Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00835 Vaccinium macrocarpon HOM05D006622 ORTHO05D007939 4.6e-166 587.8 293 100.0
RhsimUnG0092500 Rhododendron simsii HOM05D006622 ORTHO05D007939 1.2e-145 520.0 277 92.1
Actinidia29467 Actinidia chinensis HOM05D006622 ORTHO05D007939 5.7e-140 501.1 277 87.7
CSS0023480 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 3.8e-136 488.4 279 85.3
CSS0048522 Camellia sinensis var. sinensis HOM05D006622 ORTHO05D007939 3.8e-136 488.4 279 85.3
Dinv27309 Davidia involucrata HOM05D006622 ORTHO05D007939 5.1e-133 478.0 279 84.2
TAR628G0332 Trochodendron aralioides HOM05D006622 ORTHO05D007939 4.8e-123 444.9 273 81.7
Oeu040412.1 Olea europaea HOM05D006622 ORTHO05D007939 1.0e-120 437.2 283 77.0
Cfa016021 Carpinus fangiana HOM05D006622 ORTHO05D007939 1.9e-119 433.0 277 77.6
CiPaw.06G031300 Carya illinoinensis HOM05D006622 ORTHO05D007939 2.7e-118 429.1 276 76.1
QL09p034510 Quercus lobata HOM05D006622 ORTHO05D007939 8.0e-118 427.6 277 74.4
DCAR_003552 Daucus carota HOM05D006622 ORTHO05D007939 3.9e-117 425.2 276 74.6
FAN15G0029 Fragaria x ananassa HOM05D006622 ORTHO05D007939 5.2e-117 424.9 278 76.6
FvH4_2g26990 Fragaria vesca HOM05D006622 ORTHO05D007939 1.1e-116 423.7 278 77.0
FAN24G2914 Fragaria x ananassa HOM05D006622 ORTHO05D007939 1.1e-116 423.7 278 77.0
MSTRG.24172 Avicennia marina HOM05D006622 ORTHO05D007939 3.3e-116 422.2 269 80.7
Atru.chr13.1464 Acer truncatum HOM05D006622 ORTHO05D007939 4.4e-116 421.8 267 77.2
Sabra05G0134700 Salix brachista HOM05D006622 ORTHO05D007939 5.7e-116 421.4 280 75.4
RcHm_v2.0_Chr6g0295871 Rosa chinensis HOM05D006622 ORTHO05D007939 9.7e-116 420.6 277 76.9
Eucgr.F04350 Eucalyptus grandis HOM05D006622 ORTHO05D007939 2.2e-115 419.5 276 72.8
Prupe.1G495500 Prunus persica HOM05D006622 ORTHO05D007939 2.8e-115 419.1 278 74.1
Ciclev10001495m.g Citrus clementina HOM05D006622 ORTHO05D007939 3.7e-115 418.7 277 74.4
PGR044G1562 Punica granatum HOM05D006622 ORTHO05D007939 1.4e-114 416.8 276 75.7
Potri.005G178200 Populus trichocarpa HOM05D006622 ORTHO05D007939 2.4e-114 416.0 278 74.1
Thecc.08G125800 Theobroma cacao HOM05D006622 ORTHO05D007939 3.1e-114 415.6 267 76.0
Potri.002G083300 Populus trichocarpa HOM05D006622 ORTHO05D007939 1.2e-113 413.7 273 75.1
CARHR022170 Cardamine hirsuta HOM05D006622 ORTHO05D007939 2.6e-113 412.5 265 75.1
MD15G1347700 Malus domestica HOM05D006622 ORTHO05D007939 3.5e-113 412.1 270 75.2
Manes.18G077500 Manihot esculenta HOM05D006622 ORTHO05D007939 1.3e-112 410.2 280 73.9
TWI60G0608 Tripterygium wilfordii HOM05D006622 ORTHO05D007939 2.2e-112 409.5 276 75.7
AT1G21790 Arabidopsis thaliana HOM05D006622 ORTHO05D007939 1.5e-111 406.8 278 71.6
Duzib093G0047 Durio zibethinus HOM05D006622 ORTHO05D007939 1.9e-111 406.4 258 76.7
AL1G34990 Arabidopsis lyrata HOM05D006622 ORTHO05D007939 2.5e-111 406.0 265 74.0
THA.LOC104800197 Tarenaya hassleriana HOM05D006622 ORTHO05D007939 3.2e-111 405.6 277 70.8
GSVIVG01008863001 Vitis vinifera HOM05D006622 ORTHO05D007939 5.5e-111 404.8 254 76.8
Atru.chr13.1486 Acer truncatum HOM05D006622 ORTHO05D007939 7.2e-111 404.4 253 78.3
Thhalv10008385m.g Eutrema salsugineum HOM05D006622 ORTHO05D007939 1.2e-110 403.7 264 73.5
BcaB07g32178 Brassica carinata HOM05D006622 ORTHO05D007939 1.6e-110 403.3 278 70.9
Haze_00437 Corylus avellana HOM05D006622 ORTHO05D007939 1.4e-109 400.2 346 61.8
Aa31LG7G5770 Aethionema arabicum HOM05D006622 ORTHO05D007939 1.8e-109 399.8 269 72.1
Carub.0001s2125 Capsella rubella HOM05D006622 ORTHO05D007939 1.8e-109 399.8 265 72.8
C05p20800 Brassica napus HOM05D006622 ORTHO05D007939 2.3e-109 399.4 276 71.0
BolC5t30779H Brassica oleracea HOM05D006622 ORTHO05D007939 2.3e-109 399.4 276 71.0
Aqoxy5G02345 Aquilegia oxysepala HOM05D006622 ORTHO05D007939 3.0e-109 399.1 269 72.5
COL.COLO4_20860 Corchorus olitorius HOM05D006622 ORTHO05D007939 4.0e-109 398.7 286 70.3
Cc10_g11940 Coffea canephora HOM05D006622 ORTHO05D007939 5.2e-109 398.3 272 73.5
BcaC05g26102 Brassica carinata HOM05D006622 ORTHO05D007939 8.8e-109 397.5 276 70.7
HanXRQChr09g0260611 Helianthus annuus HOM05D006622 ORTHO05D007939 8.8e-109 397.5 270 75.2
A06p17900 Brassica napus HOM05D006622 ORTHO05D007939 1.5e-108 396.7 268 72.0
BraA06t24880Z Brassica rapa HOM05D006622 ORTHO05D007939 1.5e-108 396.7 268 72.0
Lsat_1_v5_gn_4_135580 Lactuca sativa HOM05D006622 ORTHO05D007939 2.8e-107 392.5 254 79.1
Migut.N03281 Erythranthe guttata HOM05D006622 ORTHO05D007939 3.7e-107 392.1 268 74.3
Gohir.D05G270800 Gossypium hirsutum HOM05D006622 ORTHO05D007939 1.1e-106 390.6 266 70.7
Hund26807 Selenicereus undatus HOM05D006622 ORTHO05D007939 1.4e-106 390.2 279 71.3
Lj1g0017707 Lotus japonicus HOM05D006622 ORTHO05D007939 2.4e-106 389.4 269 72.1
SGA_v2.0_scaffold24G10458 Striga asiatica HOM05D006622 ORTHO05D007939 2.4e-106 389.4 269 75.1
Gohir.A05G268900 Gossypium hirsutum HOM05D006622 ORTHO05D007939 5.3e-106 388.3 266 70.3
Gorai.009G283400 Gossypium raimondii HOM05D006622 ORTHO05D007939 4.5e-105 385.2 266 70.3
CAN.G69.14 Capsicum annuum HOM05D006622 ORTHO05D007939 1.3e-104 383.6 278 71.2
MELO3C010612.2 Cucumis melo HOM05D006622 ORTHO05D007939 3.8e-104 382.1 271 69.7
ATR0584G160 Amborella trichopoda HOM05D006622 ORTHO05D007939 1.9e-103 379.8 271 70.8
TPR.G21062 Trifolium pratense HOM05D006622 ORTHO05D007939 1.9e-103 379.8 270 69.3
EL10Ac1g01019 Beta vulgaris HOM05D006622 ORTHO05D007939 2.5e-103 379.4 268 68.7
CsaV3_6G034460 Cucumis sativus L. HOM05D006622 ORTHO05D007939 7.2e-103 377.9 271 69.4
PSO017G0487 Papaver somniferum HOM05D006622 ORTHO05D007939 9.4e-103 377.5 262 72.5
PGSC0003DMG400044436 Solanum tuberosum HOM05D006622 ORTHO05D007939 1.4e-101 373.6 277 71.1
PGSC0003DMG402008996 Solanum tuberosum HOM05D006622 ORTHO05D007939 1.4e-101 373.6 277 71.1
PSO478G0228 Papaver somniferum HOM05D006622 ORTHO05D007939 3.0e-101 372.5 264 71.2
Medtr3g088060 Medicago truncatula HOM05D006622 ORTHO05D007939 8.8e-101 370.9 272 66.5
ECA232G1829 Erigeron canadensis HOM05D006622 ORTHO05D007939 1.5e-100 370.2 267 71.5
Ca_16559_v3 Cicer arietinum L. HOM05D006622 ORTHO05D007939 4.4e-100 368.6 274 68.2
Sopen01g031530 Solanum pennellii HOM05D006622 ORTHO05D007939 2.2e-99 366.3 277 70.0
Solyc01g079770.2 Solanum lycopersicum HOM05D006622 ORTHO05D007939 3.7e-99 365.5 277 69.7
Lalb_Chr11g0065931 Lupinus albus HOM05D006622 ORTHO05D007939 6.3e-99 364.8 274 66.4
Zm00001eb366620 Zea mays HOM05D006622 ORTHO05D007939 1.1e-98 364.0 260 70.8
Zm00001eb146520 Zea mays HOM05D006622 ORTHO05D007939 4.1e-98 362.1 260 70.4
arahy.Tifrunner.gnm1.ann1.29UIE3 Arachis hypogaea HOM05D006622 ORTHO05D007939 1.6e-97 360.1 283 64.0
HPP92_013761 Vanilla planifolia HOM05D006622 ORTHO05D007939 2.7e-97 359.4 269 64.3
arahy.Tifrunner.gnm1.ann1.9BP3HC Arachis hypogaea HOM05D006622 ORTHO05D007939 1.7e-96 356.7 275 64.7
CANSAT35G1811 Cannabis sativa HOM05D006622 ORTHO05D007939 3.8e-96 355.5 290 66.6
Glyma.06G113400 Glycine max HOM05D006622 ORTHO05D007939 1.1e-95 354.0 272 67.6
CANSAT35G0359 Cannabis sativa HOM05D006622 ORTHO05D007939 1.9e-95 353.2 290 66.9
Os01g0869600 Oryza sativa ssp. japonica HOM05D006622 ORTHO05D007939 1.9e-95 353.2 258 70.5
Nitab4.5_0000630g0130 Nicotiana tabacum HOM05D006622 ORTHO05D007939 1.2e-94 350.5 273 68.1
Phvul.009G125300 Phaseolus vulgaris HOM05D006622 ORTHO05D007939 1.6e-94 350.1 271 66.8
VMungo1309G2133 Vigna mungo HOM05D006622 ORTHO05D007939 1.6e-94 350.1 272 66.5
Glyma.04G249500 Glycine max HOM05D006622 ORTHO05D007939 2.1e-94 349.7 273 65.2
Sc15g0002770 Simmondsia chinensis HOM05D006622 ORTHO05D007939 1.7e-88 330.1 273 61.9
AUR62014332 Chenopodium quinoa HOM05D006622 ORTHO05D007939 2.7e-81 306.2 267 60.3
AUR62019075 Chenopodium quinoa HOM05D006622 ORTHO05D007939 4.4e-76 288.9 192 73.4
Sed0026599 Sechium edule HOM05D006622 ORTHO05D007939 7.5e-76 288.1 183 76.0
Oeu040413.1 Olea europaea HOM05D006622 ORTHO05D007939 1.3e-75 287.3 187 77.0
FAN20G1317 Fragaria x ananassa HOM05D006622 ORTHO05D007939 1.4e-74 283.9 180 77.8
Cpa.g.sc64.93 Carica papaya HOM05D006622 ORTHO05D007939 6.6e-72 275.0 176 75.0
MD08G1162300 Malus domestica HOM05D006622 ORTHO05D007939 2.1e-70 270.0 179 70.9
Peaxi162Scf01270g00111 Petunia axillaris HOM05D006622 ORTHO05D007939 2.9e-67 259.6 267 54.3
ClCG08G005670 Citrullus lanatus HOM05D006622 ORTHO05D007939 1.0e-64 251.1 168 70.8
CDE08G0135 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 3.8e-59 232.6 274 50.0
Mapoly0055s0084 Marchantia polymorpha HOM05D006622 ORTHO05D007939 2.7e-57 226.5 288 44.8
CDE06G0548 Ceratophyllum demersum HOM05D006622 ORTHO05D007939 4.6e-57 225.7 153 71.9
SMO351G0129 Selaginella moellendorffii HOM05D006622 ORTHO05D007939 6.0e-57 225.3 283 45.2
Sp1g19350 Schrenkiella parvula HOM05D006622 ORTHO05D007939 1.0e-56 224.6 135 77.8
Psat5g087320 Pisum sativum HOM05D006622 ORTHO05D007939 6.6e-56 221.9 173 63.6
Nn5g28301 Nelumbo nucifera HOM05D006622 ORTHO05D007939 2.1e-49 200.3 273 44.7
Pp3c12_11900 Physcomitrium patens HOM05D006622 ORTHO05D007939 1.3e-48 197.6 269 44.6
Actinidia03468 Actinidia chinensis HOM05D006622 ORTHO05D007939 3.6e-46 189.5 279 42.3
Nitab4.5_0000968g0040 Nicotiana tabacum HOM05D006622 ORTHO05D007939 1.1e-45 188.0 273 44.0
AagrBONN_evm.TU.Sc2ySwM_117.1000 Anthoceros agrestis HOM05D006622 ORTHO05D007939 3.8e-43 179.5 216 46.3
PGSC0003DMG400007898 Solanum tuberosum HOM05D006622 ORTHO05D007939 9.0e-37 158.3 134 62.7
Lj7C341T14 Lonicera japonica HOM05D006622 ORTHO05D007939 1.1e-29 134.8 78 79.5
Aa31LG4G7650 Aethionema arabicum HOM05D006622 ORTHO05D007939 3.1e-29 133.3 78 79.5
Lj7C341T13 Lonicera japonica HOM05D006622 ORTHO05D007939 9.0e-29 131.7 91 68.1
CBR_g40088 Chara braunii HOM05D006622 ORTHO05D007939 6.1e-25 119.0 161 43.5
Prupe.1G512700 Prunus persica HOM05D006622 ORTHO05D007939 1.2e-20 104.8 77 63.6
AagrBONN_evm.TU.Sc2ySwM_117.972 Anthoceros agrestis HOM05D006622 ORTHO05D007939 1.6e-17 94.4 173 39.3
Aa31LG4G7660 Aethionema arabicum HOM05D006622 ORTHO05D007939 1.1e-15 88.2 65 64.6
HPP92_013753 Vanilla planifolia HOM05D006622 ORTHO05D007939 5.7e-15 85.9 62 64.5
unitig_748.g7104 Utricularia gibba HOM05D006622 ORTHO05D007939 3.7e-14 83.2 82 50.0
AagrBONN_evm.TU.Sc2ySwM_117.993 Anthoceros agrestis HOM05D006622 ORTHO05D007939 3.1e-13 80.1 130 40.8


User provided reference genes

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