Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00858 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 6.5e-67 257.3 134 100.0
CSS0008085 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 1.1e-37 160.2 91 94.5
CSS0027136 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 1.1e-37 160.2 91 94.5
Rhsim11G0071000 Rhododendron simsii HOM05D006317 ORTHO05D007852 1.4e-37 159.8 91 94.5
CSS0006686 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 9.2e-37 157.1 91 93.4
Actinidia29484 Actinidia chinensis HOM05D006317 ORTHO05D007852 3.5e-36 155.2 91 90.1
Hma1.2p1_0420F.1_g149670 Hydrangea macrophylla HOM05D006317 ORTHO05D007852 7.8e-36 154.1 91 87.9
Dinv27277 Davidia involucrata HOM05D006317 ORTHO05D007852 1.0e-35 153.7 91 90.1
vmacro16444 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 1.7e-35 152.9 91 91.2
MSTRG.25364 Avicennia marina HOM05D006317 ORTHO05D007852 5.6e-34 147.9 91 83.5
FAN27G3154 Fragaria x ananassa HOM05D006317 ORTHO05D007852 7.3e-34 147.5 92 81.5
Oeu051968.1 Olea europaea HOM05D006317 ORTHO05D007852 1.2e-33 146.7 91 84.6
Migut.N03266 Erythranthe guttata HOM05D006317 ORTHO05D007852 2.1e-33 146.0 121 69.4
Dinv14667 Davidia involucrata HOM05D006317 ORTHO05D007852 2.8e-33 145.6 91 85.7
FvH4_2g27730 Fragaria vesca HOM05D006317 ORTHO05D007852 2.8e-33 145.6 91 83.5
FAN20G1754 Fragaria x ananassa HOM05D006317 ORTHO05D007852 2.8e-33 145.6 91 83.5
FAN24G3505 Fragaria x ananassa HOM05D006317 ORTHO05D007852 2.8e-33 145.6 91 83.5
unitig_22.g5398 Utricularia gibba HOM05D006317 ORTHO05D007852 2.8e-33 145.6 97 79.4
MELO3C010655.2 Cucumis melo HOM05D006317 ORTHO05D007852 3.6e-33 145.2 91 83.5
CsaV3_6G034090 Cucumis sativus L. HOM05D006317 ORTHO05D007852 3.6e-33 145.2 91 83.5
Oeu021883.1 Olea europaea HOM05D006317 ORTHO05D007852 3.6e-33 145.2 91 83.5
RcHm_v2.0_Chr6g0296581 Rosa chinensis HOM05D006317 ORTHO05D007852 3.6e-33 145.2 91 83.5
CiPaw.15G032500 Carya illinoinensis HOM05D006317 ORTHO05D007852 4.7e-33 144.8 91 84.6
Lalb_Chr08g0241161 Lupinus albus HOM05D006317 ORTHO05D007852 4.7e-33 144.8 91 83.5
QL09p032738 Quercus lobata HOM05D006317 ORTHO05D007852 4.7e-33 144.8 97 79.4
Sed0014816 Sechium edule HOM05D006317 ORTHO05D007852 4.7e-33 144.8 91 83.5
SalBow2G0856 Salvia bowleyana HOM05D006317 ORTHO05D007852 8.0e-33 144.1 91 82.4
Cfa018120 Carpinus fangiana HOM05D006317 ORTHO05D007852 1.0e-32 143.7 99 76.8
Cc10_g12550 Coffea canephora HOM05D006317 ORTHO05D007852 1.0e-32 143.7 91 81.3
Gohir.A05G237800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 1.0e-32 143.7 91 83.5
Lalb_Chr23g0271161 Lupinus albus HOM05D006317 ORTHO05D007852 1.0e-32 143.7 91 81.3
Medtr3g088525 Medicago truncatula HOM05D006317 ORTHO05D007852 1.0e-32 143.7 91 82.4
Phvul.009G129100 Phaseolus vulgaris HOM05D006317 ORTHO05D007852 1.0e-32 143.7 91 83.5
TWI32G0551 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 1.0e-32 143.7 91 84.6
Gohir.D05G239800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 1.4e-32 143.3 97 79.4
Gorai.009G248700 Gossypium raimondii HOM05D006317 ORTHO05D007852 1.4e-32 143.3 97 79.4
arahy.Tifrunner.gnm1.ann1.0GY0RD Arachis hypogaea HOM05D006317 ORTHO05D007852 1.8e-32 142.9 91 80.2
arahy.Tifrunner.gnm1.ann1.ID1H8K Arachis hypogaea HOM05D006317 ORTHO05D007852 1.8e-32 142.9 91 80.2
Glyma.04G246100 Glycine max HOM05D006317 ORTHO05D007852 1.8e-32 142.9 91 82.4
TAR375G0871 Trochodendron aralioides HOM05D006317 ORTHO05D007852 1.8e-32 142.9 91 83.5
Nn1g09356 Nelumbo nucifera HOM05D006317 ORTHO05D007852 2.3e-32 142.5 97 78.4
Peaxi162Scf01003g00121 Petunia axillaris HOM05D006317 ORTHO05D007852 3.1e-32 142.1 97 78.4
VMungo1309G0699 Vigna mungo HOM05D006317 ORTHO05D007852 3.1e-32 142.1 91 83.5
GSVIVG01036785001 Vitis vinifera HOM05D006317 ORTHO05D007852 3.1e-32 142.1 91 81.3
COL.COLO4_05688 Corchorus olitorius HOM05D006317 ORTHO05D007852 4.0e-32 141.7 92 80.4
SGA_v2.0_scaffold25G11134 Striga asiatica HOM05D006317 ORTHO05D007852 4.0e-32 141.7 91 80.2
Duzib116G0606 Durio zibethinus HOM05D006317 ORTHO05D007852 5.2e-32 141.4 91 83.5
Eucgr.D00248 Eucalyptus grandis HOM05D006317 ORTHO05D007852 5.2e-32 141.4 91 80.2
Psat5g085080 Pisum sativum HOM05D006317 ORTHO05D007852 6.8e-32 141.0 91 81.3
ECA246G3352 Erigeron canadensis HOM05D006317 ORTHO05D007852 8.9e-32 140.6 91 81.3
Glyma.06G116700 Glycine max HOM05D006317 ORTHO05D007852 8.9e-32 140.6 91 81.3
Nitab4.5_0001168g0010 Nicotiana tabacum HOM05D006317 ORTHO05D007852 8.9e-32 140.6 91 79.1
Sed0004620 Sechium edule HOM05D006317 ORTHO05D007852 8.9e-32 140.6 91 81.3
Lsat_1_v5_gn_6_109060 Lactuca sativa HOM05D006317 ORTHO05D007852 1.2e-31 140.2 91 80.2
Lj1g0010212 Lotus japonicus HOM05D006317 ORTHO05D007852 1.2e-31 140.2 91 81.3
Nitab4.5_0002045g0100 Nicotiana tabacum HOM05D006317 ORTHO05D007852 1.5e-31 139.8 91 79.1
Manes.02G167400 Manihot esculenta HOM05D006317 ORTHO05D007852 2.0e-31 139.4 97 77.3
THA.LOC104813677 Tarenaya hassleriana HOM05D006317 ORTHO05D007852 2.0e-31 139.4 91 81.3
TWI34G0863 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 2.0e-31 139.4 91 81.3
Thecc.08G132100 Theobroma cacao HOM05D006317 ORTHO05D007852 2.6e-31 139.0 91 80.2
Atru.chr13.1550 Acer truncatum HOM05D006317 ORTHO05D007852 3.4e-31 138.7 91 81.3
unitig_8.g3836 Utricularia gibba HOM05D006317 ORTHO05D007852 3.4e-31 138.7 91 78.0
Duzib041G0795 Durio zibethinus HOM05D006317 ORTHO05D007852 4.4e-31 138.3 91 80.2
Solyc11g005000.2 Solanum lycopersicum HOM05D006317 ORTHO05D007852 4.4e-31 138.3 91 80.2
Manes.18G081900 Manihot esculenta HOM05D006317 ORTHO05D007852 5.8e-31 137.9 97 76.3
Cpa.g.sc64.145 Carica papaya HOM05D006317 ORTHO05D007852 7.5e-31 137.5 91 79.1
Ciclev10002865m.g Citrus clementina HOM05D006317 ORTHO05D007852 7.5e-31 137.5 91 79.1
CANSAT35G0412 Cannabis sativa HOM05D006317 ORTHO05D007852 9.8e-31 137.1 97 77.3
MBI03_g35425_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 9.8e-31 137.1 97 73.2
Sopen11g001020 Solanum pennellii HOM05D006317 ORTHO05D007852 9.8e-31 137.1 91 79.1
PGSC0003DMG400006049 Solanum tuberosum HOM05D006317 ORTHO05D007852 9.8e-31 137.1 91 79.1
Potri.019G066600 Populus trichocarpa HOM05D006317 ORTHO05D007852 1.3e-30 136.7 90 80.0
CARHR070830 Cardamine hirsuta HOM05D006317 ORTHO05D007852 1.7e-30 136.3 114 70.2
PGR044G1554 Punica granatum HOM05D006317 ORTHO05D007852 1.7e-30 136.3 91 81.3
Prupe.1G490600 Prunus persica HOM05D006317 ORTHO05D007852 2.2e-30 136.0 91 79.1
Sc10g0008060 Simmondsia chinensis HOM05D006317 ORTHO05D007852 2.2e-30 136.0 91 75.8
CAN.G342.14 Capsicum annuum HOM05D006317 ORTHO05D007852 2.9e-30 135.6 91 78.0
CDE06G2198 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 2.9e-30 135.6 91 76.9
ATR1101G062 Amborella trichopoda HOM05D006317 ORTHO05D007852 8.3e-30 134.0 91 75.8
Carub.0002s2423 Capsella rubella HOM05D006317 ORTHO05D007852 8.3e-30 134.0 91 79.1
Aa31LG4G7370 Aethionema arabicum HOM05D006317 ORTHO05D007852 1.4e-29 133.3 91 79.1
Thhalv10019323m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 1.9e-29 132.9 91 78.0
HanXRQChr05g0148711 Helianthus annuus HOM05D006317 ORTHO05D007852 1.9e-29 132.9 84 82.1
A06p17730 Brassica napus HOM05D006317 ORTHO05D007852 2.4e-29 132.5 91 75.8
CDE07G1891 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 2.4e-29 132.5 91 79.1
BcaB07g32159 Brassica carinata HOM05D006317 ORTHO05D007852 9.2e-29 130.6 91 75.8
A08p28870 Brassica napus HOM05D006317 ORTHO05D007852 1.6e-28 129.8 91 76.9
BraA06t24865Z Brassica rapa HOM05D006317 ORTHO05D007852 1.6e-28 129.8 91 74.7
AT1G77350 Arabidopsis thaliana HOM05D006317 ORTHO05D007852 3.5e-28 128.6 92 78.3
Sp1g19190 Schrenkiella parvula HOM05D006317 ORTHO05D007852 6.0e-28 127.9 91 74.7
C08p20980 Brassica napus HOM05D006317 ORTHO05D007852 1.0e-27 127.1 91 74.7
BolC8t49735H Brassica oleracea HOM05D006317 ORTHO05D007852 1.0e-27 127.1 91 74.7
BraA08t34818Z Brassica rapa HOM05D006317 ORTHO05D007852 1.0e-27 127.1 91 74.7
Ah.01g020580 Amaranthus hybridus HOM05D006317 ORTHO05D007852 1.3e-27 126.7 97 68.0
BcaC06g34898 Brassica carinata HOM05D006317 ORTHO05D007852 3.0e-27 125.6 90 74.4
A07p14980 Brassica napus HOM05D006317 ORTHO05D007852 3.0e-27 125.6 90 74.4
BolC7t42733H Brassica oleracea HOM05D006317 ORTHO05D007852 3.0e-27 125.6 90 74.4
BraA07t29244Z Brassica rapa HOM05D006317 ORTHO05D007852 3.0e-27 125.6 90 74.4
EL10Ac9g21899 Beta vulgaris HOM05D006317 ORTHO05D007852 3.9e-27 125.2 91 71.4
BcaB03g14259 Brassica carinata HOM05D006317 ORTHO05D007852 5.0e-27 124.8 91 72.5
Aqoxy1G01739 Aquilegia oxysepala HOM05D006317 ORTHO05D007852 6.6e-27 124.4 91 72.5
C07p22030 Brassica napus HOM05D006317 ORTHO05D007852 8.6e-27 124.0 89 74.2
Thhalv10009123m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 8.6e-27 124.0 92 75.0
HPP92_021212 Vanilla planifolia HOM05D006317 ORTHO05D007852 5.6e-26 121.3 99 68.7
Mapoly0014s0111 Marchantia polymorpha HOM05D006317 ORTHO05D007852 7.3e-26 120.9 91 67.0
Zm00001eb128810 Zea mays HOM05D006317 ORTHO05D007852 9.5e-26 120.6 91 71.4
AUR62016336 Chenopodium quinoa HOM05D006317 ORTHO05D007852 4.7e-25 118.2 91 68.1
ClCG08G005990 Citrullus lanatus HOM05D006317 ORTHO05D007852 4.7e-25 118.2 141 52.5
AagrBONN_evm.TU.Sc2ySwM_344.4689 Anthoceros agrestis HOM05D006317 ORTHO05D007852 1.1e-24 117.1 97 61.9
Sabra19G0078300 Salix brachista HOM05D006317 ORTHO05D007852 1.1e-24 117.1 104 66.3
SHI09189 Sapria himalayana HOM05D006317 ORTHO05D007852 1.1e-24 117.1 102 64.7
AL2G37550 Arabidopsis lyrata HOM05D006317 ORTHO05D007852 1.4e-24 116.7 117 62.4
Os05g0486200 Oryza sativa ssp. japonica HOM05D006317 ORTHO05D007852 1.4e-24 116.7 100 68.0
DCAR_018876 Daucus carota HOM05D006317 ORTHO05D007852 1.5e-23 113.2 69 85.5
Nn7g37402 Nelumbo nucifera HOM05D006317 ORTHO05D007852 4.4e-23 111.7 69 79.7
MBI06_g36652_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 5.8e-23 111.3 97 64.9
CBR_g12067 Chara braunii HOM05D006317 ORTHO05D007852 9.8e-23 110.5 95 61.1
SMO298G0052 Selaginella moellendorffii HOM05D006317 ORTHO05D007852 1.4e-21 106.7 93 62.4
BcaB03g14260 Brassica carinata HOM05D006317 ORTHO05D007852 2.0e-15 86.3 95 57.9
CSS0043705 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 2.0e-15 86.3 46 93.5
Gohir.A02G071601 Gossypium hirsutum HOM05D006317 ORTHO05D007852 1.4e-13 80.1 58 75.9
SGA_v2.0_scaffold28G11977 Striga asiatica HOM05D006317 ORTHO05D007852 1.9e-13 79.7 52 84.6
BolC5t30761H Brassica oleracea HOM05D006317 ORTHO05D007852 5.6e-10 68.2 52 71.2
FAN15G1039 Fragaria x ananassa HOM05D006317 ORTHO05D007852 1.2e-07 60.5 37 75.7
Haze_17997 Corylus avellana HOM05D001650 ORTHO05D001592 9.9e-07 57.4 41 68.3


User provided reference genes

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