Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00740 Vaccinium macrocarpon HOM05D001207 ORTHO05D426826 2.7e-59 231.9 124 100.0
Rhsim11G0052100 Rhododendron simsii HOM05D001207 ORTHO05D007056 1.4e-23 113.2 127 64.6
Rhsim11G0052000 Rhododendron simsii HOM05D001207 ORTHO05D007056 7.0e-23 110.9 125 59.2
Actinidia29405 Actinidia chinensis HOM05D001207 ORTHO05D007056 1.3e-13 80.1 121 49.6
CSS0049684 Camellia sinensis var. sinensis HOM05D001207 ORTHO05D007056 1.2e-11 73.6 127 46.5
Lj7C286G4 Lonicera japonica HOM05D001207 ORTHO05D007056 2.6e-09 65.9 55 61.8
Ah.05g178730 Amaranthus hybridus HOM05D001207 ORTHO05D007056 3.4e-09 65.5 94 45.7
MD15G1404700 Malus domestica HOM05D001207 ORTHO05D007056 3.4e-09 65.5 87 50.6
RcHm_v2.0_Chr7g0226671 Rosa chinensis HOM05D001207 ORTHO05D007056 9.8e-09 63.9 110 41.8
Potri.019G078200 Populus trichocarpa HOM05D001207 ORTHO05D007056 1.3e-08 63.5 81 46.9
Cfa012981 Carpinus fangiana HOM05D001207 ORTHO05D007056 2.8e-08 62.4 43 69.8
THA.LOC104807203 Tarenaya hassleriana HOM05D001207 ORTHO05D007056 3.7e-08 62.0 41 70.7
Haze_21345 Corylus avellana HOM05D001207 ORTHO05D007056 4.9e-08 61.6 43 69.8
Haze_21351 Corylus avellana HOM05D001207 ORTHO05D007056 4.9e-08 61.6 43 69.8
Potri.013G103400 Populus trichocarpa HOM05D001207 ORTHO05D007056 4.9e-08 61.6 81 48.1
CAN.G1647.6 Capsicum annuum HOM05D001207 ORTHO05D007056 6.3e-08 61.2 88 44.3
Gorai.009G290700 Gossypium raimondii HOM05D001207 ORTHO05D007056 6.3e-08 61.2 59 62.7
Hund16768 Selenicereus undatus HOM05D001207 ORTHO05D007056 1.4e-07 60.1 70 50.0
SGA_v2.0_scaffold118G32543 Striga asiatica HOM05D001207 ORTHO05D007056 1.8e-07 59.7 36 77.8
FvH4_5g31400 Fragaria vesca HOM05D001207 ORTHO05D007056 3.1e-07 58.9 111 40.5
FAN18G0437 Fragaria x ananassa HOM05D001207 ORTHO05D007056 3.1e-07 58.9 111 40.5
Gohir.A05G275600 Gossypium hirsutum HOM05D001207 ORTHO05D007056 3.1e-07 58.9 59 61.0
Gohir.D05G277700 Gossypium hirsutum HOM05D001207 ORTHO05D007056 3.1e-07 58.9 59 61.0
Lsat_1_v5_gn_1_9700 Lactuca sativa HOM05D001207 ORTHO05D007056 4.1e-07 58.5 45 64.4
Sc23g0001590 Simmondsia chinensis HOM05D001207 ORTHO05D007056 4.1e-07 58.5 63 54.0
PGSC0003DMG400013933 Solanum tuberosum HOM05D001207 ORTHO05D007056 4.1e-07 58.5 99 39.4
Migut.C01276 Erythranthe guttata HOM05D001207 ORTHO05D007056 5.4e-07 58.2 47 63.8
Oeu064083.1 Olea europaea HOM05D001207 ORTHO05D007056 5.4e-07 58.2 100 46.0
Prupe.1G556600 Prunus persica HOM05D001207 ORTHO05D007056 5.4e-07 58.2 95 45.3
CANSAT25G2196 Cannabis sativa HOM05D001207 ORTHO05D007056 7.0e-07 57.8 116 39.7
CiPaw.07G234600 Carya illinoinensis HOM05D001207 ORTHO05D007056 7.0e-07 57.8 116 34.5
Rhsim03G0254100 Rhododendron simsii HOM05D001207 ORTHO05D009015 7.0e-07 57.8 56 55.4
Solyc06g065270.4 Solanum lycopersicum HOM05D001207 ORTHO05D007056 9.2e-07 57.4 122 40.2
Sopen06g023770 Solanum pennellii HOM05D001207 ORTHO05D007056 9.2e-07 57.4 122 40.2
unitig_26.g9919 Utricularia gibba HOM05D000062 ORTHO05D006089 9.2e-07 57.4 45 62.2
Nitab4.5_0001579g0020 Nicotiana tabacum HOM05D001207 ORTHO05D007056 1.2e-06 57.0 98 38.8
Cc10_g11290 Coffea canephora HOM05D001207 ORTHO05D007056 1.6e-06 56.6 41 63.4
FAN08G3308 Fragaria x ananassa HOM05D001207 ORTHO05D007056 1.6e-06 56.6 111 41.4
FAN19G3000 Fragaria x ananassa HOM05D001207 ORTHO05D009015 2.0e-06 56.2 94 44.7
Hma1.2p1_0342F.1_g130690 Hydrangea macrophylla HOM05D001207 ORTHO05D007056 2.0e-06 56.2 126 42.1
PGSC0003DMG400026110 Solanum tuberosum HOM05D001207 ORTHO05D007056 2.0e-06 56.2 120 39.2
Atru.chr7.251 Acer truncatum HOM05D001207 ORTHO05D009015 3.5e-06 55.5 74 48.6
FAN23G1325 Fragaria x ananassa HOM05D001207 ORTHO05D009015 3.5e-06 55.5 94 44.7
FAN26G2247 Fragaria x ananassa HOM05D001207 ORTHO05D009015 3.5e-06 55.5 94 44.7
Sp2g18340 Schrenkiella parvula HOM05D001207 ORTHO05D007056 3.5e-06 55.5 47 57.4
Sopen11g010480 Solanum pennellii HOM05D001207 ORTHO05D007056 3.5e-06 55.5 99 38.4
MSTRG.1532 Avicennia marina HOM05D001207 ORTHO05D007056 4.5e-06 55.1 97 40.2
CDE05G1386 Ceratophyllum demersum HOM05D001207 ORTHO05D007056 4.5e-06 55.1 33 75.8
CDE05G3333 Ceratophyllum demersum HOM05D001207 ORTHO05D007056 4.5e-06 55.1 33 75.8
MSTRG.25453 Avicennia marina HOM05D001207 ORTHO05D007056 5.9e-06 54.7 92 39.1
ECA153G0018 Erigeron canadensis HOM05D000006 ORTHO05D000001 5.9e-06 54.7 43 62.8
Lalb_Chr23g0275791 Lupinus albus HOM05D001207 ORTHO05D009015 5.9e-06 54.7 92 39.1
Peaxi162Scf00391g00320 Petunia axillaris HOM05D001207 ORTHO05D007056 5.9e-06 54.7 33 72.7
RcHm_v2.0_Chr7g0223711 Rosa chinensis HOM05D001207 ORTHO05D007056 5.9e-06 54.7 34 73.5
Aa31LG3G14110 Aethionema arabicum HOM05D001207 ORTHO05D007056 7.7e-06 54.3 30 80.0
Ah.11g040880 Amaranthus hybridus HOM05D001207 ORTHO05D009015 7.7e-06 54.3 97 41.2
A09p04250 Brassica napus HOM05D001207 ORTHO05D007056 7.7e-06 54.3 93 40.9
BraA09t36062Z Brassica rapa HOM05D001207 ORTHO05D007056 7.7e-06 54.3 93 40.9
PGR142G3550 Punica granatum HOM05D001207 ORTHO05D009015 7.7e-06 54.3 96 46.9
QL02p023752 Quercus lobata HOM05D001207 ORTHO05D007056 7.7e-06 54.3 39 71.8


User provided reference genes

Program Settings