Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00812 Vaccinium macrocarpon HOM05D006768 ORTHO05D008436 2.5e-62 241.9 118 100.0
Manes.02G160800 Manihot esculenta HOM05D006768 ORTHO05D008436 3.0e-39 165.2 103 83.5
Manes.18G074850 Manihot esculenta HOM05D006768 ORTHO05D008436 3.0e-39 165.2 103 83.5
CsaV3_6G003570 Cucumis sativus L. HOM05D006768 ORTHO05D008436 1.1e-38 163.3 105 78.1
MELO3C011580.2 Cucumis melo HOM05D006768 ORTHO05D008436 2.5e-38 162.2 103 79.6
ClCG08G005390 Citrullus lanatus HOM05D006768 ORTHO05D008436 3.3e-38 161.8 103 78.6
Sed0001868 Sechium edule HOM05D006768 ORTHO05D008436 1.8e-36 156.0 103 77.7
Nitab4.5_0010364g0020 Nicotiana tabacum HOM05D006768 ORTHO05D008436 2.3e-36 155.6 103 77.7
Potri.002G086600 Populus trichocarpa HOM05D006768 ORTHO05D008436 3.1e-36 155.2 102 77.5
Solyc11g013100.2 Solanum lycopersicum HOM05D006768 ORTHO05D008436 3.1e-36 155.2 103 75.7
Sopen11g008160 Solanum pennellii HOM05D006768 ORTHO05D008436 3.1e-36 155.2 103 75.7
Gohir.D05G235400 Gossypium hirsutum HOM05D006768 ORTHO05D008436 5.2e-36 154.5 104 77.9
Hma1.2p1_0009F.1_g006320 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 5.2e-36 154.5 105 78.1
SalBow7G0914 Salvia bowleyana HOM05D006768 ORTHO05D008436 5.2e-36 154.5 104 74.0
SalBow7G4665 Salvia bowleyana HOM05D006768 ORTHO05D008436 5.2e-36 154.5 104 74.0
Nitab4.5_0005357g0030 Nicotiana tabacum HOM05D006768 ORTHO05D008436 6.8e-36 154.1 103 76.7
Potri.005G174700 Populus trichocarpa HOM05D006768 ORTHO05D008436 6.8e-36 154.1 102 77.5
Duzib116G0009 Durio zibethinus HOM05D006768 ORTHO05D008436 4.4e-35 151.4 102 77.5
COL.COLO4_38328 Corchorus olitorius HOM05D006768 ORTHO05D008436 7.6e-35 150.6 104 76.0
RhsimUnG0095400 Rhododendron simsii HOM05D006768 ORTHO05D008436 1.3e-34 149.8 103 79.6
Gohir.A05G233000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.7e-34 149.4 104 76.9
CSS0006116 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 2.9e-34 148.7 103 75.7
Gohir.D02G081200 Gossypium hirsutum HOM05D006768 ORTHO05D008436 2.9e-34 148.7 103 75.7
Cc10_g11060 Coffea canephora HOM05D006768 ORTHO05D008436 3.8e-34 148.3 105 73.3
Dinv27347 Davidia involucrata HOM05D006768 ORTHO05D008436 4.9e-34 147.9 102 76.5
Aqoxy6G00156 Aquilegia oxysepala HOM05D006768 ORTHO05D008436 6.4e-34 147.5 102 75.5
Thecc.08G120600 Theobroma cacao HOM05D006768 ORTHO05D008436 6.4e-34 147.5 103 74.8
CSS0001196 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 1.9e-33 146.0 104 77.9
CAN.G342.8 Capsicum annuum HOM05D006768 ORTHO05D008436 1.9e-33 146.0 103 74.8
Cpa.g.sc36.24 Carica papaya HOM05D006768 ORTHO05D008436 1.9e-33 146.0 104 74.0
Duzib041G0323 Durio zibethinus HOM05D006768 ORTHO05D008436 1.2e-32 143.3 103 73.8
TAR625G0411 Trochodendron aralioides HOM05D006768 ORTHO05D008436 1.2e-32 143.3 101 74.3
CiPaw.06G026900 Carya illinoinensis HOM05D006768 ORTHO05D008436 1.6e-32 142.9 109 74.3
PGSC0003DMG400014092 Solanum tuberosum HOM05D006768 ORTHO05D008436 1.6e-32 142.9 103 72.8
Sabra02G0068000 Salix brachista HOM05D006768 ORTHO05D008436 2.1e-32 142.5 86 82.6
MSTRG.25394 Avicennia marina HOM05D006768 ORTHO05D008436 3.5e-32 141.7 103 74.8
CAN.G2.37 Capsicum annuum HOM05D006768 ORTHO05D008436 3.5e-32 141.7 103 72.8
Gorai.005G090800 Gossypium raimondii HOM05D006768 ORTHO05D008436 6.0e-32 141.0 104 73.1
PGR044G1209 Punica granatum HOM05D006768 ORTHO05D008436 7.8e-32 140.6 103 72.8
GSVIVG01008909001 Vitis vinifera HOM05D006768 ORTHO05D008436 2.3e-31 139.0 102 71.6
Gorai.009G243700 Gossypium raimondii HOM05D006768 ORTHO05D008436 3.0e-31 138.7 86 82.6
Sabra05G0131800 Salix brachista HOM05D006768 ORTHO05D008436 3.0e-31 138.7 83 80.7
TAR376G1039 Trochodendron aralioides HOM05D000018 ORTHO05D001920 3.9e-31 138.3 84 83.3
arahy.Tifrunner.gnm1.ann1.BFT67J Arachis hypogaea HOM05D006768 ORTHO05D008436 5.1e-31 137.9 107 72.9
arahy.Tifrunner.gnm1.ann1.V4QE5E Arachis hypogaea HOM05D006768 ORTHO05D008436 5.1e-31 137.9 107 72.9
Atru.chr13.1393 Acer truncatum HOM05D006768 ORTHO05D008436 1.5e-30 136.3 106 71.7
MD08G1168400 Malus domestica HOM05D006768 ORTHO05D008436 1.5e-30 136.3 85 84.7
EL10Ac1g00013 Beta vulgaris HOM05D006768 ORTHO05D008436 4.3e-30 134.8 108 68.5
HanXRQChr08g0223691 Helianthus annuus HOM05D006768 ORTHO05D008436 4.3e-30 134.8 103 70.9
Gohir.A02G074000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 7.3e-30 134.0 103 70.9
Medtr5g059100 Medicago truncatula HOM05D006768 ORTHO05D008436 7.3e-30 134.0 105 72.4
Migut.C01157 Erythranthe guttata HOM05D006768 ORTHO05D008436 1.2e-29 133.3 104 71.2
TWI56G0584 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 1.2e-29 133.3 105 69.5
FvH4_2g26460 Fragaria vesca HOM05D006768 ORTHO05D008436 2.8e-29 132.1 103 71.8
FAN15G1404 Fragaria x ananassa HOM05D006768 ORTHO05D008436 2.8e-29 132.1 103 71.8
RcHm_v2.0_Chr6g0295131 Rosa chinensis HOM05D006768 ORTHO05D008436 2.8e-29 132.1 103 71.8
Eucgr.F04346 Eucalyptus grandis HOM05D006768 ORTHO05D008436 3.6e-29 131.7 84 83.3
Prupe.1G502600 Prunus persica HOM05D006768 ORTHO05D008436 4.7e-29 131.3 103 71.8
FAN24G3387 Fragaria x ananassa HOM05D006768 ORTHO05D008436 1.4e-28 129.8 103 70.9
Hma1.2p1_0073F.1_g038410 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 1.4e-28 129.8 102 69.6
Ciclev10002911m.g Citrus clementina HOM05D006768 ORTHO05D008436 1.8e-28 129.4 109 67.9
Haze_00489 Corylus avellana HOM05D006768 ORTHO05D008436 2.4e-28 129.0 77 87.0
Psat2g079320 Pisum sativum HOM05D006768 ORTHO05D008436 4.0e-28 128.3 103 70.9
Lsat_1_v5_gn_4_25061 Lactuca sativa HOM05D006768 ORTHO05D008436 2.0e-27 125.9 102 67.6
TPR.G8510 Trifolium pratense HOM05D006768 ORTHO05D008436 2.0e-27 125.9 102 67.6
unitig_21.g20584 Utricularia gibba HOM05D006768 ORTHO05D008436 9.9e-27 123.6 102 63.7
Phvul.008G165800 Phaseolus vulgaris HOM05D006768 ORTHO05D008436 1.3e-26 123.2 114 62.3
MBI06_g02573_MAGBIO Magnolia biondii HOM05D006768 ORTHO05D008436 3.8e-26 121.7 103 67.0
ECA234G1078 Erigeron canadensis HOM05D006768 ORTHO05D008436 1.1e-25 120.2 106 63.2
Lj1g0025240 Lotus japonicus HOM05D006768 ORTHO05D008436 1.1e-25 120.2 111 64.9
Glyma.13G082200 Glycine max HOM05D006768 ORTHO05D008436 7.1e-25 117.5 111 61.3
Lalb_Chr04g0253331 Lupinus albus HOM05D006768 ORTHO05D008436 7.1e-25 117.5 108 65.7
VMungo0647G1658 Vigna mungo HOM05D006768 ORTHO05D008436 7.1e-25 117.5 116 57.8
Glyma.14G163200 Glycine max HOM05D006768 ORTHO05D008436 9.3e-25 117.1 111 62.2
FAN20G0213 Fragaria x ananassa HOM05D000048 ORTHO05D004674 2.1e-24 115.9 84 75.0
CANSAT25G0473 Cannabis sativa HOM05D006768 ORTHO05D008436 2.7e-24 115.5 113 61.1
QL09p036660 Quercus lobata HOM05D006768 ORTHO05D008436 2.7e-24 115.5 107 62.6
AUR62004718 Chenopodium quinoa HOM05D006768 ORTHO05D008436 4.6e-24 114.8 109 61.5
ECA233G5727 Erigeron canadensis HOM05D006768 ORTHO05D008436 6.0e-24 114.4 102 62.7
Sc23g0000800 Simmondsia chinensis HOM05D006768 ORTHO05D008436 6.0e-24 114.4 91 70.3
CSS0018251 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 3.9e-23 111.7 80 76.2
BcaB01g02871 Brassica carinata HOM05D006768 ORTHO05D008436 1.1e-22 110.2 106 60.4
TWI12G0503 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 1.1e-22 110.2 106 61.3
HanXRQChr16g0527071 Helianthus annuus HOM05D006768 ORTHO05D008436 2.5e-22 109.0 102 60.8
Hund27041 Selenicereus undatus HOM05D006768 ORTHO05D008436 3.3e-22 108.6 110 60.0
Thhalv10029535m.g Eutrema salsugineum HOM05D006768 ORTHO05D008436 4.3e-22 108.2 106 58.5
PSO170G4432 Papaver somniferum HOM05D006768 ORTHO05D008436 7.3e-22 107.5 104 61.5
PSO528G0064 Papaver somniferum HOM05D006768 ORTHO05D008436 7.3e-22 107.5 104 61.5
THA.LOC104817125 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 1.3e-21 106.7 110 59.1
SGA_v2.0_scaffold24G10479 Striga asiatica HOM05D006768 ORTHO05D008436 2.8e-21 105.5 102 56.9
CDE04G1345 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 1.1e-20 103.6 102 54.9
Sp6g09840 Schrenkiella parvula HOM05D006768 ORTHO05D008436 1.4e-20 103.2 110 58.2
BcaC01g04777 Brassica carinata HOM05D006768 ORTHO05D008436 1.8e-20 102.8 108 58.3
A03p28000 Brassica napus HOM05D006768 ORTHO05D008436 1.8e-20 102.8 108 58.3
C03p33820 Brassica napus HOM05D006768 ORTHO05D008436 1.8e-20 102.8 108 58.3
BolC3t15699H Brassica oleracea HOM05D006768 ORTHO05D008436 1.8e-20 102.8 108 58.3
FAN27G1871 Fragaria x ananassa HOM05D000048 ORTHO05D004674 1.8e-20 102.8 78 73.1
BraA03t12013Z Brassica rapa HOM05D006768 ORTHO05D008436 2.4e-20 102.4 109 57.8
CARHR259330 Cardamine hirsuta HOM05D006768 ORTHO05D008436 4.0e-20 101.7 112 54.5
Peaxi162Scf00000g61010 Petunia axillaris HOM05D006768 ORTHO05D008436 9.0e-20 100.5 72 73.6
CDE08G1444 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 7.6e-19 97.4 106 54.7
AL6G41870 Arabidopsis lyrata HOM05D006768 ORTHO05D008436 8.4e-18 94.0 109 56.9
AT4G08230 Arabidopsis thaliana HOM05D006768 ORTHO05D008436 5.4e-17 91.3 116 51.7
THA.LOC104806813 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 5.4e-17 91.3 104 52.9
HPP92_011177 Vanilla planifolia HOM05D006768 ORTHO05D008436 5.4e-17 91.3 104 58.7
Zm00001eb398080 Zea mays HOM05D006768 ORTHO05D008436 5.4e-17 91.3 115 51.3
Carub.0006s2676 Capsella rubella HOM05D006768 ORTHO05D008436 1.2e-16 90.1 117 51.3
Os03g0263700 Oryza sativa ssp. japonica HOM05D006768 ORTHO05D008436 4.6e-16 88.2 111 53.2
Zm00001eb011610 Zea mays HOM05D006768 ORTHO05D008436 3.0e-15 85.5 114 50.9
Ca_28007_v3 Cicer arietinum L. HOM05D006768 ORTHO05D008436 3.9e-15 85.1 83 61.4
Nitab4.5_0001142g0120 Nicotiana tabacum HOM05D006768 ORTHO05D008436 8.7e-15 84.0 82 56.1
Sabra05G0131600 Salix brachista HOM05D006768 ORTHO05D008436 8.7e-15 84.0 56 75.0
SEGI_37020 Sequoiadendron giganteum HOM05D006768 ORTHO05D008436 8.7e-15 84.0 101 46.5
Aa31LG9G14330 Aethionema arabicum HOM05D006768 ORTHO05D008436 4.5e-11 71.6 82 56.1
Nn1g08704 Nelumbo nucifera HOM05D006768 ORTHO05D008436 4.5e-11 71.6 57 66.7
AUR62023633 Chenopodium quinoa HOM05D006768 ORTHO05D008436 2.9e-10 68.9 78 57.7
Mapoly0043s0020 Marchantia polymorpha HOM05D006768 ORTHO05D008436 9.3e-09 63.9 117 40.2
AagrBONN_evm.TU.Sc2ySwM_344.1603 Anthoceros agrestis HOM05D006768 ORTHO05D008436 7.9e-08 60.8 94 40.4
Pp3c13_12030 Physcomitrium patens HOM05D006768 ORTHO05D008436 8.7e-07 57.4 108 39.8


User provided reference genes

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