Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00751 Vaccinium macrocarpon HOM05D001035 ORTHO05D427120 1.1e-33 146.0 72 100.0
Dinv41743 Davidia involucrata HOM05D001035 ORTHO05D001045 3.1e-07 58.2 28 100.0
MD08G1219600 Malus domestica HOM05D001035 ORTHO05D001045 3.1e-07 58.2 28 100.0
MD15G1408200 Malus domestica HOM05D001035 ORTHO05D001045 3.1e-07 58.2 28 100.0
Manes.02G196600 Manihot esculenta HOM05D001035 ORTHO05D001045 3.1e-07 58.2 28 100.0
Sabra19G0091500 Salix brachista HOM05D001035 ORTHO05D001045 3.1e-07 58.2 28 100.0
Ciclev10000204m.g Citrus clementina HOM05D001035 ORTHO05D001045 4.1e-07 57.8 28 96.4
Migut.C01305 Erythranthe guttata HOM05D001035 ORTHO05D001045 4.1e-07 57.8 28 96.4
Glyma.08G238800 Glycine max HOM05D001035 ORTHO05D001045 4.1e-07 57.8 28 96.4
Glyma.12G001200 Glycine max HOM05D001035 ORTHO05D001045 4.1e-07 57.8 28 96.4
Lj3g0009046 Lotus japonicus HOM05D001035 ORTHO05D001045 4.1e-07 57.8 28 96.4
Phvul.011G001200 Phaseolus vulgaris HOM05D001035 ORTHO05D001045 4.1e-07 57.8 28 96.4
SHI09037 Sapria himalayana HOM05D001035 ORTHO05D001045 4.1e-07 57.8 29 89.7
SGA_v2.0_scaffold118G32518 Striga asiatica HOM05D001035 ORTHO05D001045 4.1e-07 57.8 28 96.4
SGA_v2.0_scaffold118G32529 Striga asiatica HOM05D001035 ORTHO05D001045 4.1e-07 57.8 28 96.4
Ca_19705_v3 Cicer arietinum L. HOM05D001035 ORTHO05D001045 5.3e-07 57.4 28 92.9
Eucgr.F03001 Eucalyptus grandis HOM05D001035 ORTHO05D001045 5.3e-07 57.4 28 92.9
Cc10_g10150 Coffea canephora HOM05D001035 ORTHO05D001045 6.9e-07 57.0 28 96.4
Gohir.A02G087300 Gossypium hirsutum HOM05D001035 ORTHO05D001045 6.9e-07 57.0 28 96.4
Gohir.D02G102100 Gossypium hirsutum HOM05D001035 ORTHO05D001045 6.9e-07 57.0 28 96.4
Gorai.005G115800 Gossypium raimondii HOM05D001035 ORTHO05D001045 6.9e-07 57.0 28 96.4
Prupe.1G552900 Prunus persica HOM05D001035 ORTHO05D001045 6.9e-07 57.0 28 96.4
THA.LOC104810575 Tarenaya hassleriana HOM05D001035 ORTHO05D001045 6.9e-07 57.0 28 96.4
TWI14G1389 Tripterygium wilfordii HOM05D001035 ORTHO05D001045 6.9e-07 57.0 28 96.4
CANSAT01G0217 Cannabis sativa HOM05D001035 ORTHO05D001045 9.1e-07 56.6 28 92.9
Peaxi162Scf00391g00737 Petunia axillaris HOM05D001035 ORTHO05D001045 9.1e-07 56.6 28 92.9
Potri.019G080300 Populus trichocarpa HOM05D001035 ORTHO05D001045 9.1e-07 56.6 28 96.4
SalBow7G3463 Salvia bowleyana HOM05D001035 ORTHO05D001045 9.1e-07 56.6 28 92.9
FvH4_5g32060 Fragaria vesca HOM05D001035 ORTHO05D001045 1.2e-06 56.2 28 96.4
FAN08G1353 Fragaria x ananassa HOM05D001035 ORTHO05D001045 1.2e-06 56.2 28 96.4
FAN18G0239 Fragaria x ananassa HOM05D001035 ORTHO05D001045 1.2e-06 56.2 28 96.4
Rhsim11G0054800 Rhododendron simsii HOM05D001035 ORTHO05D001045 1.2e-06 56.2 30 93.3
RcHm_v2.0_Chr7g0228111 Rosa chinensis HOM05D001035 ORTHO05D001045 1.2e-06 56.2 28 96.4
Sc26g0000520 Simmondsia chinensis HOM05D001035 ORTHO05D001045 1.2e-06 56.2 28 92.9
GSVIVG01036236001 Vitis vinifera HOM05D001035 ORTHO05D001045 1.2e-06 56.2 28 92.9
Atru.chr13.2382 Acer truncatum HOM05D001035 ORTHO05D001045 1.5e-06 55.8 28 92.9
Actinidia18883 Actinidia chinensis HOM05D001035 ORTHO05D001045 1.5e-06 55.8 28 92.9
AL1G36150 Arabidopsis lyrata HOM05D001035 ORTHO05D001045 1.5e-06 55.8 28 92.9
AT1G22620 Arabidopsis thaliana HOM05D001035 ORTHO05D001045 1.5e-06 55.8 28 92.9
BcaB03g11914 Brassica carinata HOM05D001035 ORTHO05D001045 1.5e-06 55.8 28 92.9
BcaB07g32272 Brassica carinata HOM05D001035 ORTHO05D001045 1.5e-06 55.8 28 92.9
BcaC07g39169 Brassica carinata HOM05D001035 ORTHO05D001045 1.5e-06 55.8 28 92.9
A08p28460 Brassica napus HOM05D001035 ORTHO05D001045 1.5e-06 55.8 28 92.9
C08p21620 Brassica napus HOM05D001035 ORTHO05D001045 1.5e-06 55.8 28 92.9
BolC8t49800H Brassica oleracea HOM05D001035 ORTHO05D001045 1.5e-06 55.8 28 92.9
BraA08t34775Z Brassica rapa HOM05D001035 ORTHO05D001045 1.5e-06 55.8 28 92.9
Carub.0001s2213 Capsella rubella HOM05D001035 ORTHO05D001045 1.5e-06 55.8 28 92.9
Thhalv10006740m.g Eutrema salsugineum HOM05D001035 ORTHO05D001045 1.5e-06 55.8 28 92.9
Lj3A34G36 Lonicera japonica HOM05D001035 ORTHO05D001045 1.5e-06 55.8 28 96.4
Medtr4g032925 Medicago truncatula HOM05D001035 ORTHO05D001045 1.5e-06 55.8 28 92.9
Sp1g20130 Schrenkiella parvula HOM05D001035 ORTHO05D001045 1.5e-06 55.8 28 92.9
TAR381G0676 Trochodendron aralioides HOM05D001035 ORTHO05D001045 1.5e-06 55.8 28 89.3
AUR62004617 Chenopodium quinoa HOM05D001035 ORTHO05D001045 2.0e-06 55.5 28 89.3
CsaV3_2G033000 Cucumis sativus L. HOM05D001035 ORTHO05D001045 2.0e-06 55.5 42 69.0
Potri.013G107950 Populus trichocarpa HOM05D001035 ORTHO05D001045 2.0e-06 55.5 28 96.4
PGR042G2161 Punica granatum HOM05D001035 ORTHO05D001045 2.0e-06 55.5 28 92.9
TPR.G34169 Trifolium pratense HOM05D001035 ORTHO05D001045 2.0e-06 55.5 30 86.7
VMungo1127G0841 Vigna mungo HOM05D001035 ORTHO05D001045 2.0e-06 55.5 28 92.9
Aa31LG7G6510 Aethionema arabicum HOM05D001035 ORTHO05D001045 2.6e-06 55.1 28 92.9
CAN.G102.3 Capsicum annuum HOM05D001035 ORTHO05D001045 2.6e-06 55.1 28 92.9
MELO3C008069.2 Cucumis melo HOM05D001035 ORTHO05D001045 2.6e-06 55.1 42 66.7
Duzib116G0807 Durio zibethinus HOM05D001035 ORTHO05D001045 2.6e-06 55.1 28 92.9
Lalb_Chr01g0000111 Lupinus albus HOM05D001035 ORTHO05D001045 2.6e-06 55.1 28 92.9
Psat7g225720 Pisum sativum HOM05D001035 ORTHO05D001045 2.6e-06 55.1 27 96.3
Thecc.08G188300 Theobroma cacao HOM05D001035 ORTHO05D001045 2.6e-06 55.1 28 92.9
Actinidia35139 Actinidia chinensis HOM05D001035 ORTHO05D001045 3.4e-06 54.7 28 89.3
AUR62022644 Chenopodium quinoa HOM05D001035 ORTHO05D001045 3.4e-06 54.7 28 85.7
DCAR_011522 Daucus carota HOM05D001035 ORTHO05D001045 3.4e-06 54.7 28 85.7
Nn3g18383 Nelumbo nucifera HOM05D001035 ORTHO05D001045 3.4e-06 54.7 28 85.7
Hund27102 Selenicereus undatus HOM05D001035 ORTHO05D001045 3.4e-06 54.7 28 85.7
Solyc11g022380.3 Solanum lycopersicum HOM05D001035 ORTHO05D001045 3.4e-06 54.7 28 89.3
Sopen11g011250 Solanum pennellii HOM05D001035 ORTHO05D001045 3.4e-06 54.7 28 89.3
ATR0693G444 Amborella trichopoda HOM05D001035 ORTHO05D001045 4.5e-06 54.3 28 89.3
Lsat_1_v5_gn_1_12260 Lactuca sativa HOM05D001035 ORTHO05D001045 4.5e-06 54.3 28 85.7
Medtr4g032935 Medicago truncatula HOM05D001035 ORTHO05D001045 4.5e-06 54.3 34 73.5
Oeu013894.4 Olea europaea HOM05D001035 ORTHO05D001045 4.5e-06 54.3 27 88.9
HPP92_001194 Vanilla planifolia HOM05D001035 ORTHO05D001045 4.5e-06 54.3 28 85.7
CiPaw.08G002100 Carya illinoinensis HOM05D001035 ORTHO05D001045 5.9e-06 53.9 30 86.7
Sed0015270 Sechium edule HOM05D001035 ORTHO05D001045 5.9e-06 53.9 42 69.0
DCAR_001460 Daucus carota HOM05D001035 ORTHO05D001045 7.7e-06 53.5 28 85.7
HanXRQChr02g0044241 Helianthus annuus HOM05D001035 ORTHO05D001045 7.7e-06 53.5 28 78.6
Nitab4.5_0002013g0020 Nicotiana tabacum HOM05D001035 ORTHO05D001045 7.7e-06 53.5 30 83.3


User provided reference genes

Program Settings