM05D001705 ORTHO05D008928 5.0e-34 147.9 103 72.8
CiPaw.03G013900 Carya illinoinensis HOM05D001705 ORTHO05D008928 6.5e-34 147.5 96 72.9
CiPaw.10G112700 Carya illinoinensis HOM05D001705 ORTHO05D008928 8.5e-34 147.1 106 70.8
FAN24G2035 Fragaria x ananassa HOM05D001705 ORTHO05D008928 1.1e-33 146.7 110 68.2
RcHm_v2.0_Chr6g0251131 Rosa chinensis HOM05D001705 ORTHO05D008928 1.1e-33 146.7 95 75.8
Ciclev10022992m.g Citrus clementina HOM05D001705 ORTHO05D008928 3.2e-33 145.2 106 67.9
Hma1.2p1_2213F.1_g317220 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 3.2e-33 145.2 102 69.6
TAR628G0577 Trochodendron aralioides HOM05D001705 ORTHO05D008928 4.2e-33 144.8 96 72.9
GSVIVG01036284001 Vitis vinifera HOM05D001705 ORTHO05D008928 4.2e-33 144.8 101 70.3
Sabra19G0082700 Salix brachista HOM05D001705 ORTHO05D008928 5.5e-33 144.4 106 67.0
FvH4_2g00750 Fragaria vesca HOM05D001705 ORTHO05D008928 2.1e-32 142.5 95 73.7
FAN27G0168 Fragaria x ananassa HOM05D001705 ORTHO05D008928 2.1e-32 142.5 95 73.7
Hma1.2p1_0238F.1_g099670 Hydrangea macrophylla HOM05D001705 ORTHO05D008928 2.7e-32 142.1 96 70.8
Cpa.g.sc21.88 Carica papaya HOM05D001705 ORTHO05D008928 3.6e-32 141.7 100 68.0
Glyma.06G321300 Glycine max HOM05D001705 ORTHO05D008928 6.1e-32 141.0 89 78.7
Peaxi162Scf00078g00076 Petunia axillaris HOM05D001705 ORTHO05D008928 6.1e-32 141.0 106 64.2
HanXRQChr01g0026311 Helianthus annuus HOM05D001705 ORTHO05D008928 1.0e-31 140.2 98 67.3
Medtr3g008540 Medicago truncatula HOM05D001705 ORTHO05D008928 1.0e-31 140.2 86 77.9
Duzib106G1039 Durio zibethinus HOM05D001705 ORTHO05D008928 1.4e-31 139.8 101 67.3
Lj3g0021440 Lotus japonicus HOM05D001705 ORTHO05D008928 1.4e-31 139.8 86 79.1
Nitab4.5_0003432g0050 Nicotiana tabacum HOM05D001705 ORTHO05D008928 1.8e-31 139.4 118 60.2
DCAR_003512 Daucus carota HOM05D001705 ORTHO05D008928 2.3e-31 139.0 107 66.4
arahy.Tifrunner.gnm1.ann1.X4BGNP Arachis hypogaea HOM05D001705 ORTHO05D008928 3.0e-31 138.7 104 66.3
Nitab4.5_0007940g0020 Nicotiana tabacum HOM05D001705 ORTHO05D008928 3.0e-31 138.7 107 63.6
VMungo1080G1609 Vigna mungo HOM05D001705 ORTHO05D008928 3.0e-31 138.7 92 75.0
MD05G1003200 Malus domestica HOM05D001705 ORTHO05D008928 3.9e-31 138.3 106 66.0
Nn6g34378 Nelumbo nucifera HOM05D001705 ORTHO05D008928 3.9e-31 138.3 98 69.4
Phvul.L001622 Phaseolus vulgaris HOM05D001705 ORTHO05D008928 3.9e-31 138.3 87 75.9
Potri.019G070801 Populus trichocarpa HOM05D001705 ORTHO05D008928 3.9e-31 138.3 96 69.8
CANSAT21G1408 Cannabis sativa HOM05D001705 ORTHO05D008928 5.2e-31 137.9 87 75.9
CANSAT21G2117 Cannabis sativa HOM05D001705 ORTHO05D008928 5.2e-31 137.9 87 75.9
MD10G1004200 Malus domestica HOM05D001705 ORTHO05D008928 5.2e-31 137.9 106 67.0
Thecc.08G179500 Theobroma cacao HOM05D001705 ORTHO05D008928 5.2e-31 137.9 98 66.3
TAR376G0455 Trochodendron aralioides HOM05D001705 ORTHO05D008928 6.7e-31 137.5 89 74.2
Ah.13g075530 Amaranthus hybridus HOM05D001705 ORTHO05D008928 8.8e-31 137.1 100 66.0
Manes.03G079500 Manihot esculenta HOM05D001705 ORTHO05D008928 8.8e-31 137.1 104 61.5
Psat5g227400 Pisum sativum HOM05D001705 ORTHO05D008928 1.1e-30 136.7 92 72.8
EL10Ac8g18938 Beta vulgaris HOM05D001705 ORTHO05D008928 1.5e-30 136.3 100 64.0
AUR62025342 Chenopodium quinoa HOM05D001705 ORTHO05D008928 2.0e-30 136.0 101 63.4
Aqoxy1G00582 Aquilegia oxysepala HOM05D001705 ORTHO05D008928 4.4e-30 134.8 100 65.0
CAN.G836.15 Capsicum annuum HOM05D001705 ORTHO05D008928 4.4e-30 134.8 107 63.6
Migut.C01384 Erythranthe guttata HOM05D001705 ORTHO05D008928 7.4e-30 134.0 92 68.5
Gohir.A06G168000 Gossypium hirsutum HOM05D001705 ORTHO05D008928 7.4e-30 134.0 99 65.7
Gohir.D06G175400 Gossypium hirsutum HOM05D001705 ORTHO05D008928 7.4e-30 134.0 99 65.7
Gorai.010G205800 Gossypium raimondii HOM05D001705 ORTHO05D008928 7.4e-30 134.0 99 65.7
Sed0017068 Sechium edule HOM05D001705 ORTHO05D008928 7.4e-30 134.0 102 65.7
Lj3g0024983 Lotus japonicus HOM05D001705 ORTHO05D008928 9.7e-30 133.7 88 72.7
Sopen02g034700 Solanum pennellii HOM05D001705 ORTHO05D008928 1.3e-29 133.3 88 72.7
TWI81G0898 Tripterygium wilfordii HOM05D001705 ORTHO05D008928 1.3e-29 133.3 86 73.3
AUR62028345 Chenopodium quinoa HOM05D001705 ORTHO05D008928 1.7e-29 132.9 103 62.1
PGSC0003DMG400010036 Solanum tuberosum HOM05D001705 ORTHO05D008928 1.7e-29 132.9 103 64.1
SalBow7G0612 Salvia bowleyana HOM05D001705 ORTHO05D008928 2.8e-29 132.1 93 68.8
Lalb_Chr15g0079721 Lupinus albus HOM05D001705 ORTHO05D008928 4.8e-29 131.3 86 69.8
MSTRG.5080 Avicennia marina HOM05D001705 ORTHO05D008928 6.3e-29 131.0 105 63.8
MBI06_g14319_MAGBIO Magnolia biondii HOM05D001705 ORTHO05D008928 8.2e-29 130.6 90 68.9
COL.COLO4_25141 Corchorus olitorius HOM05D001705 ORTHO05D008928 1.1e-28 130.2 99 66.7
Lsat_1_v5_gn_1_56320 Lactuca sativa HOM05D001705 ORTHO05D008928 1.1e-28 130.2 111 61.3
PGR044G0661 Punica granatum HOM05D001705 ORTHO05D008928 1.4e-28 129.8 101 61.4
CDE11G0405 Ceratophyllum demersum HOM05D001705 ORTHO05D008928 2.4e-28 129.0 98 63.3
Eucgr.F02944 Eucalyptus grandis HOM05D001705 ORTHO05D008928 5.3e-28 127.9 106 60.4
ClCG08G000770 Citrullus lanatus HOM05D001705 ORTHO05D008928 7.0e-28 127.5 109 59.6
ECA248G1877 Erigeron canadensis HOM05D001705 ORTHO05D008928 7.0e-28 127.5 93 65.6
THA.LOC104815816 Tarenaya hassleriana HOM05D001705 ORTHO05D008928 1.6e-27 126.3 98 59.2
Sc18g0002990 Simmondsia chinensis HOM05D001705 ORTHO05D008928 1.3e-26 123.2 87 69.0
unitig_8.g4896 Utricularia gibba HOM05D001705 ORTHO05D008928 2.9e-26 122.1 89 62.9
BcaB05g23921 Brassica carinata HOM05D001705 ORTHO05D008928 6.5e-26 120.9 109 56.0
Aa31LG9G11900 Aethionema arabicum HOM05D001705 ORTHO05D008928 1.5e-25 119.8 99 59.6
MELO3C022174.2 Cucumis melo HOM05D001705 ORTHO05D008928 1.5e-25 119.8 102 57.8
CsaV3_5G039950 Cucumis sativus L. HOM05D001705 ORTHO05D008928 1.5e-25 119.8 102 58.8
BcaB01g01450 Brassica carinata HOM05D001705 ORTHO05D008928 1.9e-25 119.4 116 54.3
Thhalv10029346m.g Eutrema salsugineum HOM05D001705 ORTHO05D008928 2.5e-25 119.0 102 54.9
PSO339G0564 Papaver somniferum HOM05D001705 ORTHO05D008928 4.2e-25 118.2 93 64.5
A09p28840 Brassica napus HOM05D001705 ORTHO05D008928 5.5e-25 117.9 113 53.1
BraA09t38446Z Brassica rapa HOM05D001705 ORTHO05D008928 5.5e-25 117.9 113 53.1
BcaB04g18852 Brassica carinata HOM05D001705 ORTHO05D008928 9.4e-25 117.1 98 58.2
AT4G10100 Arabidopsis thaliana HOM05D001705 ORTHO05D008928 1.6e-24 116.3 98 56.1
C09p36640 Brassica napus HOM05D001705 ORTHO05D008928 1.6e-24 116.3 113 53.1
BolC9t56496H Brassica oleracea HOM05D001705 ORTHO05D008928 1.6e-24 116.3 113 53.1
AL6G43910 Arabidopsis lyrata HOM05D001705 ORTHO05D008928 2.1e-24 115.9 101 57.4
CARHR261140 Cardamine hirsuta HOM05D001705 ORTHO05D008928 2.1e-24 115.9 98 55.1
Sp6g07460 Schrenkiella parvula HOM05D001705 ORTHO05D008928 2.7e-24 115.5 104 52.9
BcaC04g21016 Brassica carinata HOM05D001705 ORTHO05D008928 4.7e-24 114.8 87 60.9
Carub.0006s2867 Capsella rubella HOM05D001705 ORTHO05D008928 6.1e-24 114.4 98 56.1
VMungo0464G0569 Vigna mungo HOM05D001705 ORTHO05D008928 6.1e-24 114.4 78 71.8
ATR0757G218 Amborella trichopoda HOM05D001705 ORTHO05D008928 8.0e-24 114.0 103 56.3
SEGI_06051 Sequoiadendron giganteum HOM05D001705 ORTHO05D008928 8.0e-24 114.0 107 51.4
SMO178G0001 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 5.7e-22 107.8 92 50.0
Zm00001eb182270 Zea mays HOM05D001705 ORTHO05D008928 1.7e-21 106.3 80 62.5
SMO119G0349 Selaginella moellendorffii HOM05D001705 ORTHO05D008928 2.8e-21 105.5 92 47.8
Os02g0558300 Oryza sativa ssp. japonica HOM05D001705 ORTHO05D008928 6.3e-21 104.4 77 67.5
Zm00001eb244080 Zea mays HOM05D001705 ORTHO05D008928 1.1e-20 103.6 80 61.2
HPP92_013556 Vanilla planifolia HOM05D001705 ORTHO05D008928 1.4e-20 103.2 103 50.5
Solyc02g090010.3 Solanum lycopersicum HOM05D001705 ORTHO05D008928 1.6e-19 99.8 63 76.2
ATR1089G014 Amborella trichopoda HOM05D001705 ORTHO05D008928 2.0e-19 99.4 103 51.5
Pp3c24_14090 Physcomitrium patens HOM05D001705 ORTHO05D008928 5.5e-17 91.3 81 46.9
SHI16716 Sapria himalayana HOM05D001705 ORTHO05D008928 1.2e-16 90.1 93 45.2
Mapoly0053s0105 Marchantia polymorpha HOM05D001705 ORTHO05D008928 8.0e-16 87.4 104 48.1
Cre08.g382545 Chlamydomonas reinhardtii HOM05D001705 ORTHO05D008928 4.1e-12 75.1 84 42.9
BolC2t10291H Brassica oleracea HOM05D001705 ORTHO05D008928 7.0e-12 74.3 68 51.5
CBR_g41370 Chara braunii HOM05D001705 ORTHO05D008928 3.8e-10 68.6 82 36.6
MCO06G125 Micromonas commoda HOM05D001705 ORTHO05D008928 6.6e-10 67.8 84 44.0
CBR_g5690 Chara braunii HOM05D001705 ORTHO05D008928 9.5e-09 63.9 80 37.5
PRCOL_00000441 Prasinoderma coloniale HOM05D000415 ORTHO05D002017 7.5e-06 54.3 92 37.0


User provided reference genes

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