Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro00725 Vaccinium macrocarpon HOM05D007257 ORTHO05D008924 1.8e-66 255.8 124 100.0
Rhsim09G0003000 Rhododendron simsii HOM05D007257 ORTHO05D008924 3.0e-42 175.3 124 72.6
Rhsim09G0003300 Rhododendron simsii HOM05D007257 ORTHO05D008924 1.7e-40 169.5 121 71.9
QL10p064610 Quercus lobata HOM05D007257 ORTHO05D008924 8.8e-18 94.0 125 44.0
QL10p065732 Quercus lobata HOM05D007257 ORTHO05D008924 8.8e-18 94.0 125 44.0
Haze_11125 Corylus avellana HOM05D007257 ORTHO05D008924 1.3e-16 90.1 125 47.2
PGR042G0806 Punica granatum HOM05D007257 ORTHO05D008924 3.7e-16 88.6 131 45.0
Nitab4.5_0001110g0010 Nicotiana tabacum HOM05D007257 ORTHO05D008924 1.4e-15 86.7 126 46.8
Sopen12g032450 Solanum pennellii HOM05D007257 ORTHO05D008924 2.4e-15 85.9 124 44.4
PGSC0003DMG400029271 Solanum tuberosum HOM05D007257 ORTHO05D008924 2.4e-15 85.9 124 43.5
SalBow3G3102 Salvia bowleyana HOM05D007257 ORTHO05D008924 3.1e-15 85.5 130 43.8
Dinv24749 Davidia involucrata HOM05D007257 ORTHO05D008924 4.1e-15 85.1 107 44.9
Ciclev10022922m.g Citrus clementina HOM05D007257 ORTHO05D008924 7.0e-15 84.3 132 40.2
Migut.N03023 Erythranthe guttata HOM05D007257 ORTHO05D008924 1.6e-14 83.2 125 46.4
SGA_v2.0_scaffold12G06221 Striga asiatica HOM05D007257 ORTHO05D008924 1.6e-14 83.2 121 43.0
Nitab4.5_0000160g0050 Nicotiana tabacum HOM05D007257 ORTHO05D008924 2.0e-14 82.8 124 44.4
Peaxi162Scf00169g00094 Petunia axillaris HOM05D007257 ORTHO05D008924 2.7e-14 82.4 125 45.6
Actinidia18394 Actinidia chinensis HOM05D008933 ORTHO05D011098 3.5e-14 82.0 115 47.0
CiPaw.01G202100 Carya illinoinensis HOM05D007257 ORTHO05D008924 3.5e-14 82.0 129 41.1
Migut.G00917 Erythranthe guttata HOM05D007257 ORTHO05D008924 5.9e-14 81.3 122 43.4
Thecc.05G001300 Theobroma cacao HOM05D007257 ORTHO05D008924 7.7e-14 80.9 125 47.2
Glyma.05G198900 Glycine max HOM05D007257 ORTHO05D008924 1.3e-13 80.1 129 41.1
Atru.chr3.1975 Acer truncatum HOM05D007257 ORTHO05D008924 2.2e-13 79.3 123 39.0
Lj1g0006483 Lotus japonicus HOM05D007257 ORTHO05D008924 3.8e-13 78.6 131 40.5
TWI15G0669 Tripterygium wilfordii HOM05D007257 ORTHO05D008924 3.8e-13 78.6 124 40.3
Lalb_Chr11g0068971 Lupinus albus HOM05D007257 ORTHO05D008924 6.5e-13 77.8 124 41.1
Lalb_Chr12g0202631 Lupinus albus HOM05D007257 ORTHO05D008924 6.5e-13 77.8 127 39.4
COL.COLO4_14410 Corchorus olitorius HOM05D007257 ORTHO05D008924 1.1e-12 77.0 123 48.0
Cfa008520 Carpinus fangiana HOM05D007257 ORTHO05D008924 1.9e-12 76.3 126 46.0
Gohir.D09G190900 Gossypium hirsutum HOM05D007257 ORTHO05D008924 1.9e-12 76.3 121 43.8
Gorai.006G213700 Gossypium raimondii HOM05D007257 ORTHO05D008924 1.9e-12 76.3 121 43.8
Eucgr.A00421 Eucalyptus grandis HOM05D007257 ORTHO05D008924 5.5e-12 74.7 122 34.4
SGA_v2.0_scaffold25G11017 Striga asiatica HOM05D007257 ORTHO05D008924 5.5e-12 74.7 124 40.3
Gohir.A09G196300 Gossypium hirsutum HOM05D007257 ORTHO05D008924 7.2e-12 74.3 121 43.0
Nn7g37449 Nelumbo nucifera HOM05D007257 ORTHO05D008924 7.2e-12 74.3 122 41.0
Nn1g09433 Nelumbo nucifera HOM05D007257 ORTHO05D008924 9.4e-12 73.9 123 40.7
Oeu018062.1 Olea europaea HOM05D007257 ORTHO05D008924 9.4e-12 73.9 128 42.2
Phvul.009G159100 Phaseolus vulgaris HOM05D007257 ORTHO05D008924 1.2e-11 73.6 129 37.2
CiPaw.02G125200 Carya illinoinensis HOM05D007257 ORTHO05D008924 1.6e-11 73.2 96 46.9
Glyma.06G162400 Glycine max HOM05D007257 ORTHO05D008924 1.6e-11 73.2 130 38.5
Manes.01G009800 Manihot esculenta HOM05D007257 ORTHO05D008924 1.6e-11 73.2 123 43.1
Sp5g03270 Schrenkiella parvula HOM05D007257 ORTHO05D008924 2.1e-11 72.8 129 38.0
THA.LOC104827561 Tarenaya hassleriana HOM05D007257 ORTHO05D008924 3.6e-11 72.0 130 38.5
Aa31LG1G25680 Aethionema arabicum HOM05D007257 ORTHO05D008924 6.1e-11 71.2 125 38.4
Potri.017G002100 Populus trichocarpa HOM05D007257 ORTHO05D008924 8.0e-11 70.9 116 42.2
Potri.007G145500 Populus trichocarpa HOM05D007257 ORTHO05D008924 1.4e-10 70.1 116 41.4
Manes.05G207200 Manihot esculenta HOM05D007257 ORTHO05D008924 4.0e-10 68.6 124 40.3
Hma1.2p1_1782F.1_g302120 Hydrangea macrophylla HOM05D007257 ORTHO05D008924 5.2e-10 68.2 92 43.5
Carub.0005s2662 Capsella rubella HOM05D007257 ORTHO05D008924 6.8e-10 67.8 132 35.6
Glyma.04G203100 Glycine max HOM05D007257 ORTHO05D008924 6.8e-10 67.8 128 39.8
Peaxi162Scf00057g00224 Petunia axillaris HOM05D007257 ORTHO05D008924 1.5e-09 66.6 122 40.2
Dinv33249 Davidia involucrata HOM05D008933 ORTHO05D011098 2.0e-09 66.2 91 44.0
AT3G59880 Arabidopsis thaliana HOM05D007257 ORTHO05D008924 2.6e-09 65.9 131 36.6
EL10Ac3g06173 Beta vulgaris HOM05D007257 ORTHO05D008924 2.6e-09 65.9 133 36.8
C04p04930 Brassica napus HOM05D007257 ORTHO05D008924 3.4e-09 65.5 129 34.9
A05p04160 Brassica napus HOM05D007257 ORTHO05D008924 4.4e-09 65.1 129 34.1
BraA05t19402Z Brassica rapa HOM05D007257 ORTHO05D008924 4.4e-09 65.1 129 34.1
AUR62002488 Chenopodium quinoa HOM05D007257 ORTHO05D008924 4.4e-09 65.1 129 35.7
Sabra07G0115500 Salix brachista HOM05D007257 ORTHO05D008924 4.4e-09 65.1 116 38.8
BolC4t22123H Brassica oleracea HOM05D007257 ORTHO05D008924 5.7e-09 64.7 129 34.1
Medtr3g098390 Medicago truncatula HOM05D007257 ORTHO05D008924 5.7e-09 64.7 124 37.1
BcaC02g12345 Brassica carinata HOM05D007257 ORTHO05D008924 7.5e-09 64.3 129 34.1
Sopen12g009180 Solanum pennellii HOM05D007257 ORTHO05D008924 7.5e-09 64.3 121 37.2
ECA233G4211 Erigeron canadensis HOM05D007257 ORTHO05D008924 1.3e-08 63.5 126 36.5
Psat5g055880 Pisum sativum HOM05D007257 ORTHO05D008924 1.3e-08 63.5 123 35.0
PGSC0003DMG400020384 Solanum tuberosum HOM05D007257 ORTHO05D008924 1.3e-08 63.5 121 38.0
Solyc12g017960.1 Solanum lycopersicum HOM05D007257 ORTHO05D008924 1.7e-08 63.2 121 37.2
AT2G44010 Arabidopsis thaliana HOM05D007257 ORTHO05D008924 2.8e-08 62.4 129 33.3
A09p52160 Brassica napus HOM05D007257 ORTHO05D008924 3.7e-08 62.0 137 33.6
BraA09t40647Z Brassica rapa HOM05D007257 ORTHO05D008924 3.7e-08 62.0 137 33.6
Sp4g26100 Schrenkiella parvula HOM05D007257 ORTHO05D008924 3.7e-08 62.0 128 33.6
DCAR_023792 Daucus carota HOM05D007257 ORTHO05D008924 6.3e-08 61.2 129 34.9
AL4G42890 Arabidopsis lyrata HOM05D007257 ORTHO05D008924 8.3e-08 60.8 129 34.1
BcaC07g40438 Brassica carinata HOM05D007257 ORTHO05D008924 8.3e-08 60.8 130 35.4
CARHR139190 Cardamine hirsuta HOM05D007257 ORTHO05D008924 8.3e-08 60.8 129 32.6
Prupe.7G270300 Prunus persica HOM05D007257 ORTHO05D008924 8.3e-08 60.8 160 33.8
AL5G42000 Arabidopsis lyrata HOM05D007257 ORTHO05D008924 1.4e-07 60.1 131 33.6
CARHR170210 Cardamine hirsuta HOM05D007257 ORTHO05D008924 1.4e-07 60.1 131 35.9
BcaC07g40552 Brassica carinata HOM05D007257 ORTHO05D008924 1.8e-07 59.7 137 32.8
C08p34830 Brassica napus HOM05D007257 ORTHO05D008924 1.8e-07 59.7 137 32.8
CANSAT01G1842 Cannabis sativa HOM05D007257 ORTHO05D008924 2.4e-07 59.3 136 37.5
Carub.0004s2657 Capsella rubella HOM05D007257 ORTHO05D008924 2.4e-07 59.3 129 32.6
Sc13g0007600 Simmondsia chinensis HOM05D007257 ORTHO05D008924 2.4e-07 59.3 131 35.1
Thhalv10001750m.g Eutrema salsugineum HOM05D007257 ORTHO05D008924 3.1e-07 58.9 128 32.0
Phvul.002G279900 Phaseolus vulgaris HOM05D007257 ORTHO05D008924 4.1e-07 58.5 122 35.2
Glyma.08G006200 Glycine max HOM05D007257 ORTHO05D008924 5.4e-07 58.2 126 34.9
BolC8t51085H Brassica oleracea HOM05D007257 ORTHO05D008924 7.0e-07 57.8 137 32.1
Ah.07g203290 Amaranthus hybridus HOM05D007257 ORTHO05D008924 9.2e-07 57.4 143 32.2
Thhalv10006503m.g Eutrema salsugineum HOM05D007257 ORTHO05D008924 1.2e-06 57.0 132 34.1
TAR365G0873 Trochodendron aralioides HOM05D007257 ORTHO05D008924 2.0e-06 56.2 119 34.5
BcaB02g08925 Brassica carinata HOM05D007257 ORTHO05D008924 2.7e-06 55.8 129 31.8
Aa31LG10G14120 Aethionema arabicum HOM05D007257 ORTHO05D008924 4.5e-06 55.1 119 36.1
Lsat_1_v5_gn_6_63300 Lactuca sativa HOM05D008933 ORTHO05D011098 7.7e-06 54.3 122 33.6


User provided reference genes

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