Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00759 Vaccinium macrocarpon HOM05D003442 ORTHO05D004005 4.2e-248 860.9 436 100.0
Rhsim09G0020400 Rhododendron simsii HOM05D003442 ORTHO05D004005 1.7e-47 194.5 221 53.4
vmacro12087 Vaccinium macrocarpon HOM05D003442 ORTHO05D004005 1.1e-41 175.3 90 93.3
Rhsim05G0022700 Rhododendron simsii HOM05D003442 ORTHO05D004005 2.0e-40 171.0 90 91.1
Actinidia07921 Actinidia chinensis HOM05D003442 ORTHO05D004005 3.4e-40 170.2 90 92.2
Actinidia31263 Actinidia chinensis HOM05D003442 ORTHO05D004005 3.4e-40 170.2 90 92.2
PSO017G5499 Papaver somniferum HOM05D003442 ORTHO05D004005 5.8e-40 169.5 118 72.0
PSO675G6803 Papaver somniferum HOM05D003442 ORTHO05D004005 5.8e-40 169.5 118 72.0
Manes.09G128600 Manihot esculenta HOM05D003442 ORTHO05D004005 9.9e-40 168.7 90 88.9
Potri.013G078700 Populus trichocarpa HOM05D003442 ORTHO05D004005 2.2e-39 167.5 90 88.9
Haze_00382 Corylus avellana HOM05D003442 ORTHO05D004005 2.9e-39 167.2 90 87.8
Lj4A843G12 Lonicera japonica HOM05D003442 ORTHO05D004005 3.8e-39 166.8 90 85.6
Cc09_g04230 Coffea canephora HOM05D003442 ORTHO05D004005 4.9e-39 166.4 90 87.8
MD07G1310400 Malus domestica HOM05D003442 ORTHO05D004005 4.9e-39 166.4 90 86.7
Cfa016067 Carpinus fangiana HOM05D003442 ORTHO05D004005 6.4e-39 166.0 90 86.7
Prupe.2G328400 Prunus persica HOM05D003442 ORTHO05D004005 6.4e-39 166.0 90 85.6
Duzib106G0604 Durio zibethinus HOM05D003442 ORTHO05D004005 8.4e-39 165.6 90 86.7
TAR636G2465 Trochodendron aralioides HOM05D003442 ORTHO05D004005 8.4e-39 165.6 90 86.7
MD01G1238500 Malus domestica HOM05D003442 ORTHO05D004005 1.1e-38 165.2 90 85.6
ATR0743G255 Amborella trichopoda HOM05D003442 ORTHO05D004005 2.4e-38 164.1 127 65.4
COL.COLO4_15183 Corchorus olitorius HOM05D003442 ORTHO05D004005 2.4e-38 164.1 90 85.6
DCAR_002085 Daucus carota HOM05D003442 ORTHO05D004005 2.4e-38 164.1 97 82.5
Ciclev10031531m.g Citrus clementina HOM05D003442 ORTHO05D004005 3.2e-38 163.7 90 84.4
Dinv17142 Davidia involucrata HOM05D003442 ORTHO05D004005 3.2e-38 163.7 90 88.9
TWI32G0704 Tripterygium wilfordii HOM05D003442 ORTHO05D004005 3.2e-38 163.7 90 84.4
Duzib177G0664 Durio zibethinus HOM05D003442 ORTHO05D004005 4.2e-38 163.3 90 84.4
FvH4_7g34170 Fragaria vesca HOM05D003442 ORTHO05D004005 4.2e-38 163.3 90 85.6
FAN01G2089 Fragaria x ananassa HOM05D003442 ORTHO05D004005 4.2e-38 163.3 90 85.6
FAN10G2135 Fragaria x ananassa HOM05D003442 ORTHO05D004005 4.2e-38 163.3 90 85.6
Gohir.D03G053800 Gossypium hirsutum HOM05D003442 ORTHO05D004005 5.4e-38 162.9 90 84.4
Gorai.003G056300 Gossypium raimondii HOM05D003442 ORTHO05D004005 5.4e-38 162.9 90 84.4
Peaxi162Scf01313g00235 Petunia axillaris HOM05D003442 ORTHO05D004005 5.4e-38 162.9 90 85.6
TAR365G0691 Trochodendron aralioides HOM05D003442 ORTHO05D004005 5.4e-38 162.9 90 85.6
Cpa.g.sc43.106 Carica papaya HOM05D003442 ORTHO05D004005 7.1e-38 162.5 90 83.3
Gohir.A02G127200 Gossypium hirsutum HOM05D003442 ORTHO05D004005 7.1e-38 162.5 90 84.4
Lalb_Chr09g0333641 Lupinus albus HOM05D003442 ORTHO05D004005 7.1e-38 162.5 90 86.7
Nn7g37514 Nelumbo nucifera HOM05D003442 ORTHO05D004005 7.1e-38 162.5 90 85.6
Thecc.05G221300 Theobroma cacao HOM05D003442 ORTHO05D004005 7.1e-38 162.5 90 85.6
MSTRG.344 Avicennia marina HOM05D003442 ORTHO05D004005 9.3e-38 162.2 90 84.4
CSS0045568 Camellia sinensis var. sinensis HOM05D003442 ORTHO05D004005 9.3e-38 162.2 90 86.7
Sc09g0001320 Simmondsia chinensis HOM05D003442 ORTHO05D004005 9.3e-38 162.2 90 84.4
Oeu007683.1 Olea europaea HOM05D003442 ORTHO05D004005 1.2e-37 161.8 90 86.7
arahy.Tifrunner.gnm1.ann1.I4HYIQ Arachis hypogaea HOM05D003442 ORTHO05D004005 1.6e-37 161.4 90 83.3
FAN03G3412 Fragaria x ananassa HOM05D003442 ORTHO05D004005 2.1e-37 161.0 90 84.4
Gohir.A08G221656 Gossypium hirsutum HOM05D003442 ORTHO05D004005 2.1e-37 161.0 90 82.2
Gohir.D08G241000 Gossypium hirsutum HOM05D003442 ORTHO05D004005 2.1e-37 161.0 90 82.2
RcHm_v2.0_Chr1g0384521 Rosa chinensis HOM05D003442 ORTHO05D004005 2.1e-37 161.0 90 83.3
TWI60G0615 Tripterygium wilfordii HOM05D003442 ORTHO05D004005 2.1e-37 161.0 90 84.4
Atru.chr12.1913 Acer truncatum HOM05D003442 ORTHO05D004005 2.7e-37 160.6 90 82.2
Gorai.004G256400 Gossypium raimondii HOM05D003442 ORTHO05D004005 2.7e-37 160.6 90 81.1
Potri.019G047800 Populus trichocarpa HOM05D003442 ORTHO05D004005 2.7e-37 160.6 90 83.3
SalBow1G1076 Salvia bowleyana HOM05D003442 ORTHO05D004005 3.5e-37 160.2 90 83.3
SalBow1G3564 Salvia bowleyana HOM05D003442 ORTHO05D004005 3.5e-37 160.2 90 83.3
VMungo0251G1146 Vigna mungo HOM05D003442 ORTHO05D004005 3.5e-37 160.2 90 83.3
Ca_22246_v3 Cicer arietinum L. HOM05D003442 ORTHO05D004005 4.6e-37 159.8 90 83.3
MBI07_g36707_MAGBIO Magnolia biondii HOM05D003442 ORTHO05D004005 4.6e-37 159.8 90 81.1
Glyma.16G142600 Glycine max HOM05D003442 ORTHO05D004005 6.0e-37 159.5 90 83.3
Lj2g0002798 Lotus japonicus HOM05D003442 ORTHO05D004005 6.0e-37 159.5 90 84.4
MBI07_g38305_MAGBIO Magnolia biondii HOM05D003442 ORTHO05D004005 6.0e-37 159.5 90 80.0
HanXRQChr13g0401211 Helianthus annuus HOM05D003442 ORTHO05D004005 7.9e-37 159.1 90 82.2
Aqoxy6G03064 Aquilegia oxysepala HOM05D003442 ORTHO05D004005 1.0e-36 158.7 90 81.1
Migut.F01837 Erythranthe guttata HOM05D003442 ORTHO05D004005 1.0e-36 158.7 90 83.3
Lalb_Chr05g0227421 Lupinus albus HOM05D003442 ORTHO05D004005 1.0e-36 158.7 90 82.2
Phvul.003G250932 Phaseolus vulgaris HOM05D003442 ORTHO05D004005 1.0e-36 158.7 90 83.3
ATR0794G121 Amborella trichopoda HOM05D003442 ORTHO05D004005 1.3e-36 158.3 92 79.3
BcaNung03800 Brassica carinata HOM05D003442 ORTHO05D004005 1.3e-36 158.3 127 63.0
A01p04260 Brassica napus HOM05D003442 ORTHO05D004005 1.3e-36 158.3 127 63.0
C01p04650 Brassica napus HOM05D003442 ORTHO05D004005 1.3e-36 158.3 127 63.0
BolC1t00448H Brassica oleracea HOM05D003442 ORTHO05D004005 1.3e-36 158.3 127 63.0
BraA01t00415Z Brassica rapa HOM05D003442 ORTHO05D004005 1.3e-36 158.3 127 63.0
Glyma.02G059800 Glycine max HOM05D003442 ORTHO05D004005 1.3e-36 158.3 90 82.2
Medtr8g078370 Medicago truncatula HOM05D003442 ORTHO05D004005 1.3e-36 158.3 90 82.2
SGA_v2.0_scaffold340G49316 Striga asiatica HOM05D003442 ORTHO05D007315 1.3e-36 158.3 90 83.3
GSVIVG01024344001 Vitis vinifera HOM05D003442 ORTHO05D004005 1.3e-36 158.3 90 82.2
CAN.G1610.2 Capsicum annuum HOM05D003442 ORTHO05D004005 1.7e-36 157.9 90 83.3
Solyc07g005940.4 Solanum lycopersicum HOM05D003442 ORTHO05D004005 1.7e-36 157.9 90 83.3
Sopen07g002070 Solanum pennellii HOM05D003442 ORTHO05D004005 1.7e-36 157.9 90 83.3
PGSC0003DMG401011206 Solanum tuberosum HOM05D003442 ORTHO05D004005 1.7e-36 157.9 90 83.3
SGA_v2.0_scaffold122G33217 Striga asiatica HOM05D003442 ORTHO05D004005 1.7e-36 157.9 90 82.2
AL5G22780 Arabidopsis lyrata HOM05D003442 ORTHO05D004005 2.3e-36 157.5 127 63.0
CsaV3_3G040000 Cucumis sativus L. HOM05D003442 ORTHO05D004005 2.3e-36 157.5 90 84.4
ECA233G0769 Erigeron canadensis HOM05D003442 ORTHO05D004005 2.3e-36 157.5 90 82.2
Lsat_1_v5_gn_6_25940 Lactuca sativa HOM05D003442 ORTHO05D004005 2.3e-36 157.5 90 82.2
Ciclev10032936m.g Citrus clementina HOM05D003442 ORTHO05D004005 3.0e-36 157.1 90 81.1
BraA03t15336Z Brassica rapa HOM05D003442 ORTHO05D004005 3.9e-36 156.8 220 45.0
Migut.F02084 Erythranthe guttata HOM05D003442 ORTHO05D004005 3.9e-36 156.8 90 82.2
Oeu001224.1 Olea europaea HOM05D003442 ORTHO05D004005 3.9e-36 156.8 90 81.1
PGR142G0137 Punica granatum HOM05D003442 ORTHO05D004005 3.9e-36 156.8 90 81.1
Sed0014541 Sechium edule HOM05D003442 ORTHO05D004005 3.9e-36 156.8 90 83.3
Sed0022579 Sechium edule HOM05D003442 ORTHO05D004005 3.9e-36 156.8 90 84.4
Sc16g0010680 Simmondsia chinensis HOM05D003442 ORTHO05D004005 3.9e-36 156.8 90 80.0
HPP92_007347 Vanilla planifolia HOM05D003442 ORTHO05D004005 3.9e-36 156.8 90 81.1
Carub.0007s0621 Capsella rubella HOM05D003442 ORTHO05D004005 5.1e-36 156.4 127 62.2
Eucgr.H02340 Eucalyptus grandis HOM05D003442 ORTHO05D004005 5.1e-36 156.4 90 82.2
Psat4g090760 Pisum sativum HOM05D003442 ORTHO05D004005 5.1e-36 156.4 90 80.0
MSTRG.8187 Avicennia marina HOM05D003442 ORTHO05D004005 6.6e-36 156.0 90 80.0
CiPaw.05G214600 Carya illinoinensis HOM05D003442 ORTHO05D004005 6.6e-36 156.0 90 80.0
Lj4g0025932 Lotus japonicus HOM05D003442 ORTHO05D004005 6.6e-36 156.0 90 81.1
Manes.08G064200 Manihot esculenta HOM05D003442 ORTHO05D004005 6.6e-36 156.0 90 83.3
Sp7g31930 Schrenkiella parvula HOM05D003442 ORTHO05D004005 6.6e-36 156.0 127 62.2
AT3G42050 Arabidopsis thaliana HOM05D003442 ORTHO05D004005 1.1e-35 155.2 127 62.2
BcaNung03365 Brassica carinata HOM05D003442 ORTHO05D004005 1.1e-35 155.2 127 62.2
A03p62660 Brassica napus HOM05D003442 ORTHO05D004005 1.1e-35 155.2 127 62.2
C07p60210 Brassica napus HOM05D003442 ORTHO05D004005 1.1e-35 155.2 127 62.2
BolC7t46462H Brassica oleracea HOM05D003442 ORTHO05D004005 1.1e-35 155.2 127 62.2
CANSAT21G2378 Cannabis sativa HOM05D003442 ORTHO05D004005 1.1e-35 155.2 90 82.2
MELO3C009742.2 Cucumis melo HOM05D003442 ORTHO05D004005 1.1e-35 155.2 90 83.3
PSO675G6576 Papaver somniferum HOM05D003442 ORTHO05D004005 1.1e-35 155.2 118 66.1
THA.LOC104804387 Tarenaya hassleriana HOM05D003442 ORTHO05D004005 1.1e-35 155.2 90 81.1
Ah.04g159350 Amaranthus hybridus HOM05D003442 ORTHO05D004005 1.5e-35 154.8 127 62.2
Lj2C606G3 Lonicera japonica HOM05D003442 ORTHO05D004005 1.5e-35 154.8 90 82.2
BcaB03g11847 Brassica carinata HOM05D003442 ORTHO05D004005 1.9e-35 154.5 127 60.6
AUR62000266 Chenopodium quinoa HOM05D003442 ORTHO05D004005 1.9e-35 154.5 90 80.0
Hund07385 Selenicereus undatus HOM05D003442 ORTHO05D004005 1.9e-35 154.5 90 81.1
EL10Ac4g10031 Beta vulgaris HOM05D003442 ORTHO05D004005 2.5e-35 154.1 90 78.9
AUR62006614 Chenopodium quinoa HOM05D003442 ORTHO05D004005 3.3e-35 153.7 90 80.0
QL09p021203 Quercus lobata HOM05D003442 ORTHO05D004005 3.3e-35 153.7 90 81.1
Aqoxy2G01953 Aquilegia oxysepala HOM05D003442 ORTHO05D004005 5.6e-35 152.9 90 78.9
AL7G17190 Arabidopsis lyrata HOM05D003442 ORTHO05D004005 5.6e-35 152.9 90 78.9
CARHR242660 Cardamine hirsuta HOM05D003442 ORTHO05D004005 5.6e-35 152.9 127 61.4
Peaxi162Scf00062g00013 Petunia axillaris HOM05D003442 ORTHO05D004005 5.6e-35 152.9 90 78.9
arahy.Tifrunner.gnm1.ann1.K5ZCN3 Arachis hypogaea HOM05D003442 ORTHO05D004005 9.6e-35 152.1 90 80.0
Thhalv10025183m.g Eutrema salsugineum HOM05D003442 ORTHO05D004005 9.6e-35 152.1 127 60.6
THA.LOC104819563 Tarenaya hassleriana HOM05D003442 ORTHO05D004005 1.3e-34 151.8 90 80.0
Nitab4.5_0002329g0200 Nicotiana tabacum HOM05D003442 ORTHO05D004005 1.6e-34 151.4 90 78.9
Nitab4.5_0008310g0020 Nicotiana tabacum HOM05D003442 ORTHO05D004005 1.6e-34 151.4 90 78.9
PGR042G1782 Punica granatum HOM05D003442 ORTHO05D004005 2.1e-34 151.0 90 80.0
SEGI_25036 Sequoiadendron giganteum HOM05D003442 ORTHO05D004005 2.8e-34 150.6 90 76.7
arahy.Tifrunner.gnm1.ann1.CZ7R53 Arachis hypogaea HOM05D003442 ORTHO05D004005 3.6e-34 150.2 90 78.9
BcaC01g00920 Brassica carinata HOM05D003442 ORTHO05D004005 3.6e-34 150.2 117 63.2
A08p17030 Brassica napus HOM05D003442 ORTHO05D004005 3.6e-34 150.2 127 59.8
C03p85940 Brassica napus HOM05D003442 ORTHO05D004005 3.6e-34 150.2 117 63.2
BraA08t33665Z Brassica rapa HOM05D003442 ORTHO05D004005 3.6e-34 150.2 127 59.8
unitig_61.g26274 Utricularia gibba HOM05D003442 ORTHO05D004005 3.6e-34 150.2 90 78.9
Aa31LG2G16640 Aethionema arabicum HOM05D003442 ORTHO05D004005 6.2e-34 149.4 90 77.8
CDE02G0117 Ceratophyllum demersum HOM05D003442 ORTHO05D004005 6.2e-34 149.4 90 76.7
Hund21933 Selenicereus undatus HOM05D003442 ORTHO05D004005 6.2e-34 149.4 97 74.2
Zm00001eb323620 Zea mays HOM05D003442 ORTHO05D004005 8.1e-34 149.1 90 76.7
DCAR_023762 Daucus carota HOM05D003442 ORTHO05D004005 1.1e-33 148.7 90 78.9
Sopen12g004770 Solanum pennellii HOM05D003442 ORTHO05D004005 2.4e-33 147.5 90 78.9
PGSC0003DMG400007911 Solanum tuberosum HOM05D003442 ORTHO05D004005 5.3e-33 146.4 90 77.8
SalBow3G0476 Salvia bowleyana HOM05D003442 ORTHO05D004005 9.0e-33 145.6 90 71.1
CDE02G3771 Ceratophyllum demersum HOM05D003442 ORTHO05D004005 2.6e-32 144.1 86 76.7
SGA_v2.0_scaffold83G26364 Striga asiatica HOM05D003442 ORTHO05D004005 2.2e-31 141.0 78 83.3
SMO361G0576 Selaginella moellendorffii HOM05D003442 ORTHO05D004005 2.9e-31 140.6 90 71.1
AagrBONN_evm.TU.Sc2ySwM_344.2700 Anthoceros agrestis HOM05D003442 ORTHO05D004005 2.4e-30 137.5 90 70.0
Pp3c1_26980 Physcomitrium patens HOM05D003442 ORTHO05D004005 5.5e-30 136.3 90 66.7
SHI02587 Sapria himalayana HOM05D003442 ORTHO05D004005 4.6e-29 133.3 111 61.3
Pp3c10_2890 Physcomitrium patens HOM05D003442 ORTHO05D004005 7.9e-29 132.5 90 65.6
Mapoly0102s0002 Marchantia polymorpha HOM05D003442 ORTHO05D004005 1.3e-26 125.2 90 62.2
CANSAT35G0263 Cannabis sativa HOM05D003442 ORTHO05D004005 4.8e-26 123.2 90 68.9
CANSAT35G0024 Cannabis sativa HOM05D003442 ORTHO05D004005 3.1e-25 120.6 90 67.8
Nitab4.5_0003759g0020 Nicotiana tabacum HOM05D003442 ORTHO05D004005 9.0e-25 119.0 64 82.8
Nitab4.5_0006810g0020 Nicotiana tabacum HOM05D003442 ORTHO05D004005 2.0e-24 117.9 61 86.9
CANSAT56G1635 Cannabis sativa HOM05D003442 ORTHO05D004005 5.8e-24 116.3 90 65.6
AagrBONN_evm.TU.Sc2ySwM_368.2763 Anthoceros agrestis HOM05D003442 ORTHO05D004005 1.6e-21 108.2 94 55.3
ClCG10G016340 Citrullus lanatus HOM05D003442 ORTHO05D004005 1.6e-21 108.2 63 81.0
Sed0024694 Sechium edule HOM05D003442 ORTHO05D004005 1.6e-21 108.2 90 65.6
Cre01.g027800 Chlamydomonas reinhardtii HOM05D003442 ORTHO05D004005 2.1e-21 107.8 90 54.4
AL5G22860 Arabidopsis lyrata HOM05D003442 ORTHO05D004005 6.0e-21 106.3 62 75.8
CDE04G3472 Ceratophyllum demersum HOM05D003442 ORTHO05D004005 5.9e-16 89.7 50 78.0
PRCOL_00001521 Prasinoderma coloniale HOM05D003442 ORTHO05D004005 1.3e-15 88.6 97 43.3
CBR_g3526 Chara braunii HOM05D003442 ORTHO05D004005 5.5e-14 83.2 62 58.1
vmacro18598 Vaccinium macrocarpon HOM05D005812 ORTHO05D007232 7.2e-14 82.8 56 64.3
MCO09G349 Micromonas commoda HOM05D003442 ORTHO05D004005 4.6e-13 80.1 90 44.4
Lsat_1_v5_gn_2_1040 Lactuca sativa HOM05D003442 ORTHO05D004005 6.7e-12 76.3 90 50.0
vmacro08911 Vaccinium macrocarpon HOM05D000003 ORTHO05D000006 6.7e-12 76.3 56 58.9
vmacro17797 Vaccinium macrocarpon HOM05D000003 ORTHO05D000007 1.9e-11 74.7 56 60.7
Solyc12g009890.3 Solanum lycopersicum HOM05D003442 ORTHO05D004005 6.3e-10 69.7 43 79.1
Cfa024478 Carpinus fangiana HOM05D003442 ORTHO05D122614 6.9e-09 66.2 96 38.5
vmacro00745 Vaccinium macrocarpon HOM05D000003 ORTHO05D000007 2.6e-08 64.3 70 44.3
vmacro04075 Vaccinium macrocarpon HOM05D000003 ORTHO05D000007 7.7e-08 62.8 50 56.0
Rhsim09G0081500 Rhododendron simsii HOM05D003919 ORTHO05D004906 2.9e-07 60.8 58 51.7


User provided reference genes

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